RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Krtap7-1Q9D3I6 87 aa7.05□□□□□ -1.28
Sptbn4-202ENSMUST00000108362 Gm6358A0A087WPH4 74 aa6.96□□□□□ -1.29
Sptbn4-202ENSMUST00000108362 Fras1Q80T14 4010 aa6.95□□□□□ -1.3
Sptbn4-202ENSMUST00000108362 Sprr2a3Q4KL71 83 aa6.93□□□□□ -1.3
Sptbn4-202ENSMUST00000108362 Sprr2a1Q9CQK8 83 aa6.93□□□□□ -1.3
Sptbn4-202ENSMUST00000108362 Dnah7cA0A087WR13 4024 aa6.92□□□□□ -1.3
Sptbn4-202ENSMUST00000108362 Lrp1bQ9JI18 4599 aa6.91□□□□□ -1.3
Sptbn4-202ENSMUST00000108362 ApobE9Q414 4505 aa6.9□□□□□ -1.3
Sptbn4-202ENSMUST00000108362 Dync1h1Q9JHU4 4644 aaKnown RBP6.86□□□□□ -1.31
Sptbn4-202ENSMUST00000108362 Dnah2P0C6F1 4456 aa6.86□□□□□ -1.31
Sptbn4-202ENSMUST00000108362 Krtap1-5A2A590 122 aa6.83□□□□□ -1.32
Sptbn4-202ENSMUST00000108362 Dnah7aE9Q0T8 4024 aa6.82□□□□□ -1.32
Sptbn4-202ENSMUST00000108362 Ryr3A2AGL3 4863 aa6.8□□□□□ -1.32
Sptbn4-202ENSMUST00000108362 Ryr1E9PZQ0 5035 aa6.75□□□□□ -1.33
Sptbn4-202ENSMUST00000108362 Hectd4E9Q2E4 4418 aa6.74□□□□□ -1.33
Sptbn4-202ENSMUST00000108362 Krtap19-9aF8WH65 55 aa6.73□□□□□ -1.33
Sptbn4-202ENSMUST00000108362 Gm19402J3QJV4 266 aa6.72□□□□□ -1.33
Sptbn4-202ENSMUST00000108362 SacsQ9JLC8 4582 aa6.7□□□□□ -1.34
Sptbn4-202ENSMUST00000108362 Fat1A0A1L1SQU7 4645 aa6.7□□□□□ -1.34
Sptbn4-202ENSMUST00000108362 Krtap1-4Q3V2D6 188 aa6.68□□□□□ -1.34
Sptbn4-202ENSMUST00000108362 Pkd1O08852 4293 aa6.68□□□□□ -1.34
Sptbn4-202ENSMUST00000108362 Mycbp2Q7TPH6 4711 aa6.66□□□□□ -1.34
Sptbn4-202ENSMUST00000108362 Krtap19-9bQ99NG9 58 aa6.61□□□□□ -1.35
Sptbn4-202ENSMUST00000108362 Lrp1Q91ZX7 4545 aaKnown RBP6.61□□□□□ -1.35
Sptbn4-202ENSMUST00000108362 Krtap8-1O08633 61 aa6.58□□□□□ -1.36
Sptbn4-202ENSMUST00000108362 LorP18165 486 aa6.57□□□□□ -1.36
Sptbn4-202ENSMUST00000108362 Fat2Q5F226 4351 aa6.5□□□□□ -1.37
Sptbn4-202ENSMUST00000108362 Krtap12-1Q9Z287 130 aa6.49□□□□□ -1.37
Sptbn4-202ENSMUST00000108362 Gm18596A0A1W2P860 280 aa6.46□□□□□ -1.38
Sptbn4-202ENSMUST00000108362 Fat3Q8BNA6 4555 aa6.44□□□□□ -1.38
Sptbn4-202ENSMUST00000108362 Ryr2E9Q401 4966 aaKnown RBP6.42□□□□□ -1.38
Sptbn4-202ENSMUST00000108362 Vps13bQ80TY5 3993 aa6.4□□□□□ -1.39
Sptbn4-202ENSMUST00000108362 Kiaa1109A2AAE1 5005 aa6.35□□□□□ -1.39
Sptbn4-202ENSMUST00000108362 Herc2Q4U2R1 4836 aa6.32□□□□□ -1.4
Sptbn4-202ENSMUST00000108362 HydinQ80W93 5154 aa6.32□□□□□ -1.4
Sptbn4-202ENSMUST00000108362 Sprr2kO70562 68 aa6.3□□□□□ -1.4
Sptbn4-202ENSMUST00000108362 Dnah8Q91XQ0 4731 aa6.3□□□□□ -1.4
Sptbn4-202ENSMUST00000108362 Pkhd1E9PZ36 4059 aa6.29□□□□□ -1.4
Sptbn4-202ENSMUST00000108362 Krtap16-3Q8C1I6 86 aa6.27□□□□□ -1.41
Sptbn4-202ENSMUST00000108362 Abca13Q5SSE9 5034 aa6.23□□□□□ -1.41
Sptbn4-202ENSMUST00000108362 Kmt2cQ8BRH4 4903 aa6.23□□□□□ -1.41
Sptbn4-202ENSMUST00000108362 Lrp2A2ARV4 4660 aa6.22□□□□□ -1.41
Sptbn4-202ENSMUST00000108362 Krtap19-3Q925H6 87 aa6.22□□□□□ -1.41
Sptbn4-202ENSMUST00000108362 Pkhd1l1Q80ZA4 4249 aa6.21□□□□□ -1.42
Sptbn4-202ENSMUST00000108362 Lce1mQ9CR91 182 aa6.2□□□□□ -1.42
Sptbn4-202ENSMUST00000108362 Krtap19-1Q925H2 87 aa6.14□□□□□ -1.43
Sptbn4-202ENSMUST00000108362 Gm10100J3QK64 120 aa6.08□□□□□ -1.44
Sptbn4-202ENSMUST00000108362 Syne1Q6ZWR6 8799 aa6.05□□□□□ -1.44
Sptbn4-202ENSMUST00000108362 Dnhd1D3Z2X2 4750 aa5.99□□□□□ -1.45
Sptbn4-202ENSMUST00000108362 Krtap9-5A2A5X3 358 aa5.97□□□□□ -1.45
Sptbn4-202ENSMUST00000108362 Birc6O88738 4882 aa5.96□□□□□ -1.46
Sptbn4-202ENSMUST00000108362 Lce3cQ91V05 98 aa5.94□□□□□ -1.46
Sptbn4-202ENSMUST00000108362 Gm10272F7CZ33 110 aa5.93□□□□□ -1.46
Sptbn4-202ENSMUST00000108362 2310046K23RikA0A0A6YVW6 87 aa5.92□□□□□ -1.46
Sptbn4-202ENSMUST00000108362 Lce3bQ9CQM7 98 aa5.92□□□□□ -1.46
Sptbn4-202ENSMUST00000108362 Sprr2gO70558 76 aa5.91□□□□□ -1.46
Sptbn4-202ENSMUST00000108362 Gm10142J3KMP7 120 aa5.87□□□□□ -1.47
Sptbn4-202ENSMUST00000108362 Prm1P02319 51 aa5.87□□□□□ -1.47
Sptbn4-202ENSMUST00000108362 Krtap1-3A2A588 173 aa5.81□□□□□ -1.48
Sptbn4-202ENSMUST00000108362 PcloQ9QYX7 5068 aa5.81□□□□□ -1.48
Sptbn4-202ENSMUST00000108362 Lce3eF8VQJ0 98 aa5.77□□□□□ -1.49
Sptbn4-202ENSMUST00000108362 Lce3fQ6PAI4 98 aa5.77□□□□□ -1.49
Sptbn4-202ENSMUST00000108362 Lce1jD3YUU5 139 aa5.75□□□□□ -1.49
Sptbn4-202ENSMUST00000108362 Mt2P02798 61 aa5.73□□□□□ -1.49
Sptbn4-202ENSMUST00000108362 Gm7735D3YX18 52 aa5.72□□□□□ -1.49
Sptbn4-202ENSMUST00000108362 Krtap22-2J3QNX6 67 aa5.71□□□□□ -1.5
Sptbn4-202ENSMUST00000108362 Krtap19-2Q925I0 141 aa5.69□□□□□ -1.5
Sptbn4-202ENSMUST00000108362 Herc1E9PZP8 4859 aa5.68□□□□□ -1.5
Sptbn4-202ENSMUST00000108362 Gm9789Q8BIG3 52 aa5.66□□□□□ -1.5
Sptbn4-202ENSMUST00000108362 Mdn1A2ANY6 5589 aaKnown RBP5.63□□□□□ -1.51
Sptbn4-202ENSMUST00000108362 Lce3dE9Q8V1 98 aa5.61□□□□□ -1.51
Sptbn4-202ENSMUST00000108362 Lce3aQ497I5 98 aa5.59□□□□□ -1.51
Sptbn4-202ENSMUST00000108362 Ubr4A2AN08 5180 aa5.5□□□□□ -1.53
Sptbn4-202ENSMUST00000108362 Gm38119A0A0A6YX29 146 aa5.48□□□□□ -1.53
Sptbn4-202ENSMUST00000108362 Lce1gQ9D195 139 aa5.46□□□□□ -1.54
Sptbn4-202ENSMUST00000108362 Lce1iQ9D6P5 149 aa5.46□□□□□ -1.54
Sptbn4-202ENSMUST00000108362 Lce1hQ9D6R3 140 aa5.46□□□□□ -1.54
Sptbn4-202ENSMUST00000108362 4932415D10RikA0A1W2P6U8 4986 aa5.41□□□□□ -1.54
Sptbn4-202ENSMUST00000108362 Gm10061D3Z714 54 aa5.41□□□□□ -1.54
Sptbn4-202ENSMUST00000108362 Ush2AQ2QI47 5193 aa5.4□□□□□ -1.54
Sptbn4-202ENSMUST00000108362 Muc16A0A140LJ72 8478 aa5.4□□□□□ -1.54
Sptbn4-202ENSMUST00000108362 ZanO88799 5376 aa5.38□□□□□ -1.55
Sptbn4-202ENSMUST00000108362 Krtap9-3Q3V2C1 136 aa5.37□□□□□ -1.55
Sptbn4-202ENSMUST00000108362 Sprr2iO70560 76 aa5.34□□□□□ -1.55
Sptbn4-202ENSMUST00000108362 Gm10024A0A0A0MQA4 119 aa5.34□□□□□ -1.56
Sptbn4-202ENSMUST00000108362 Fat4Q2PZL6 4981 aa5.32□□□□□ -1.56
Sptbn4-202ENSMUST00000108362 Lce1fB9EJP6 147 aa5.32□□□□□ -1.56
Sptbn4-202ENSMUST00000108362 Lce1cQ9D1C5 147 aa5.32□□□□□ -1.56
Sptbn4-202ENSMUST00000108362 Lce1lQ9D1G7 135 aa5.32□□□□□ -1.56
Sptbn4-202ENSMUST00000108362 Lce1dQ9D731 133 aa5.32□□□□□ -1.56
Sptbn4-202ENSMUST00000108362 Lce1bQ9D149 137 aa5.28□□□□□ -1.56
Sptbn4-202ENSMUST00000108362 Lce1eQ9D139 143 aa5.25□□□□□ -1.57
Sptbn4-202ENSMUST00000108362 Lce1a2Q9D1K4 149 aa5.24□□□□□ -1.57
Sptbn4-202ENSMUST00000108362 Sprr2eO70556 76 aa5.24□□□□□ -1.57
Sptbn4-202ENSMUST00000108362 Hmcn2A2AJ76 5100 aa5.23□□□□□ -1.57
Sptbn4-202ENSMUST00000108362 Gm11569B1AQB1 180 aa5.22□□□□□ -1.57
Sptbn4-202ENSMUST00000108362 Krtap19-4Q925H7 84 aa5.2□□□□□ -1.58
Sptbn4-202ENSMUST00000108362 Krtap17-1A2A5X6 109 aa5.16□□□□□ -1.58
Sptbn4-202ENSMUST00000108362 Rnf213E9Q555 5152 aaKnown RBP5.12□□□□□ -1.59
Sptbn4-202ENSMUST00000108362 Sprr2fO70557 76 aa4.94□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 103.5 ms