RNA–Protein interactions for RNA: ENSMUST00000051408.7

Clrn1-201, Transcript of Clarin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-201ENSMUST00000051408 Sprr2a1Q9CQK8 83 aa3.81□□□□□ -1.8
Clrn1-201ENSMUST00000051408 Gm10160F6Y577 67 aa3.8□□□□□ -1.8
Clrn1-201ENSMUST00000051408 Ndufc1Q9CQY9 76 aa3.8□□□□□ -1.8
Clrn1-201ENSMUST00000051408 SptssbQ925E8 76 aa3.74□□□□□ -1.81
Clrn1-201ENSMUST00000051408 Krtap19-9bQ99NG9 58 aa3.69□□□□□ -1.82
Clrn1-201ENSMUST00000051408 Syne1Q6ZWR6 8799 aa3.68□□□□□ -1.82
Clrn1-201ENSMUST00000051408 Atox1O08997 68 aaKnown RBP3.68□□□□□ -1.82
Clrn1-201ENSMUST00000051408 Hmcn1D3YXG0 5634 aa3.67□□□□□ -1.82
Clrn1-201ENSMUST00000051408 NebE9Q1W3 7152 aa3.65□□□□□ -1.83
Clrn1-201ENSMUST00000051408 Gm10229O08631 77 aa3.64□□□□□ -1.83
Clrn1-201ENSMUST00000051408 DstQ91ZU6 7393 aaKnown RBP3.63□□□□□ -1.83
Clrn1-201ENSMUST00000051408 Gm17402F6Z0L5 76 aa3.59□□□□□ -1.83
Clrn1-201ENSMUST00000051408 Lce3bQ9CQM7 98 aa3.58□□□□□ -1.84
Clrn1-201ENSMUST00000051408 Coa6Q8BGD8 79 aa3.53□□□□□ -1.84
Clrn1-201ENSMUST00000051408 Gtf2h5Q8K2X8 71 aa3.53□□□□□ -1.84
Clrn1-201ENSMUST00000051408 Camk2n1Q6QWF9 78 aa3.45□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Krtap19-4Q925H7 84 aa3.44□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Krtap4-16Q91W93 202 aa3.43□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Gm40460A0A1B0GR10 244 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Krtap5-5Q2TA51 241 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Gm9955Q8CEJ8 102 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 H2al1mQ9DAD9 105 aa3.42□□□□□ -1.86
Clrn1-201ENSMUST00000051408 4930518I15RikQ3V2W7 57 aa3.41□□□□□ -1.86
Clrn1-201ENSMUST00000051408 AhnakE9Q616 5656 aaKnown RBP3.4□□□□□ -1.86
Clrn1-201ENSMUST00000051408 Coa5Q99M07 74 aa3.4□□□□□ -1.87
Clrn1-201ENSMUST00000051408 Sec61gP60060 68 aa3.37□□□□□ -1.87
Clrn1-201ENSMUST00000051408 B230307C23RikQ8BLB2 64 aa3.37□□□□□ -1.87
Clrn1-201ENSMUST00000051408 Serp1Q9Z1W5 66 aa3.37□□□□□ -1.87
Clrn1-201ENSMUST00000051408 Gm20661K7N787 53 aa3.33□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Smim20D3Z7Q2 69 aa3.32□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Pxt1Q8K459 51 aa3.31□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Krtap6-5Q925H3 78 aa3.31□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Sprr2fO70557 76 aa3.3□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Gm11938Q9D3H4 131 aa3.3□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Mt1P02802 61 aaKnown RBP3.29□□□□□ -1.88
Clrn1-201ENSMUST00000051408 Lce3eF8VQJ0 98 aa3.26□□□□□ -1.89
Clrn1-201ENSMUST00000051408 Serp2Q6TAW2 65 aa3.24□□□□□ -1.89
Clrn1-201ENSMUST00000051408 H2al1aQ5M8Q2 105 aa3.17□□□□□ -1.9
Clrn1-201ENSMUST00000051408 H2al1eQ810S6 105 aa3.17□□□□□ -1.9
