RNA–Protein interactions for RNA: ENSMUST00000088307.3

BC003965-201, mousemouse

APPRIS P1 TSL 2 BASIC

Gene BC003965, Length 3,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BC003965-201ENSMUST00000088307 Rps29P62274 56 aa7.14□□□□□ -1.27
BC003965-201ENSMUST00000088307 Krtap15-1Q9QZU5 150 aa7.1□□□□□ -1.27
BC003965-201ENSMUST00000088307 Gm5767A0A0J9YTU8 78 aa7.09□□□□□ -1.28
BC003965-201ENSMUST00000088307 Kiaa1109A2AAE1 5005 aa7.06□□□□□ -1.28
BC003965-201ENSMUST00000088307 HydinQ80W93 5154 aa7.04□□□□□ -1.28
BC003965-201ENSMUST00000088307 Herc2Q4U2R1 4836 aa7.04□□□□□ -1.28
BC003965-201ENSMUST00000088307 Dnah8Q91XQ0 4731 aa7.03□□□□□ -1.28
BC003965-201ENSMUST00000088307 Gm9112A2AI92 75 aa7.03□□□□□ -1.28
BC003965-201ENSMUST00000088307 Gm19668J3QMD1 248 aa6.93□□□□□ -1.3
BC003965-201ENSMUST00000088307 Lrp2A2ARV4 4660 aa6.91□□□□□ -1.3
BC003965-201ENSMUST00000088307 Krtap7-1Q9D3I6 87 aa6.9□□□□□ -1.31
BC003965-201ENSMUST00000088307 Gm19426M0QWC7 77 aa6.86□□□□□ -1.31
BC003965-201ENSMUST00000088307 PcloQ9QYX7 5068 aa6.86□□□□□ -1.31
BC003965-201ENSMUST00000088307 2310057N15RikQ9D6T8 200 aa6.82□□□□□ -1.32
BC003965-201ENSMUST00000088307 Dnhd1D3Z2X2 4750 aa6.78□□□□□ -1.32
BC003965-201ENSMUST00000088307 Birc6O88738 4882 aa6.77□□□□□ -1.33
BC003965-201ENSMUST00000088307 B930094E09RikQ8C4T2 136 aa6.76□□□□□ -1.33
BC003965-201ENSMUST00000088307 Fam229aB2KGE5 128 aa6.72□□□□□ -1.33
BC003965-201ENSMUST00000088307 Krtap3-1A2A591 98 aa6.64□□□□□ -1.35
BC003965-201ENSMUST00000088307 Gm10318A0A1W2P728 225 aa6.61□□□□□ -1.35
BC003965-201ENSMUST00000088307 Gm17416Q30KP4 66 aa6.59□□□□□ -1.35
BC003965-201ENSMUST00000088307 Herc1E9PZP8 4859 aa6.56□□□□□ -1.36
BC003965-201ENSMUST00000088307 Crct1Q6PAI5 102 aa6.55□□□□□ -1.36
BC003965-201ENSMUST00000088307 Gm40193A0A1B0GT39 78 aa6.5□□□□□ -1.37
BC003965-201ENSMUST00000088307 2210017I01RikA0A0A6YVV1 95 aa6.49□□□□□ -1.37
BC003965-201ENSMUST00000088307 Gm19402J3QJV4 266 aa6.48□□□□□ -1.37
BC003965-201ENSMUST00000088307 Krtap13-1Q8K198 168 aa6.47□□□□□ -1.37
BC003965-201ENSMUST00000088307 Sec61bQ9CQS8 96 aaKnown RBP6.47□□□□□ -1.37
BC003965-201ENSMUST00000088307 BC029722A0A0N4SW31 51 aa6.35□□□□□ -1.39
BC003965-201ENSMUST00000088307 Ubr4A2AN08 5180 aa6.33□□□□□ -1.4
BC003965-201ENSMUST00000088307 Krtap16-3Q8C1I6 86 aa6.28□□□□□ -1.4
BC003965-201ENSMUST00000088307 Lce1mQ9CR91 182 aa6.23□□□□□ -1.41
