RNA–Protein interactions for RNA: ENSMUST00000175898.3

Six3-202, Transcript of Homeobox protein SIX3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Six3, Length 2,419 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six3-202ENSMUST00000175898 Abca13Q5SSE9 5034 aa13.48□□□□□ -0.25
Six3-202ENSMUST00000175898 Gm19426M0QWC7 77 aa13.45□□□□□ -0.26
Six3-202ENSMUST00000175898 Mycbp2Q7TPH6 4711 aa13.43□□□□□ -0.26
Six3-202ENSMUST00000175898 Dnah8Q91XQ0 4731 aa13.42□□□□□ -0.26
Six3-202ENSMUST00000175898 Gm5965D3Z724 196 aa13.41□□□□□ -0.26
Six3-202ENSMUST00000175898 B930094E09RikQ8C4T2 136 aa13.39□□□□□ -0.27
Six3-202ENSMUST00000175898 Ndufaf8A2AMZ4 74 aa13.37□□□□□ -0.27
Six3-202ENSMUST00000175898 2210017I01RikA0A0A6YVV1 95 aa13.35□□□□□ -0.27
Six3-202ENSMUST00000175898 Krtap7-1Q9D3I6 87 aa13.23□□□□□ -0.29
Six3-202ENSMUST00000175898 Prm2P07978 107 aa13.23□□□□□ -0.29
Six3-202ENSMUST00000175898 BC029722A0A0N4SW31 51 aa13.05□□□□□ -0.32
Six3-202ENSMUST00000175898 Herc2Q4U2R1 4836 aa12.99□□□□□ -0.33
Six3-202ENSMUST00000175898 Kiaa1109A2AAE1 5005 aa12.99□□□□□ -0.33
Six3-202ENSMUST00000175898 Gm17402F6Z0L5 76 aa12.96□□□□□ -0.33
Six3-202ENSMUST00000175898 Gm40193A0A1B0GT39 78 aa12.94□□□□□ -0.34
Six3-202ENSMUST00000175898 Fam229aB2KGE5 128 aa12.88□□□□□ -0.35
Six3-202ENSMUST00000175898 Dnhd1D3Z2X2 4750 aa12.88□□□□□ -0.35
Six3-202ENSMUST00000175898 HydinQ80W93 5154 aa12.84□□□□□ -0.35
Six3-202ENSMUST00000175898 Krtap13-1Q8K198 168 aa12.83□□□□□ -0.36
Six3-202ENSMUST00000175898 Birc6O88738 4882 aa12.8□□□□□ -0.36
Six3-202ENSMUST00000175898 Gm19402J3QJV4 266 aa12.74□□□□□ -0.37
Six3-202ENSMUST00000175898 Gm19668J3QMD1 248 aa12.69□□□□□ -0.38
Six3-202ENSMUST00000175898 2310057N15RikQ9D6T8 200 aa12.66□□□□□ -0.38
Six3-202ENSMUST00000175898 Lrp2A2ARV4 4660 aa12.65□□□□□ -0.38
Six3-202ENSMUST00000175898 Krtap1-5A2A590 122 aa12.52□□□□□ -0.41
Six3-202ENSMUST00000175898 Sprr2a3Q4KL71 83 aa12.51□□□□□ -0.41
Six3-202ENSMUST00000175898 Sprr2a1Q9CQK8 83 aa12.51□□□□□ -0.41
Six3-202ENSMUST00000175898 PcloQ9QYX7 5068 aa12.45□□□□□ -0.42
Six3-202ENSMUST00000175898 Gm9112A2AI92 75 aa12.27□□□□□ -0.44
Six3-202ENSMUST00000175898 Spink7Q6IE32 76 aa12.23□□□□□ -0.45
Six3-202ENSMUST00000175898 Sec61bQ9CQS8 96 aaKnown RBP12.23□□□□□ -0.45
Six3-202ENSMUST00000175898 Camk2n1Q6QWF9 78 aa12.01□□□□□ -0.49
Six3-202ENSMUST00000175898 Herc1E9PZP8 4859 aa11.98□□□□□ -0.49
Six3-202ENSMUST00000175898 Crct1Q6PAI5 102 aa11.94□□□□□ -0.5
Six3-202ENSMUST00000175898 Gm10318A0A1W2P728 225 aa11.93□□□□□ -0.5
Six3-202ENSMUST00000175898 Krtap16-3Q8C1I6 86 aa11.92□□□□□ -0.5
Six3-202ENSMUST00000175898 Lce1mQ9CR91 182 aa11.77□□□□□ -0.53
Six3-202ENSMUST00000175898 Krtap19-1Q925H2 87 aa11.76□□□□□ -0.53
Six3-202ENSMUST00000175898 Krtap19-3Q925H6 87 aa11.69□□□□□ -0.54
Six3-202ENSMUST00000175898 Krtap1-4Q3V2D6 188 aa11.64□□□□□ -0.55
Six3-202ENSMUST00000175898 Tnp1P10856 55 aa11.56□□□□□ -0.56
Six3-202ENSMUST00000175898 Ush2AQ2QI47 5193 aa11.49□□□□□ -0.57
Six3-202ENSMUST00000175898 ZanO88799 5376 aa11.42□□□□□ -0.58
Six3-202ENSMUST00000175898 Hmcn2A2AJ76 5100 aa11.42□□□□□ -0.58
Six3-202ENSMUST00000175898 Ubr4A2AN08 5180 aa11.42□□□□□ -0.58
Six3-202ENSMUST00000175898 Krtap1-3A2A588 173 aa11.37□□□□□ -0.59
Six3-202ENSMUST00000175898 4932415D10RikA0A1W2P6U8 4986 aa11.34□□□□□ -0.59
Six3-202ENSMUST00000175898 Gm18596A0A1W2P860 280 aa11.24□□□□□ -0.61
Six3-202ENSMUST00000175898 Gm9789Q8BIG3 52 aa11.15□□□□□ -0.62
Six3-202ENSMUST00000175898 Fat4Q2PZL6 4981 aa11.14□□□□□ -0.63
Six3-202ENSMUST00000175898 LorP18165 486 aa11.12□□□□□ -0.63
Six3-202ENSMUST00000175898 Lce1jD3YUU5 139 aa11.09□□□□□ -0.63
Six3-202ENSMUST00000175898 2310046K23RikA0A0A6YVW6 87 aa11.03□□□□□ -0.64
Six3-202ENSMUST00000175898 Krtap19-9aF8WH65 55 aa10.99□□□□□ -0.65
Six3-202ENSMUST00000175898 Prm1P02319 51 aa10.97□□□□□ -0.65
Six3-202ENSMUST00000175898 Krtap12-1Q9Z287 130 aa10.95□□□□□ -0.66
Six3-202ENSMUST00000175898 Gm7735D3YX18 52 aa10.94□□□□□ -0.66
Six3-202ENSMUST00000175898 Krtap8-1O08633 61 aa10.88□□□□□ -0.67
Six3-202ENSMUST00000175898 Rnf213E9Q555 5152 aaKnown RBP10.78□□□□□ -0.68
Six3-202ENSMUST00000175898 Krtap19-9bQ99NG9 58 aa10.63□□□□□ -0.71
Six3-202ENSMUST00000175898 Krtap17-1A2A5X6 109 aa10.6□□□□□ -0.71
Six3-202ENSMUST00000175898 Lce1iQ9D6P5 149 aa10.41□□□□□ -0.74
Six3-202ENSMUST00000175898 Krtap9-3Q3V2C1 136 aa10.41□□□□□ -0.74
Six3-202ENSMUST00000175898 SspoQ8CG65 4998 aa10.4□□□□□ -0.74
Six3-202ENSMUST00000175898 Lce1a2Q9D1K4 149 aa10.37□□□□□ -0.75
Six3-202ENSMUST00000175898 Krtap19-2Q925I0 141 aa10.36□□□□□ -0.75
Six3-202ENSMUST00000175898 Krtap9-5A2A5X3 358 aa10.32□□□□□ -0.76
Six3-202ENSMUST00000175898 Lce1hQ9D6R3 140 aa10.29□□□□□ -0.76
Six3-202ENSMUST00000175898 Gm10061D3Z714 54 aa10.07□□□□□ -0.8
Six3-202ENSMUST00000175898 Lce1dQ9D731 133 aa10.03□□□□□ -0.8
Six3-202ENSMUST00000175898 Sprr2gO70558 76 aa9.82□□□□□ -0.84
Six3-202ENSMUST00000175898 4933428G20RikQ9D3X4 101 aa9.78□□□□□ -0.84
Six3-202ENSMUST00000175898 Gm6358A0A087WPH4 74 aa9.75□□□□□ -0.85
Six3-202ENSMUST00000175898 Muc5bE9Q5I3 4800 aa9.73□□□□□ -0.85
Six3-202ENSMUST00000175898 Lce1eQ9D139 143 aa9.65□□□□□ -0.86
Six3-202ENSMUST00000175898 Gm11938Q9D3H4 131 aa9.65□□□□□ -0.86
Six3-202ENSMUST00000175898 Mt2P02798 61 aa9.64□□□□□ -0.87
Six3-202ENSMUST00000175898 Sprr2dO70555 85 aa9.57□□□□□ -0.88
Six3-202ENSMUST00000175898 Gm11569B1AQB1 180 aa9.46□□□□□ -0.9
Six3-202ENSMUST00000175898 Krtap31-1Q9D644 177 aa9.29□□□□□ -0.92
Six3-202ENSMUST00000175898 A0A1Y7VJH8 109 aa9.24□□□□□ -0.93
Six3-202ENSMUST00000175898 Gm10272F7CZ33 110 aa9.16□□□□□ -0.94
Six3-202ENSMUST00000175898 Mdn1A2ANY6 5589 aaKnown RBP9.06□□□□□ -0.96
Six3-202ENSMUST00000175898 Krtap22-2J3QNX6 67 aa9.06□□□□□ -0.96
Six3-202ENSMUST00000175898 Lce1cQ9D1C5 147 aa9.05□□□□□ -0.96
Six3-202ENSMUST00000175898 Gm11562A0PK51 136 aa8.99□□□□□ -0.97
Six3-202ENSMUST00000175898 Krtap31-2Q8CAY5 177 aa8.86□□□□□ -0.99
Six3-202ENSMUST00000175898 Krtap28-10A0A1Y7VP58 119 aa8.84□□□□□ -0.99
Six3-202ENSMUST00000175898 Gm10100J3QK64 120 aa8.84□□□□□ -0.99
Six3-202ENSMUST00000175898 Sprr2iO70560 76 aa8.8□□□□□ -1
Six3-202ENSMUST00000175898 Krtap19-4Q925H7 84 aa8.8□□□□□ -1
Six3-202ENSMUST00000175898 Lce1fB9EJP6 147 aa8.73□□□□□ -1.01
Six3-202ENSMUST00000175898 Lce1a1Q9CQH5 143 aa8.73□□□□□ -1.01
Six3-202ENSMUST00000175898 Lce3bQ9CQM7 98 aa8.71□□□□□ -1.02
Six3-202ENSMUST00000175898 Gm10142J3KMP7 120 aa8.7□□□□□ -1.02
Six3-202ENSMUST00000175898 Krtap4-6Q3V4B7 195 aa8.64□□□□□ -1.03
Six3-202ENSMUST00000175898 Gm11555B1AQ89 175 aa8.57□□□□□ -1.04
Six3-202ENSMUST00000175898 A0A1Y7VLE6 161 aa8.56□□□□□ -1.04
Six3-202ENSMUST00000175898 Lce1gQ9D195 139 aa8.53□□□□□ -1.04
Six3-202ENSMUST00000175898 Krtap4-2B1AQ85 167 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms