RNA–Protein interactions for RNA: ENSMUST00000101164.10

Limch1-202, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Limch1, Length 5,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-202ENSMUST00000101164 Prm1P02319 51 aa4.14□□□□□ -1.75
Limch1-202ENSMUST00000101164 PrkdcP97313 4128 aa4.14□□□□□ -1.75
Limch1-202ENSMUST00000101164 Sprr2a3Q4KL71 83 aa4.12□□□□□ -1.75
Limch1-202ENSMUST00000101164 Sprr2a1Q9CQK8 83 aa4.12□□□□□ -1.75
Limch1-202ENSMUST00000101164 Dync1h1Q9JHU4 4644 aaKnown RBP4.1□□□□□ -1.75
Limch1-202ENSMUST00000101164 Krtap1-4Q3V2D6 188 aa4.09□□□□□ -1.75
Limch1-202ENSMUST00000101164 Gm6358A0A087WPH4 74 aa4.07□□□□□ -1.76
Limch1-202ENSMUST00000101164 SacsQ9JLC8 4582 aa4.06□□□□□ -1.76
Limch1-202ENSMUST00000101164 Dnah17Q69Z23 4481 aa4.05□□□□□ -1.76
Limch1-202ENSMUST00000101164 Dnah8Q91XQ0 4731 aa4.05□□□□□ -1.76
Limch1-202ENSMUST00000101164 Kiaa1109A2AAE1 5005 aa4.04□□□□□ -1.76
Limch1-202ENSMUST00000101164 Krtap12-1Q9Z287 130 aa4.04□□□□□ -1.76
Limch1-202ENSMUST00000101164 Dync2h1Q45VK7 4306 aa4.04□□□□□ -1.76
Limch1-202ENSMUST00000101164 Herc2Q4U2R1 4836 aa4.04□□□□□ -1.76
Limch1-202ENSMUST00000101164 Sprr2gO70558 76 aa4.01□□□□□ -1.77
Limch1-202ENSMUST00000101164 Ryr3A2AGL3 4863 aa4□□□□□ -1.77
Limch1-202ENSMUST00000101164 Gm7735D3YX18 52 aa4□□□□□ -1.77
Limch1-202ENSMUST00000101164 HydinQ80W93 5154 aa3.96□□□□□ -1.77
Limch1-202ENSMUST00000101164 Fat1A0A1L1SQU7 4645 aa3.96□□□□□ -1.78
Limch1-202ENSMUST00000101164 Csmd3Q80T79 3707 aa3.96□□□□□ -1.78
Limch1-202ENSMUST00000101164 Dnah7bL7N1Y0 4068 aa3.95□□□□□ -1.78
Limch1-202ENSMUST00000101164 ApobE9Q414 4505 aa3.93□□□□□ -1.78
Limch1-202ENSMUST00000101164 Dnah9B1AR51 4484 aa3.92□□□□□ -1.78
Limch1-202ENSMUST00000101164 Dnah6E9Q0B6 4144 aa3.92□□□□□ -1.78
Limch1-202ENSMUST00000101164 Dnhd1D3Z2X2 4750 aa3.92□□□□□ -1.78
Limch1-202ENSMUST00000101164 Krtap19-9bQ99NG9 58 aa3.9□□□□□ -1.78
Limch1-202ENSMUST00000101164 Dnah11E9Q7N9 4488 aa3.88□□□□□ -1.79
Limch1-202ENSMUST00000101164 Lrp2A2ARV4 4660 aa3.88□□□□□ -1.79
Limch1-202ENSMUST00000101164 Krtap19-3Q925H6 87 aa3.88□□□□□ -1.79
Limch1-202ENSMUST00000101164 Lrp1bQ9JI18 4599 aa3.86□□□□□ -1.79
Limch1-202ENSMUST00000101164 Pkd1O08852 4293 aa3.86□□□□□ -1.79
Limch1-202ENSMUST00000101164 Krtap9-5A2A5X3 358 aa3.85□□□□□ -1.79
