RNA–Protein interactions for RNA: ENSMUST00000117940.1

Hmgb1-rs18-201, mousemouse

BASIC

Gene Hmgb1-rs18, Length 627 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-rs18-201ENSMUST00000117940 Lrp1Q91ZX7 4545 aaKnown RBP1.14□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Stab2Q8R4U0 2559 aa1.13□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Gm17606F6ZL36 78 aa1.13□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Mycbp2Q7TPH6 4711 aa1.13□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Ryr1E9PZQ0 5035 aa1.12□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Krtap19-5O08632 62 aa1.12□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Sprr2dO70555 85 aa1.12□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Pkd1l1Q8R526 2615 aa1.11□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Defb38Q7TNV7 63 aa1.11□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 HrnrQ8VHD8 2496 aa1.11□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Vps13bQ80TY5 3993 aa1.1□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 2310046K23RikA0A0A6YVW6 87 aa1.1□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Lce3bQ9CQM7 98 aa1.1□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Birc6O88738 4882 aa1.1□□□□□ -2.23
Hmgb1-rs18-201ENSMUST00000117940 Dnhd1D3Z2X2 4750 aa1.09□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 FasnP19096 2504 aaKnown RBP1.09□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 Abca13Q5SSE9 5034 aa1.08□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 Herc2Q4U2R1 4836 aa1.05□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 Kiaa1109A2AAE1 5005 aa1.05□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 Gm10999F6Q4M4 69 aa1.05□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 Defb1P56386 69 aa1.05□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 Rps29P62274 56 aa1.04□□□□□ -2.24
Hmgb1-rs18-201ENSMUST00000117940 Lrp2A2ARV4 4660 aa1.02□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 Sprr2iO70560 76 aa1.02□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 HydinQ80W93 5154 aa1.01□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 Spink7Q6IE32 76 aa1.01□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 Krtap19-1Q925H2 87 aa1□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 Gm19426M0QWC7 77 aa0.99□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 Herc1E9PZP8 4859 aa0.99□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 PcloQ9QYX7 5068 aa0.98□□□□□ -2.25
Hmgb1-rs18-201ENSMUST00000117940 Hmcn1D3YXG0 5634 aa0.96□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Hmcn2A2AJ76 5100 aa0.95□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Sprr2fO70557 76 aa0.94□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Tnp1P10856 55 aa0.94□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Gm9789Q8BIG3 52 aa0.93□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 ZanO88799 5376 aa0.93□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Ush2AQ2QI47 5193 aa0.93□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 SspoQ8CG65 4998 aa0.92□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Ubr4A2AN08 5180 aa0.91□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 4932415D10RikA0A1W2P6U8 4986 aa0.91□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Gm7735D3YX18 52 aa0.91□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Fat4Q2PZL6 4981 aa0.91□□□□□ -2.26
Hmgb1-rs18-201ENSMUST00000117940 Rnf213E9Q555 5152 aaKnown RBP0.89□□□□□ -2.27
Hmgb1-rs18-201ENSMUST00000117940 Prm1P02319 51 aa0.88□□□□□ -2.27
Hmgb1-rs18-201ENSMUST00000117940 BC029722A0A0N4SW31 51 aa0.87□□□□□ -2.27
Hmgb1-rs18-201ENSMUST00000117940 Gm17402F6Z0L5 76 aa0.85□□□□□ -2.27
Hmgb1-rs18-201ENSMUST00000117940 Krtap19-4Q925H7 84 aa0.84□□□□□ -2.27
Hmgb1-rs18-201ENSMUST00000117940 Krtap19-9aF8WH65 55 aa0.83□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 Muc5bE9Q5I3 4800 aa0.82□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 Gm10061D3Z714 54 aa0.82□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 ObscnA2AAJ9 8891 aaKnown RBP0.81□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 Gm6358A0A087WPH4 74 aa0.8□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 Sprr2kO70562 68 aa0.8□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 Krtap8-1O08633 61 aa0.79□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 Mt2P02798 61 aa0.78□□□□□ -2.28
Hmgb1-rs18-201ENSMUST00000117940 Krtap19-9bQ99NG9 58 aa0.76□□□□□ -2.29
Hmgb1-rs18-201ENSMUST00000117940 Sprr2eO70556 76 aa0.75□□□□□ -2.29
Hmgb1-rs18-201ENSMUST00000117940 Syne1Q6ZWR6 8799 aa0.71□□□□□ -2.3
Hmgb1-rs18-201ENSMUST00000117940 Krtap22-2J3QNX6 67 aa0.71□□□□□ -2.3
Hmgb1-rs18-201ENSMUST00000117940 Sprr2gO70558 76 aa0.69□□□□□ -2.3
Hmgb1-rs18-201ENSMUST00000117940 Gm11938Q9D3H4 131 aa0.67□□□□□ -2.3
Hmgb1-rs18-201ENSMUST00000117940 Mdn1A2ANY6 5589 aaKnown RBP0.67□□□□□ -2.3
Hmgb1-rs18-201ENSMUST00000117940 Sprr2hO70559 108 aa0.65□□□□□ -2.31
Hmgb1-rs18-201ENSMUST00000117940 Mt4P47945 62 aa0.65□□□□□ -2.31
Hmgb1-rs18-201ENSMUST00000117940 Syne2Q6ZWQ0 6874 aaKnown RBP0.63□□□□□ -2.31
Hmgb1-rs18-201ENSMUST00000117940 Gpr98Q8VHN7 6298 aaKnown RBP0.63□□□□□ -2.31
Hmgb1-rs18-201ENSMUST00000117940 DstQ91ZU6 7393 aaKnown RBP0.62□□□□□ -2.31
Hmgb1-rs18-201ENSMUST00000117940 Krtap20-2E9Q0A8 60 aa0.59□□□□□ -2.31
Hmgb1-rs18-201ENSMUST00000117940 Mt1P02802 61 aaKnown RBP0.59□□□□□ -2.31
Hmgb1-rs18-201ENSMUST00000117940 Fsip2A2ARZ3 6995 aa0.58□□□□□ -2.32
Hmgb1-rs18-201ENSMUST00000117940 Krtap6-3A0A087WQL6 57 aa0.56□□□□□ -2.32
Hmgb1-rs18-201ENSMUST00000117940 Macf1Q9QXZ0 7354 aaKnown RBP0.47□□□□□ -2.33
Hmgb1-rs18-201ENSMUST00000117940 Muc16A0A140LJ72 8478 aa0.46□□□□□ -2.34
Hmgb1-rs18-201ENSMUST00000117940 Sprr2bO70554 98 aa0.45□□□□□ -2.34
Hmgb1-rs18-201ENSMUST00000117940 Eppk1Q8R0W0 6548 aa0.42□□□□□ -2.34
Hmgb1-rs18-201ENSMUST00000117940 NebE9Q1W3 7152 aa0.41□□□□□ -2.34
Hmgb1-rs18-201ENSMUST00000117940 Muc19Q6PZE0 7524 aa0.4□□□□□ -2.34
Hmgb1-rs18-201ENSMUST00000117940 AhnakE9Q616 5656 aaKnown RBP0.4□□□□□ -2.35
Hmgb1-rs18-201ENSMUST00000117940 Gm11639A0A1D5RLM8 5808 aa0.39□□□□□ -2.35
Hmgb1-rs18-201ENSMUST00000117940 Phgr1Q8K0G7 91 aa0.36□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 299.4 ms