RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Mp68P56379 58 aa10.63□□□□□ -0.71
Trim9-208ENSMUST00000221370 Gm20538F6Z9R1 75 aa10.63□□□□□ -0.71
Trim9-208ENSMUST00000221370 Abca13Q5SSE9 5034 aa10.56□□□□□ -0.72
Trim9-208ENSMUST00000221370 Ryr1E9PZQ0 5035 aa10.54□□□□□ -0.72
Trim9-208ENSMUST00000221370 B930094E09RikQ8C4T2 136 aa10.39□□□□□ -0.75
Trim9-208ENSMUST00000221370 Gm19426M0QWC7 77 aa10.37□□□□□ -0.75
Trim9-208ENSMUST00000221370 Gm21887J3QQ04 176 aa10.36□□□□□ -0.75
Trim9-208ENSMUST00000221370 BC029722A0A0N4SW31 51 aa10.35□□□□□ -0.75
Trim9-208ENSMUST00000221370 Krtap13-1Q8K198 168 aa10.27□□□□□ -0.77
Trim9-208ENSMUST00000221370 Dnhd1D3Z2X2 4750 aa10.25□□□□□ -0.77
Trim9-208ENSMUST00000221370 Gm17402F6Z0L5 76 aa10.23□□□□□ -0.77
Trim9-208ENSMUST00000221370 2310057N15RikQ9D6T8 200 aa10.1□□□□□ -0.79
Trim9-208ENSMUST00000221370 Krtap1-5A2A590 122 aa10.09□□□□□ -0.79
Trim9-208ENSMUST00000221370 Sec61bQ9CQS8 96 aaKnown RBP10.06□□□□□ -0.8
Trim9-208ENSMUST00000221370 Kiaa1109A2AAE1 5005 aa10.05□□□□□ -0.8
Trim9-208ENSMUST00000221370 Herc2Q4U2R1 4836 aa10.04□□□□□ -0.8
Trim9-208ENSMUST00000221370 Krtap7-1Q9D3I6 87 aa9.99□□□□□ -0.81
Trim9-208ENSMUST00000221370 Birc6O88738 4882 aa9.96□□□□□ -0.82
Trim9-208ENSMUST00000221370 Lrp2A2ARV4 4660 aa9.91□□□□□ -0.82
Trim9-208ENSMUST00000221370 HydinQ80W93 5154 aa9.9□□□□□ -0.83
Trim9-208ENSMUST00000221370 Gm40193A0A1B0GT39 78 aa9.88□□□□□ -0.83
Trim9-208ENSMUST00000221370 Gm19402J3QJV4 266 aa9.88□□□□□ -0.83
Trim9-208ENSMUST00000221370 Sprr2a3Q4KL71 83 aa9.87□□□□□ -0.83
Trim9-208ENSMUST00000221370 Sprr2a1Q9CQK8 83 aa9.87□□□□□ -0.83
Trim9-208ENSMUST00000221370 Ndufaf8A2AMZ4 74 aa9.83□□□□□ -0.84
Trim9-208ENSMUST00000221370 Fam229aB2KGE5 128 aa9.75□□□□□ -0.85
Trim9-208ENSMUST00000221370 Spink7Q6IE32 76 aa9.69□□□□□ -0.86
Trim9-208ENSMUST00000221370 Krtap16-3Q8C1I6 86 aa9.68□□□□□ -0.86
Trim9-208ENSMUST00000221370 Krtap19-1Q925H2 87 aa9.55□□□□□ -0.88
Trim9-208ENSMUST00000221370 Prm2P07978 107 aa9.55□□□□□ -0.88
Trim9-208ENSMUST00000221370 Crct1Q6PAI5 102 aa9.45□□□□□ -0.9
Trim9-208ENSMUST00000221370 Gm10318A0A1W2P728 225 aa9.45□□□□□ -0.9
Trim9-208ENSMUST00000221370 Krtap19-3Q925H6 87 aa9.45□□□□□ -0.9
Trim9-208ENSMUST00000221370 Gm19668J3QMD1 248 aa9.44□□□□□ -0.9
Trim9-208ENSMUST00000221370 Krtap1-4Q3V2D6 188 aa9.4□□□□□ -0.9
Trim9-208ENSMUST00000221370 Camk2n1Q6QWF9 78 aa9.39□□□□□ -0.91
Trim9-208ENSMUST00000221370 PcloQ9QYX7 5068 aa9.34□□□□□ -0.91
Trim9-208ENSMUST00000221370 Herc1E9PZP8 4859 aa9.25□□□□□ -0.93
Trim9-208ENSMUST00000221370 4932415D10RikA0A1W2P6U8 4986 aa9.03□□□□□ -0.96
Trim9-208ENSMUST00000221370 Gm9112A2AI92 75 aa8.98□□□□□ -0.97
Trim9-208ENSMUST00000221370 ZanO88799 5376 aa8.98□□□□□ -0.97
Trim9-208ENSMUST00000221370 Lce1jD3YUU5 139 aa8.94□□□□□ -0.98
Trim9-208ENSMUST00000221370 Tnp1P10856 55 aa8.94□□□□□ -0.98
Trim9-208ENSMUST00000221370 Krtap19-9aF8WH65 55 aa8.92□□□□□ -0.98
Trim9-208ENSMUST00000221370 Krtap12-1Q9Z287 130 aa8.91□□□□□ -0.98
Trim9-208ENSMUST00000221370 Krtap1-3A2A588 173 aa8.88□□□□□ -0.99
Trim9-208ENSMUST00000221370 Hmcn2A2AJ76 5100 aa8.81□□□□□ -1
Trim9-208ENSMUST00000221370 Ubr4A2AN08 5180 aa8.79□□□□□ -1
Trim9-208ENSMUST00000221370 Fat4Q2PZL6 4981 aa8.79□□□□□ -1
Trim9-208ENSMUST00000221370 Lce1mQ9CR91 182 aa8.78□□□□□ -1
Trim9-208ENSMUST00000221370 Ush2AQ2QI47 5193 aa8.75□□□□□ -1.01
Trim9-208ENSMUST00000221370 Krtap8-1O08633 61 aa8.66□□□□□ -1.02
Trim9-208ENSMUST00000221370 LorP18165 486 aa8.65□□□□□ -1.02
Trim9-208ENSMUST00000221370 2310046K23RikA0A0A6YVW6 87 aa8.55□□□□□ -1.04
Trim9-208ENSMUST00000221370 Rnf213E9Q555 5152 aaKnown RBP8.55□□□□□ -1.04
Trim9-208ENSMUST00000221370 Gm9789Q8BIG3 52 aa8.51□□□□□ -1.05
Trim9-208ENSMUST00000221370 Krtap19-9bQ99NG9 58 aa8.49□□□□□ -1.05
Trim9-208ENSMUST00000221370 Lce1iQ9D6P5 149 aa8.41□□□□□ -1.06
Trim9-208ENSMUST00000221370 Krtap17-1A2A5X6 109 aa8.38□□□□□ -1.07
Trim9-208ENSMUST00000221370 Lce1a2Q9D1K4 149 aa8.35□□□□□ -1.07
Trim9-208ENSMUST00000221370 Krtap19-2Q925I0 141 aa8.33□□□□□ -1.08
Trim9-208ENSMUST00000221370 Prm1P02319 51 aa8.32□□□□□ -1.08
Trim9-208ENSMUST00000221370 SspoQ8CG65 4998 aa8.29□□□□□ -1.08
Trim9-208ENSMUST00000221370 Gm18596A0A1W2P860 280 aa8.25□□□□□ -1.09
Trim9-208ENSMUST00000221370 Gm7735D3YX18 52 aa8.24□□□□□ -1.09
Trim9-208ENSMUST00000221370 Krtap9-5A2A5X3 358 aa8.24□□□□□ -1.09
Trim9-208ENSMUST00000221370 Krtap9-3Q3V2C1 136 aa8.14□□□□□ -1.11