Limch1-202ENSMUST00000101164 Krtap16-3Q8C1I6 86 aa3.85□□□□□ -1.79
Limch1-202ENSMUST00000101164 Gm9789Q8BIG3 52 aa3.84□□□□□ -1.79
Limch1-202ENSMUST00000101164 Ryr2E9Q401 4966 aaKnown RBP3.83□□□□□ -1.8
Limch1-202ENSMUST00000101164 Kmt2aP55200 3966 aa3.83□□□□□ -1.8
Limch1-202ENSMUST00000101164 Fat3Q8BNA6 4555 aa3.82□□□□□ -1.8
Limch1-202ENSMUST00000101164 Dnah2P0C6F1 4456 aa3.82□□□□□ -1.8
Limch1-202ENSMUST00000101164 Krtap19-1Q925H2 87 aa3.8□□□□□ -1.8
Limch1-202ENSMUST00000101164 Dnah3Q8BW94 4083 aa3.8□□□□□ -1.8
Limch1-202ENSMUST00000101164 PcloQ9QYX7 5068 aa3.77□□□□□ -1.81
Limch1-202ENSMUST00000101164 Fras1Q80T14 4010 aa3.75□□□□□ -1.81
Limch1-202ENSMUST00000101164 2310046K23RikA0A0A6YVW6 87 aa3.74□□□□□ -1.81
Limch1-202ENSMUST00000101164 Dnah1E9Q8T7 4250 aa3.73□□□□□ -1.81
Limch1-202ENSMUST00000101164 Krtap1-3A2A588 173 aa3.72□□□□□ -1.81
Limch1-202ENSMUST00000101164 Lrp1Q91ZX7 4545 aaKnown RBP3.72□□□□□ -1.81
Limch1-202ENSMUST00000101164 Mdn1A2ANY6 5589 aaKnown RBP3.68□□□□□ -1.82
Limch1-202ENSMUST00000101164 Gm10061D3Z714 54 aa3.68□□□□□ -1.82
Limch1-202ENSMUST00000101164 Gm10272F7CZ33 110 aa3.65□□□□□ -1.82
Limch1-202ENSMUST00000101164 Gm10100J3QK64 120 aa3.65□□□□□ -1.82
Limch1-202ENSMUST00000101164 Birc6O88738 4882 aa3.65□□□□□ -1.83
Limch1-202ENSMUST00000101164 Krtap22-2J3QNX6 67 aa3.64□□□□□ -1.83
Limch1-202ENSMUST00000101164 Gm11569B1AQB1 180 aa3.63□□□□□ -1.83
Limch1-202ENSMUST00000101164 Krtap19-2Q925I0 141 aa3.63□□□□□ -1.83
Limch1-202ENSMUST00000101164 4932415D10RikA0A1W2P6U8 4986 aa3.63□□□□□ -1.83
Limch1-202ENSMUST00000101164 Lce3bQ9CQM7 98 aa3.63□□□□□ -1.83
Limch1-202ENSMUST00000101164 Herc1E9PZP8 4859 aa3.63□□□□□ -1.83
Limch1-202ENSMUST00000101164 Mt2P02798 61 aa3.63□□□□□ -1.83
Limch1-202ENSMUST00000101164 Gm38119A0A0A6YX29 146 aa3.62□□□□□ -1.83
Limch1-202ENSMUST00000101164 Hectd4E9Q2E4 4418 aa3.61□□□□□ -1.83
Limch1-202ENSMUST00000101164 Dnah7cA0A087WR13 4024 aa3.6□□□□□ -1.83
Limch1-202ENSMUST00000101164 Krtap4-2B1AQ85 167 aa3.59□□□□□ -1.83
Limch1-202ENSMUST00000101164 Dnah7aE9Q0T8 4024 aa3.58□□□□□ -1.84
Limch1-202ENSMUST00000101164 Gm10142J3KMP7 120 aa3.58□□□□□ -1.84
Limch1-202ENSMUST00000101164 Lce3cQ91V05 98 aa3.52□□□□□ -1.85
Limch1-202ENSMUST00000101164 Kmt2cQ8BRH4 4903 aa3.5□□□□□ -1.85
