RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 Krtap19-5O08632 62 aa6.17□□□□□ -1.42
Lig1-201ENSMUST00000098814 Fat3Q8BNA6 4555 aa6.17□□□□□ -1.42
Lig1-201ENSMUST00000098814 Dnhd1D3Z2X2 4750 aa6.17□□□□□ -1.42
Lig1-201ENSMUST00000098814 Krtap3-1A2A591 98 aa6.16□□□□□ -1.42
Lig1-201ENSMUST00000098814 Gm5965D3Z724 196 aa6.15□□□□□ -1.43
Lig1-201ENSMUST00000098814 Gm17416Q30KP4 66 aa6.14□□□□□ -1.43
Lig1-201ENSMUST00000098814 Kmt2cQ8BRH4 4903 aa6.13□□□□□ -1.43
Lig1-201ENSMUST00000098814 Mycbp2Q7TPH6 4711 aa6.12□□□□□ -1.43
Lig1-201ENSMUST00000098814 2310057N15RikQ9D6T8 200 aa6.08□□□□□ -1.44
Lig1-201ENSMUST00000098814 2210017I01RikA0A0A6YVV1 95 aa6.02□□□□□ -1.44
Lig1-201ENSMUST00000098814 Abca13Q5SSE9 5034 aa5.96□□□□□ -1.46
Lig1-201ENSMUST00000098814 Gm19426M0QWC7 77 aa5.94□□□□□ -1.46
Lig1-201ENSMUST00000098814 B930094E09RikQ8C4T2 136 aa5.94□□□□□ -1.46
Lig1-201ENSMUST00000098814 Birc6O88738 4882 aa5.92□□□□□ -1.46
Lig1-201ENSMUST00000098814 BC029722A0A0N4SW31 51 aa5.85□□□□□ -1.47
Lig1-201ENSMUST00000098814 Krtap13-1Q8K198 168 aa5.83□□□□□ -1.48
Lig1-201ENSMUST00000098814 Gm17402F6Z0L5 76 aa5.78□□□□□ -1.48
Lig1-201ENSMUST00000098814 Krtap7-1Q9D3I6 87 aa5.78□□□□□ -1.48
Lig1-201ENSMUST00000098814 Gm19402J3QJV4 266 aa5.7□□□□□ -1.5
Lig1-201ENSMUST00000098814 Krtap1-5A2A590 122 aa5.69□□□□□ -1.5
Lig1-201ENSMUST00000098814 Herc2Q4U2R1 4836 aa5.67□□□□□ -1.5
Lig1-201ENSMUST00000098814 Lce1mQ9CR91 182 aa5.66□□□□□ -1.5
Lig1-201ENSMUST00000098814 Gm40193A0A1B0GT39 78 aa5.64□□□□□ -1.51
Lig1-201ENSMUST00000098814 Kiaa1109A2AAE1 5005 aa5.63□□□□□ -1.51
Lig1-201ENSMUST00000098814 Gm19668J3QMD1 248 aa5.62□□□□□ -1.51
Lig1-201ENSMUST00000098814 Sprr2a3Q4KL71 83 aa5.61□□□□□ -1.51
Lig1-201ENSMUST00000098814 Sprr2a1Q9CQK8 83 aa5.61□□□□□ -1.51
Lig1-201ENSMUST00000098814 Fam229aB2KGE5 128 aa5.6□□□□□ -1.51
Lig1-201ENSMUST00000098814 Lrp2A2ARV4 4660 aa5.59□□□□□ -1.51
Lig1-201ENSMUST00000098814 HydinQ80W93 5154 aa5.58□□□□□ -1.52
Lig1-201ENSMUST00000098814 Camk2n1Q6QWF9 78 aa5.55□□□□□ -1.52
Lig1-201ENSMUST00000098814 Spink7Q6IE32 76 aa5.5□□□□□ -1.53
Lig1-201ENSMUST00000098814 Krtap16-3Q8C1I6 86 aa5.47□□□□□ -1.53
Lig1-201ENSMUST00000098814 Gm18596A0A1W2P860 280 aa5.45□□□□□ -1.54
Lig1-201ENSMUST00000098814 Gm10318A0A1W2P728 225 aa5.42□□□□□ -1.54
Lig1-201ENSMUST00000098814 Crct1Q6PAI5 102 aa5.39□□□□□ -1.55
Lig1-201ENSMUST00000098814 Krtap19-1Q925H2 87 aa5.38□□□□□ -1.55
Lig1-201ENSMUST00000098814 PcloQ9QYX7 5068 aa5.36□□□□□ -1.55
Lig1-201ENSMUST00000098814 Krtap19-3Q925H6 87 aa5.32□□□□□ -1.56
Lig1-201ENSMUST00000098814 Krtap1-4Q3V2D6 188 aa5.3□□□□□ -1.56
Lig1-201ENSMUST00000098814 Herc1E9PZP8 4859 aa5.29□□□□□ -1.56
Lig1-201ENSMUST00000098814 Prm1P02319 51 aa5.28□□□□□ -1.56
Lig1-201ENSMUST00000098814 Gm9789Q8BIG3 52 aa5.23□□□□□ -1.57
Lig1-201ENSMUST00000098814 Gm7735D3YX18 52 aa5.22□□□□□ -1.57
Lig1-201ENSMUST00000098814 ZanO88799 5376 aa5.09□□□□□ -1.59
Lig1-201ENSMUST00000098814 Krtap1-3A2A588 173 aa5.09□□□□□ -1.6
Lig1-201ENSMUST00000098814 Tnp1P10856 55 aa5.09□□□□□ -1.6
Lig1-201ENSMUST00000098814 Ush2AQ2QI47 5193 aa5.08□□□□□ -1.6
Lig1-201ENSMUST00000098814 Lce1jD3YUU5 139 aa5.08□□□□□ -1.6
Lig1-201ENSMUST00000098814 Hmcn2A2AJ76 5100 aa5.08□□□□□ -1.6
Lig1-201ENSMUST00000098814 4932415D10RikA0A1W2P6U8 4986 aa5.07□□□□□ -1.6
Lig1-201ENSMUST00000098814 Rnf213E9Q555 5152 aaKnown RBP5.07□□□□□ -1.6
Lig1-201ENSMUST00000098814 Krtap19-9aF8WH65 55 aa5.02□□□□□ -1.61
Lig1-201ENSMUST00000098814 Krtap12-1Q9Z287 130 aa5.02□□□□□ -1.61
Lig1-201ENSMUST00000098814 Ubr4A2AN08 5180 aa5.01□□□□□ -1.61
Lig1-201ENSMUST00000098814 Fat4Q2PZL6 4981 aa4.96□□□□□ -1.62
Lig1-201ENSMUST00000098814 Krtap8-1O08633 61 aa4.9□□□□□ -1.63
Lig1-201ENSMUST00000098814 SspoQ8CG65 4998 aa4.88□□□□□ -1.63
Lig1-201ENSMUST00000098814 2310046K23RikA0A0A6YVW6 87 aa4.87□□□□□ -1.63
Lig1-201ENSMUST00000098814 LorP18165 486 aa4.86□□□□□ -1.63
Lig1-201ENSMUST00000098814 Krtap31-1Q9D644 177 aa4.84□□□□□ -1.63
Lig1-201ENSMUST00000098814 Krtap17-1A2A5X6 109 aa4.81□□□□□ -1.64
Lig1-201ENSMUST00000098814 Krtap19-9bQ99NG9 58 aa4.8□□□□□ -1.64
Lig1-201ENSMUST00000098814 Lce1iQ9D6P5 149 aa4.78□□□□□ -1.64
Lig1-201ENSMUST00000098814 Lce1a2Q9D1K4 149 aa4.75□□□□□ -1.65
Lig1-201ENSMUST00000098814 Krtap9-3Q3V2C1 136 aa4.69□□□□□ -1.66
Lig1-201ENSMUST00000098814 Krtap19-2Q925I0 141 aa4.68□□□□□ -1.66
Lig1-201ENSMUST00000098814 Krtap9-5A2A5X3 358 aa4.64□□□□□ -1.67
Lig1-201ENSMUST00000098814 Lce1hQ9D6R3 140 aa4.64□□□□□ -1.67
Lig1-201ENSMUST00000098814 Gm10061D3Z714 54 aa4.59□□□□□ -1.68
Lig1-201ENSMUST00000098814 Krtap31-2Q8CAY5 177 aa4.52□□□□□ -1.69
Lig1-201ENSMUST00000098814 Gm11562A0PK51 136 aa4.49□□□□□ -1.69
Lig1-201ENSMUST00000098814 Gm11569B1AQB1 180 aa4.46□□□□□ -1.7
Lig1-201ENSMUST00000098814 Muc5bE9Q5I3 4800 aa4.46□□□□□ -1.7
Lig1-201ENSMUST00000098814 Lce1dQ9D731 133 aa4.44□□□□□ -1.7
Lig1-201ENSMUST00000098814 Mt2P02798 61 aa4.41□□□□□ -1.7
Lig1-201ENSMUST00000098814 Gm6358A0A087WPH4 74 aa4.37□□□□□ -1.71
Lig1-201ENSMUST00000098814 Sprr2gO70558 76 aa4.35□□□□□ -1.71
Lig1-201ENSMUST00000098814 Krtap4-2B1AQ85 167 aa4.34□□□□□ -1.71
Lig1-201ENSMUST00000098814 Lce1gQ9D195 139 aa4.3□□□□□ -1.72
Lig1-201ENSMUST00000098814 Lce1eQ9D139 143 aa4.28□□□□□ -1.72
Lig1-201ENSMUST00000098814 4933428G20RikQ9D3X4 101 aa4.28□□□□□ -1.72
Lig1-201ENSMUST00000098814 Gm11938Q9D3H4 131 aa4.26□□□□□ -1.73
Lig1-201ENSMUST00000098814 Sprr2dO70555 85 aa4.25□□□□□ -1.73
Lig1-201ENSMUST00000098814 Gm11555B1AQ89 175 aa4.2□□□□□ -1.74
Lig1-201ENSMUST00000098814 Gm10272F7CZ33 110 aa4.15□□□□□ -1.74
Lig1-201ENSMUST00000098814 Gm11596B1AQB0 205 aa4.13□□□□□ -1.75
Lig1-201ENSMUST00000098814 Krtap22-2J3QNX6 67 aa4.12□□□□□ -1.75
Lig1-201ENSMUST00000098814 Krtap4-6Q3V4B7 195 aa4.07□□□□□ -1.76
Lig1-201ENSMUST00000098814 Syne2Q6ZWQ0 6874 aaKnown RBP4.06□□□□□ -1.76
Lig1-201ENSMUST00000098814 Lce1cQ9D1C5 147 aa4.05□□□□□ -1.76
Lig1-201ENSMUST00000098814 Krtap4-1Q3UUY3 169 aa4.01□□□□□ -1.77
Lig1-201ENSMUST00000098814 Krtap19-4Q925H7 84 aa3.94□□□□□ -1.78
Lig1-201ENSMUST00000098814 Gm11564A2A4L9 201 aa3.92□□□□□ -1.78
Lig1-201ENSMUST00000098814 Gm11563B1AQ90 168 aa3.92□□□□□ -1.78
Lig1-201ENSMUST00000098814 Gm11595B1AQA7 289 aa3.92□□□□□ -1.78
Lig1-201ENSMUST00000098814 Krtap4-8B1AQA8 209 aa3.92□□□□□ -1.78
Lig1-201ENSMUST00000098814 Gm10100J3QK64 120 aa3.92□□□□□ -1.78
Lig1-201ENSMUST00000098814 Lce1fB9EJP6 147 aa3.9□□□□□ -1.79
Lig1-201ENSMUST00000098814 Sprr2iO70560 76 aa3.9□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 105.8 ms