Clrn1-201ENSMUST00000051408 Atp5eP56382 52 aa3.11□□□□□ -1.91
Clrn1-201ENSMUST00000051408 Uqcr11Q9CPX8 56 aa3.1□□□□□ -1.91
Clrn1-201ENSMUST00000051408 Fam240bJ3QMB3 78 aa3.06□□□□□ -1.92
Clrn1-201ENSMUST00000051408 Pcp4l1Q6W8Q3 68 aa3.06□□□□□ -1.92
Clrn1-201ENSMUST00000051408 4933428G20RikQ9D3X4 101 aa3.05□□□□□ -1.92
Clrn1-201ENSMUST00000051408 H2al1bA0A087WP11 105 aa3.02□□□□□ -1.93
Clrn1-201ENSMUST00000051408 Ndufb1P0DN34 57 aa3.02□□□□□ -1.93
Clrn1-201ENSMUST00000051408 SnurfQ9WU12 71 aa2.98□□□□□ -1.93
Clrn1-201ENSMUST00000051408 4933415A04RikQ9D443 101 aa2.96□□□□□ -1.94
Clrn1-201ENSMUST00000051408 ObscnA2AAJ9 8891 aaKnown RBP2.94□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Cdc42se1Q8BHL7 80 aa2.93□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Smlr1J3QMJ4 66 aa2.92□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Phxr4P15974 95 aa2.92□□□□□ -1.94
Clrn1-201ENSMUST00000051408 Gm3880A0A1B0GSB3 72 aa2.9□□□□□ -1.95
Clrn1-201ENSMUST00000051408 Pet100P0DJE0 76 aa2.88□□□□□ -1.95
Clrn1-201ENSMUST00000051408 Anapc13Q8R034 74 aa2.87□□□□□ -1.95
Clrn1-201ENSMUST00000051408 Krtap6-2O08884 159 aa2.78□□□□□ -1.96
Clrn1-201ENSMUST00000051408 Sprr2eO70556 76 aa2.73□□□□□ -1.97
Clrn1-201ENSMUST00000051408 Tnp1P10856 55 aa2.7□□□□□ -1.98
Clrn1-201ENSMUST00000051408 Gm12216A0A1W2P827 62 aa2.68□□□□□ -1.98
Clrn1-201ENSMUST00000051408 H2al1kJ3QP08 105 aa2.66□□□□□ -1.98
Clrn1-201ENSMUST00000051408 Rps28P62858 69 aaKnown RBP2.66□□□□□ -1.98
Clrn1-201ENSMUST00000051408 Sprr2hO70559 108 aa2.64□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Muc16A0A140LJ72 8478 aa2.63□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Tmem258P61166 79 aa2.63□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Brk1Q91VR8 75 aa2.61□□□□□ -1.99
Clrn1-201ENSMUST00000051408 Gm10024A0A0A0MQA4 119 aa2.57□□□□□ -2
Clrn1-201ENSMUST00000051408 Romo1P60603 79 aa2.56□□□□□ -2
Clrn1-201ENSMUST00000051408 Gm19935A0A1B0GSF9 52 aa2.55□□□□□ -2
Clrn1-201ENSMUST00000051408 1110025L11RikO09048 78 aa2.51□□□□□ -2.01
Clrn1-201ENSMUST00000051408 Krtap21-1Q925H4 128 aa2.5□□□□□ -2.01
Clrn1-201ENSMUST00000051408 Ndufs5Q99LY9 106 aa2.45□□□□□ -2.02
Clrn1-201ENSMUST00000051408 Sprr2dO70555 85 aa2.42□□□□□ -2.02
Clrn1-201ENSMUST00000051408 Gm10337F7DEP7 55 aa2.39□□□□□ -2.03
Clrn1-201ENSMUST00000051408 Gm40193A0A1B0GT39 78 aa2.35□□□□□ -2.03
Clrn1-201ENSMUST00000051408 Ndufaf8A2AMZ4 74 aa2.26□□□□□ -2.05
Clrn1-201ENSMUST00000051408 Gm20538F6Z9R1 75 aa2.13□□□□□ -2.07
Clrn1-201ENSMUST00000051408 Sprr2bO70554 98 aa2.06□□□□□ -2.08
Clrn1-201ENSMUST00000051408 Gm9112A2AI92 75 aa1.8□□□□□ -2.12
Clrn1-201ENSMUST00000051408 Mp68P56379 58 aa1.78□□□□□ -2.12
Clrn1-201ENSMUST00000051408 Phgr1Q8K0G7 91 aa1.5□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 66.3 ms