Limch1-202ENSMUST00000101164 Lce1gQ9D195 139 aa3.49□□□□□ -1.85
Limch1-202ENSMUST00000101164 Sprr2iO70560 76 aa3.49□□□□□ -1.85
Limch1-202ENSMUST00000101164 Lce1jD3YUU5 139 aa3.43□□□□□ -1.86
Limch1-202ENSMUST00000101164 Krtap4-6Q3V4B7 195 aa3.43□□□□□ -1.86
Limch1-202ENSMUST00000101164 Rnf213E9Q555 5152 aaKnown RBP3.42□□□□□ -1.86
Limch1-202ENSMUST00000101164 Fat2Q5F226 4351 aa3.42□□□□□ -1.86
Limch1-202ENSMUST00000101164 Krtap31-1Q9D644 177 aa3.41□□□□□ -1.86
Limch1-202ENSMUST00000101164 Pkhd1E9PZ36 4059 aa3.41□□□□□ -1.86
Limch1-202ENSMUST00000101164 Mt4P47945 62 aa3.39□□□□□ -1.87
Limch1-202ENSMUST00000101164 Abca13Q5SSE9 5034 aa3.38□□□□□ -1.87
Limch1-202ENSMUST00000101164 Ubr4A2AN08 5180 aa3.38□□□□□ -1.87
Limch1-202ENSMUST00000101164 Krtap9-3Q3V2C1 136 aa3.38□□□□□ -1.87
Limch1-202ENSMUST00000101164 Fat4Q2PZL6 4981 aa3.37□□□□□ -1.87
Limch1-202ENSMUST00000101164 Lce3dE9Q8V1 98 aa3.36□□□□□ -1.87
Limch1-202ENSMUST00000101164 Lce3eF8VQJ0 98 aa3.36□□□□□ -1.87
Limch1-202ENSMUST00000101164 Lce3fQ6PAI4 98 aa3.36□□□□□ -1.87
Limch1-202ENSMUST00000101164 Vps13bQ80TY5 3993 aa3.35□□□□□ -1.87
Limch1-202ENSMUST00000101164 Lce1bQ9D149 137 aa3.35□□□□□ -1.87
Limch1-202ENSMUST00000101164 Lce1fB9EJP6 147 aa3.34□□□□□ -1.88
Limch1-202ENSMUST00000101164 Lce1cQ9D1C5 147 aa3.34□□□□□ -1.88
Limch1-202ENSMUST00000101164 Lce1lQ9D1G7 135 aa3.34□□□□□ -1.88
Limch1-202ENSMUST00000101164 Lce1dQ9D731 133 aa3.34□□□□□ -1.88
Limch1-202ENSMUST00000101164 Gm11596B1AQB0 205 aa3.33□□□□□ -1.88
Limch1-202ENSMUST00000101164 Lce3aQ497I5 98 aa3.33□□□□□ -1.88
Limch1-202ENSMUST00000101164 ZanO88799 5376 aa3.32□□□□□ -1.88
Limch1-202ENSMUST00000101164 Sprr2fO70557 76 aa3.31□□□□□ -1.88
Limch1-202ENSMUST00000101164 Krtap4-1Q3UUY3 169 aa3.3□□□□□ -1.88
Limch1-202ENSMUST00000101164 Pkhd1l1Q80ZA4 4249 aa3.25□□□□□ -1.89
Limch1-202ENSMUST00000101164 Lce1iQ9D6P5 149 aa3.25□□□□□ -1.89
Limch1-202ENSMUST00000101164 Lce1hQ9D6R3 140 aa3.25□□□□□ -1.89
Limch1-202ENSMUST00000101164 Ush2AQ2QI47 5193 aa3.25□□□□□ -1.89
Limch1-202ENSMUST00000101164 Gm11564A2A4L9 201 aa3.25□□□□□ -1.89
Limch1-202ENSMUST00000101164 Gm11563B1AQ90 168 aa3.25□□□□□ -1.89
Limch1-202ENSMUST00000101164 Gm11595B1AQA7 289 aa3.25□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 163.7 ms