BC003965-201ENSMUST00000088307 Ush2AQ2QI47 5193 aa6.23□□□□□ -1.41
BC003965-201ENSMUST00000088307 Krtap1-5A2A590 122 aa6.2□□□□□ -1.42
BC003965-201ENSMUST00000088307 ZanO88799 5376 aa6.2□□□□□ -1.42
BC003965-201ENSMUST00000088307 Spink7Q6IE32 76 aa6.2□□□□□ -1.42
BC003965-201ENSMUST00000088307 Krtap19-3Q925H6 87 aa6.16□□□□□ -1.42
BC003965-201ENSMUST00000088307 Fat4Q2PZL6 4981 aa6.16□□□□□ -1.42
BC003965-201ENSMUST00000088307 Krtap19-1Q925H2 87 aa6.16□□□□□ -1.42
BC003965-201ENSMUST00000088307 Gm17402F6Z0L5 76 aa6.12□□□□□ -1.43
BC003965-201ENSMUST00000088307 Hmcn2A2AJ76 5100 aa6.11□□□□□ -1.43
BC003965-201ENSMUST00000088307 Gm18596A0A1W2P860 280 aa6.09□□□□□ -1.43
BC003965-201ENSMUST00000088307 4932415D10RikA0A1W2P6U8 4986 aa6.09□□□□□ -1.43
BC003965-201ENSMUST00000088307 Camk2n1Q6QWF9 78 aa6.05□□□□□ -1.44
BC003965-201ENSMUST00000088307 LorP18165 486 aa6.02□□□□□ -1.45
BC003965-201ENSMUST00000088307 Sprr2a3Q4KL71 83 aa6.02□□□□□ -1.45
BC003965-201ENSMUST00000088307 Sprr2a1Q9CQK8 83 aa6.02□□□□□ -1.45
BC003965-201ENSMUST00000088307 Krtap1-3A2A588 173 aa6.01□□□□□ -1.45
BC003965-201ENSMUST00000088307 Rnf213E9Q555 5152 aaKnown RBP5.94□□□□□ -1.46
BC003965-201ENSMUST00000088307 Krtap1-4Q3V2D6 188 aa5.91□□□□□ -1.46
BC003965-201ENSMUST00000088307 Gm9789Q8BIG3 52 aa5.84□□□□□ -1.47
BC003965-201ENSMUST00000088307 Lce1jD3YUU5 139 aa5.83□□□□□ -1.48
BC003965-201ENSMUST00000088307 Tnp1P10856 55 aa5.81□□□□□ -1.48
BC003965-201ENSMUST00000088307 Gm7735D3YX18 52 aa5.76□□□□□ -1.49
BC003965-201ENSMUST00000088307 Krtap17-1A2A5X6 109 aa5.74□□□□□ -1.49
BC003965-201ENSMUST00000088307 Prm1P02319 51 aa5.73□□□□□ -1.49
BC003965-201ENSMUST00000088307 Krtap12-1Q9Z287 130 aa5.71□□□□□ -1.5
BC003965-201ENSMUST00000088307 Krtap19-9aF8WH65 55 aa5.63□□□□□ -1.51
BC003965-201ENSMUST00000088307 Krtap9-5A2A5X3 358 aa5.5□□□□□ -1.53
BC003965-201ENSMUST00000088307 Krtap19-2Q925I0 141 aa5.47□□□□□ -1.53
BC003965-201ENSMUST00000088307 Lce1iQ9D6P5 149 aa5.43□□□□□ -1.54
BC003965-201ENSMUST00000088307 SspoQ8CG65 4998 aa5.42□□□□□ -1.54
BC003965-201ENSMUST00000088307 2310046K23RikA0A0A6YVW6 87 aa5.4□□□□□ -1.55
BC003965-201ENSMUST00000088307 Lce1a2Q9D1K4 149 aa5.39□□□□□ -1.55
BC003965-201ENSMUST00000088307 A0A1Y7VJH8 109 aa5.35□□□□□ -1.55
BC003965-201ENSMUST00000088307 Gm10061D3Z714 54 aa5.34□□□□□ -1.55
BC003965-201ENSMUST00000088307 Krtap9-3Q3V2C1 136 aa5.25□□□□□ -1.57
BC003965-201ENSMUST00000088307 Mdn1A2ANY6 5589 aaKnown RBP5.23□□□□□ -1.57
BC003965-201ENSMUST00000088307 Lce1dQ9D731 133 aa5.22□□□□□ -1.57
BC003965-201ENSMUST00000088307 Krtap28-10A0A1Y7VP58 119 aa5.21□□□□□ -1.58
BC003965-201ENSMUST00000088307 Krtap8-1O08633 61 aa5.2□□□□□ -1.58
BC003965-201ENSMUST00000088307 Krtap19-9bQ99NG9 58 aa5.19□□□□□ -1.58
BC003965-201ENSMUST00000088307 Gm6358A0A087WPH4 74 aa5.16□□□□□ -1.58
BC003965-201ENSMUST00000088307 Muc5bE9Q5I3 4800 aa5.16□□□□□ -1.58
BC003965-201ENSMUST00000088307 Mt2P02798 61 aa5.13□□□□□ -1.59
BC003965-201ENSMUST00000088307 Lce1hQ9D6R3 140 aa5.11□□□□□ -1.59
BC003965-201ENSMUST00000088307 Gm11569B1AQB1 180 aa5.07□□□□□ -1.6
BC003965-201ENSMUST00000088307 Krtap31-1Q9D644 177 aa4.99□□□□□ -1.61
BC003965-201ENSMUST00000088307 A030005L19RikA0A1Y7VIU2 113 aa4.98□□□□□ -1.61
BC003965-201ENSMUST00000088307 Lce1eQ9D139 143 aa4.97□□□□□ -1.61
BC003965-201ENSMUST00000088307 Krtap4-1Q3UUY3 169 aa4.94□□□□□ -1.62
BC003965-201ENSMUST00000088307 4933428G20RikQ9D3X4 101 aa4.94□□□□□ -1.62
BC003965-201ENSMUST00000088307 Gm7544A0A1Y7VJ58 118 aa4.93□□□□□ -1.62
BC003965-201ENSMUST00000088307 A0A1Y7VLE6 161 aa4.89□□□□□ -1.63
BC003965-201ENSMUST00000088307 Gm11938Q9D3H4 131 aa4.86□□□□□ -1.63
BC003965-201ENSMUST00000088307 Sprr2gO70558 76 aa4.82□□□□□ -1.64
BC003965-201ENSMUST00000088307 A030005K14RikA0A1Y7VNY1 122 aa4.8□□□□□ -1.64
BC003965-201ENSMUST00000088307 Krtap22-2J3QNX6 67 aa4.8□□□□□ -1.64
BC003965-201ENSMUST00000088307 Krtap28-13A0A087WQP5 138 aa4.78□□□□□ -1.64
BC003965-201ENSMUST00000088307 Krtap4-6Q3V4B7 195 aa4.7□□□□□ -1.66
BC003965-201ENSMUST00000088307 Gm10272F7CZ33 110 aa4.69□□□□□ -1.66
BC003965-201ENSMUST00000088307 Lce1cQ9D1C5 147 aa4.65□□□□□ -1.67
BC003965-201ENSMUST00000088307 Sprr2dO70555 85 aa4.61□□□□□ -1.67
BC003965-201ENSMUST00000088307 Fsip2A2ARZ3 6995 aa4.6□□□□□ -1.67
BC003965-201ENSMUST00000088307 Gm11555B1AQ89 175 aa4.55□□□□□ -1.68
BC003965-201ENSMUST00000088307 Gm11563B1AQ90 168 aa4.55□□□□□ -1.68
BC003965-201ENSMUST00000088307 Gm10100J3QK64 120 aa4.55□□□□□ -1.68
BC003965-201ENSMUST00000088307 Krtap4-7Q9D732 168 aa4.55□□□□□ -1.68
BC003965-201ENSMUST00000088307 Krtap4-2B1AQ85 167 aa4.54□□□□□ -1.68
BC003965-201ENSMUST00000088307 Lce1gQ9D195 139 aa4.53□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms