RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Gm20537G3UYK7 97 aa5.17□□□□□ -1.58
Ldb3-205ENSMUST00000090040 Ryr3A2AGL3 4863 aa5.17□□□□□ -1.58
Ldb3-205ENSMUST00000090040 Fat1A0A1L1SQU7 4645 aa5.16□□□□□ -1.58
Ldb3-205ENSMUST00000090040 Hectd4E9Q2E4 4418 aa5.16□□□□□ -1.58
Ldb3-205ENSMUST00000090040 SacsQ9JLC8 4582 aa5.11□□□□□ -1.59
Ldb3-205ENSMUST00000090040 Ryr1E9PZQ0 5035 aa5.1□□□□□ -1.59
Ldb3-205ENSMUST00000090040 Ryr2E9Q401 4966 aaKnown RBP5.09□□□□□ -1.59
Ldb3-205ENSMUST00000090040 Krtap13-1Q8K198 168 aa5.07□□□□□ -1.6
Ldb3-205ENSMUST00000090040 Krtap3-1A2A591 98 aa5.04□□□□□ -1.6
Ldb3-205ENSMUST00000090040 Dnah8Q91XQ0 4731 aa5.03□□□□□ -1.6
Ldb3-205ENSMUST00000090040 Fat3Q8BNA6 4555 aa5□□□□□ -1.61
Ldb3-205ENSMUST00000090040 Fat2Q5F226 4351 aa4.98□□□□□ -1.61
Ldb3-205ENSMUST00000090040 Crct1Q6PAI5 102 aa4.95□□□□□ -1.62
Ldb3-205ENSMUST00000090040 4933428G20RikQ9D3X4 101 aa4.95□□□□□ -1.62
Ldb3-205ENSMUST00000090040 Gm10318A0A1W2P728 225 aa4.91□□□□□ -1.62
Ldb3-205ENSMUST00000090040 Lrp1Q91ZX7 4545 aaKnown RBP4.9□□□□□ -1.62
Ldb3-205ENSMUST00000090040 Mycbp2Q7TPH6 4711 aa4.89□□□□□ -1.63
Ldb3-205ENSMUST00000090040 Herc2Q4U2R1 4836 aa4.88□□□□□ -1.63
Ldb3-205ENSMUST00000090040 Krtap1-5A2A590 122 aa4.88□□□□□ -1.63
Ldb3-205ENSMUST00000090040 Lce1mQ9CR91 182 aa4.88□□□□□ -1.63
Ldb3-205ENSMUST00000090040 Kiaa1109A2AAE1 5005 aa4.86□□□□□ -1.63
Ldb3-205ENSMUST00000090040 Gm18596A0A1W2P860 280 aa4.85□□□□□ -1.63
Ldb3-205ENSMUST00000090040 Pkhd1l1Q80ZA4 4249 aa4.84□□□□□ -1.63
Ldb3-205ENSMUST00000090040 Pkhd1E9PZ36 4059 aa4.82□□□□□ -1.64
Ldb3-205ENSMUST00000090040 Prm2P07978 107 aa4.78□□□□□ -1.64
Ldb3-205ENSMUST00000090040 Gm19668J3QMD1 248 aa4.78□□□□□ -1.64
Ldb3-205ENSMUST00000090040 Dnhd1D3Z2X2 4750 aa4.78□□□□□ -1.65
Ldb3-205ENSMUST00000090040 Birc6O88738 4882 aa4.75□□□□□ -1.65
Ldb3-205ENSMUST00000090040 Kmt2cQ8BRH4 4903 aa4.72□□□□□ -1.65
Ldb3-205ENSMUST00000090040 Vps13bQ80TY5 3993 aa4.71□□□□□ -1.66
Ldb3-205ENSMUST00000090040 Lrp2A2ARV4 4660 aa4.68□□□□□ -1.66
Ldb3-205ENSMUST00000090040 Gm19402J3QJV4 266 aa4.67□□□□□ -1.66
Ldb3-205ENSMUST00000090040 LorP18165 486 aa4.65□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Krtap16-3Q8C1I6 86 aa4.65□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Krtap1-4Q3V2D6 188 aa4.65□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Prm1P02319 51 aa4.64□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Abca13Q5SSE9 5034 aa4.63□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Sprr2a3Q4KL71 83 aa4.63□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Sprr2a1Q9CQK8 83 aa4.63□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Krtap19-3Q925H6 87 aa4.61□□□□□ -1.67
Ldb3-205ENSMUST00000090040 HydinQ80W93 5154 aa4.61□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Krtap19-1Q925H2 87 aa4.6□□□□□ -1.67
Ldb3-205ENSMUST00000090040 Krtap19-9aF8WH65 55 aa4.56□□□□□ -1.68
Ldb3-205ENSMUST00000090040 Gm7735D3YX18 52 aa4.52□□□□□ -1.69
Ldb3-205ENSMUST00000090040 Gm9789Q8BIG3 52 aa4.51□□□□□ -1.69
Ldb3-205ENSMUST00000090040 Krtap12-1Q9Z287 130 aa4.51□□□□□ -1.69
Ldb3-205ENSMUST00000090040 Krtap1-3A2A588 173 aa4.45□□□□□ -1.7
Ldb3-205ENSMUST00000090040 Herc1E9PZP8 4859 aa4.39□□□□□ -1.71
Ldb3-205ENSMUST00000090040 A0A1Y7VLE6 161 aa4.28□□□□□ -1.72
Ldb3-205ENSMUST00000090040 Krtap9-5A2A5X3 358 aa4.26□□□□□ -1.73
Ldb3-205ENSMUST00000090040 Krtap19-9bQ99NG9 58 aa4.26□□□□□ -1.73
Ldb3-205ENSMUST00000090040 PcloQ9QYX7 5068 aa4.25□□□□□ -1.73
Ldb3-205ENSMUST00000090040 Krtap7-1Q9D3I6 87 aa4.24□□□□□ -1.73
Ldb3-205ENSMUST00000090040 Lce1jD3YUU5 139 aa4.19□□□□□ -1.74
Ldb3-205ENSMUST00000090040 Krtap19-2Q925I0 141 aa4.18□□□□□ -1.74
Ldb3-205ENSMUST00000090040 Krtap8-1O08633 61 aa4.18□□□□□ -1.74
Ldb3-205ENSMUST00000090040 4932415D10RikA0A1W2P6U8 4986 aa4.18□□□□□ -1.74
Ldb3-205ENSMUST00000090040 Ush2AQ2QI47 5193 aa4.17□□□□□ -1.74
Ldb3-205ENSMUST00000090040 Gm10061D3Z714 54 aa4.14□□□□□ -1.75
Ldb3-205ENSMUST00000090040 ZanO88799 5376 aa4.14□□□□□ -1.75
Ldb3-205ENSMUST00000090040 Fat4Q2PZL6 4981 aa4.09□□□□□ -1.75
Ldb3-205ENSMUST00000090040 Ubr4A2AN08 5180 aa4.08□□□□□ -1.76
Ldb3-205ENSMUST00000090040 Gm6358A0A087WPH4 74 aa4.06□□□□□ -1.76
Ldb3-205ENSMUST00000090040 Hmcn2A2AJ76 5100 aa4.04□□□□□ -1.76
Ldb3-205ENSMUST00000090040 Mt2P02798 61 aa4.01□□□□□ -1.77
Ldb3-205ENSMUST00000090040 Gm11569B1AQB1 180 aa3.97□□□□□ -1.77
Ldb3-205ENSMUST00000090040 Rnf213E9Q555 5152 aaKnown RBP3.93□□□□□ -1.78
Ldb3-205ENSMUST00000090040 A030003K21RikA0A1Y7VIM3 128 aa3.92□□□□□ -1.78
Ldb3-205ENSMUST00000090040 Lce1iQ9D6P5 149 aa3.91□□□□□ -1.78
Ldb3-205ENSMUST00000090040 Krtap22-2J3QNX6 67 aa3.9□□□□□ -1.79
Ldb3-205ENSMUST00000090040 Sprr2kO70562 68 aa3.89□□□□□ -1.79
Ldb3-205ENSMUST00000090040 A0A1Y7VJH8 109 aa3.86□□□□□ -1.79
Ldb3-205ENSMUST00000090040 Lce1a2Q9D1K4 149 aa3.84□□□□□ -1.79
Ldb3-205ENSMUST00000090040 2310046K23RikA0A0A6YVW6 87 aa3.82□□□□□ -1.8
Ldb3-205ENSMUST00000090040 Krtap17-1A2A5X6 109 aa3.8□□□□□ -1.8
Ldb3-205ENSMUST00000090040 SspoQ8CG65 4998 aa3.8□□□□□ -1.8
Ldb3-205ENSMUST00000090040 Sprr2gO70558 76 aa3.79□□□□□ -1.8
Ldb3-205ENSMUST00000090040 Krtap28-10A0A1Y7VP58 119 aa3.76□□□□□ -1.81
Ldb3-205ENSMUST00000090040 Muc5bE9Q5I3 4800 aa3.72□□□□□ -1.81
Ldb3-205ENSMUST00000090040 Gm10272F7CZ33 110 aa3.7□□□□□ -1.82
Ldb3-205ENSMUST00000090040 Lce3bQ9CQM7 98 aa3.69□□□□□ -1.82
Ldb3-205ENSMUST00000090040 Mdn1A2ANY6 5589 aaKnown RBP3.69□□□□□ -1.82
Ldb3-205ENSMUST00000090040 Krtap4-2B1AQ85 167 aa3.68□□□□□ -1.82
Ldb3-205ENSMUST00000090040 Lce1gQ9D195 139 aa3.67□□□□□ -1.82
Ldb3-205ENSMUST00000090040 Krtap28-13A0A087WQP5 138 aa3.65□□□□□ -1.82
Ldb3-205ENSMUST00000090040 Gm6217A0A1Y7VJK9 128 aa3.65□□□□□ -1.82
Ldb3-205ENSMUST00000090040 Krtap4-6Q3V4B7 195 aa3.64□□□□□ -1.83
Ldb3-205ENSMUST00000090040 Gm10100J3QK64 120 aa3.62□□□□□ -1.83
Ldb3-205ENSMUST00000090040 Krtap9-3Q3V2C1 136 aa3.62□□□□□ -1.83
Ldb3-205ENSMUST00000090040 Lce3cQ91V05 98 aa3.62□□□□□ -1.83
Ldb3-205ENSMUST00000090040 Gm38119A0A0A6YX29 146 aa3.58□□□□□ -1.84
Ldb3-205ENSMUST00000090040 A0A1Y7VJ07 166 aa3.58□□□□□ -1.84
Ldb3-205ENSMUST00000090040 Gm10142J3KMP7 120 aa3.58□□□□□ -1.84
Ldb3-205ENSMUST00000090040 A030005K14RikA0A1Y7VNY1 122 aa3.58□□□□□ -1.84
Ldb3-205ENSMUST00000090040 Lce3dE9Q8V1 98 aa3.56□□□□□ -1.84
Ldb3-205ENSMUST00000090040 Krtap4-1Q3UUY3 169 aa3.55□□□□□ -1.84
Ldb3-205ENSMUST00000090040 Gm11596B1AQB0 205 aa3.54□□□□□ -1.84
Ldb3-205ENSMUST00000090040 Lce3eF8VQJ0 98 aa3.52□□□□□ -1.85
Ldb3-205ENSMUST00000090040 Lce3fQ6PAI4 98 aa3.52□□□□□ -1.85
Ldb3-205ENSMUST00000090040 Lce1hQ9D6R3 140 aa3.52□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 138.6 ms