Trim9-208ENSMUST00000221370 Lce1hQ9D6R3 140 aa8.07□□□□□ -1.12
Trim9-208ENSMUST00000221370 Mt2P02798 61 aa7.82□□□□□ -1.16
Trim9-208ENSMUST00000221370 Gm6358A0A087WPH4 74 aa7.78□□□□□ -1.16
Trim9-208ENSMUST00000221370 Muc5bE9Q5I3 4800 aa7.78□□□□□ -1.16
Trim9-208ENSMUST00000221370 Gm10061D3Z714 54 aa7.7□□□□□ -1.18
Trim9-208ENSMUST00000221370 Lce1dQ9D731 133 aa7.64□□□□□ -1.19
Trim9-208ENSMUST00000221370 Sprr2gO70558 76 aa7.61□□□□□ -1.19
Trim9-208ENSMUST00000221370 4933428G20RikQ9D3X4 101 aa7.52□□□□□ -1.21
Trim9-208ENSMUST00000221370 Sprr2dO70555 85 aa7.47□□□□□ -1.21
Trim9-208ENSMUST00000221370 Gm11938Q9D3H4 131 aa7.42□□□□□ -1.22
Trim9-208ENSMUST00000221370 Lce1eQ9D139 143 aa7.39□□□□□ -1.23
Trim9-208ENSMUST00000221370 Krtap22-2J3QNX6 67 aa7.35□□□□□ -1.23
Trim9-208ENSMUST00000221370 Gm10272F7CZ33 110 aa7.28□□□□□ -1.24
Trim9-208ENSMUST00000221370 Gm11562A0PK51 136 aa7.18□□□□□ -1.26
Trim9-208ENSMUST00000221370 Gm11569B1AQB1 180 aa7.06□□□□□ -1.28
Trim9-208ENSMUST00000221370 Lce1cQ9D1C5 147 aa7□□□□□ -1.29
Trim9-208ENSMUST00000221370 Krtap19-4Q925H7 84 aa6.96□□□□□ -1.29
Trim9-208ENSMUST00000221370 Mdn1A2ANY6 5589 aaKnown RBP6.85□□□□□ -1.31
Trim9-208ENSMUST00000221370 Gm10100J3QK64 120 aa6.84□□□□□ -1.31
Trim9-208ENSMUST00000221370 Lce3bQ9CQM7 98 aa6.81□□□□□ -1.32
Trim9-208ENSMUST00000221370 Lce1fB9EJP6 147 aa6.73□□□□□ -1.33
Trim9-208ENSMUST00000221370 Lce1a1Q9CQH5 143 aa6.73□□□□□ -1.33
Trim9-208ENSMUST00000221370 Gm10142J3KMP7 120 aa6.72□□□□□ -1.33
Trim9-208ENSMUST00000221370 Syne1Q6ZWR6 8799 aa6.65□□□□□ -1.35
Trim9-208ENSMUST00000221370 Sprr2iO70560 76 aa6.62□□□□□ -1.35
Trim9-208ENSMUST00000221370 Sprr2hO70559 108 aa6.53□□□□□ -1.36
Trim9-208ENSMUST00000221370 Lce3cQ91V05 98 aa6.51□□□□□ -1.37
Trim9-208ENSMUST00000221370 Lce3dE9Q8V1 98 aa6.47□□□□□ -1.37
Trim9-208ENSMUST00000221370 Sprr2eO70556 76 aa6.43□□□□□ -1.38
Trim9-208ENSMUST00000221370 Sprr2kO70562 68 aa6.37□□□□□ -1.39
Trim9-208ENSMUST00000221370 Krtap4-6Q3V4B7 195 aa6.37□□□□□ -1.39
Trim9-208ENSMUST00000221370 Lce3eF8VQJ0 98 aa6.36□□□□□ -1.39
Trim9-208ENSMUST00000221370 Lce3fQ6PAI4 98 aa6.36□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms