RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Dnah2P0C6F1 4456 aa8,21□□□□□ -1,1
Upf1-201ENSMUST00000075666 Dync2h1Q45VK7 4306 aa8,18□□□□□ -1,1
Upf1-201ENSMUST00000075666 Kmt2aP55200 3966 aa8,1□□□□□ -1,11
Upf1-201ENSMUST00000075666 TnxbO35452 4006 aa8,08□□□□□ -1,12
Upf1-201ENSMUST00000075666 4933428G20RikQ9D3X4 101 aa8,07□□□□□ -1,12
Upf1-201ENSMUST00000075666 SacsQ9JLC8 4582 aa8,04□□□□□ -1,12
Upf1-201ENSMUST00000075666 Hectd4E9Q2E4 4418 aa8,04□□□□□ -1,12
Upf1-201ENSMUST00000075666 Dnah1E9Q8T7 4250 aa8,02□□□□□ -1,13
Upf1-201ENSMUST00000075666 PrkdcP97313 4128 aa7,99□□□□□ -1,13
Upf1-201ENSMUST00000075666 Krtap1-4Q3V2D6 188 aa7,95□□□□□ -1,14
Upf1-201ENSMUST00000075666 Dync1h1Q9JHU4 4644 aaKnown RBP7,93□□□□□ -1,14
Upf1-201ENSMUST00000075666 Dnah6E9Q0B6 4144 aa7,91□□□□□ -1,14
Upf1-201ENSMUST00000075666 Lrp1Q91ZX7 4545 aaKnown RBP7,87□□□□□ -1,15
Upf1-201ENSMUST00000075666 Krtap19-9aF8WH65 55 aa7,81□□□□□ -1,16
Upf1-201ENSMUST00000075666 Mycbp2Q7TPH6 4711 aa7,79□□□□□ -1,16
Upf1-201ENSMUST00000075666 Vps13bQ80TY5 3993 aa7,75□□□□□ -1,17
Upf1-201ENSMUST00000075666 Dnah7cA0A087WR13 4024 aa7,72□□□□□ -1,17
Upf1-201ENSMUST00000075666 Fat3Q8BNA6 4555 aa7,71□□□□□ -1,18
Upf1-201ENSMUST00000075666 Ryr1E9PZQ0 5035 aa7,71□□□□□ -1,18
Upf1-201ENSMUST00000075666 Krtap19-9bQ99NG9 58 aa7,64□□□□□ -1,19
Upf1-201ENSMUST00000075666 Krtap12-1Q9Z287 130 aa7,61□□□□□ -1,19
Upf1-201ENSMUST00000075666 Fat1A0A1L1SQU7 4645 aa7,6□□□□□ -1,19
Upf1-201ENSMUST00000075666 Dnah8Q91XQ0 4731 aa7,55□□□□□ -1,2
Upf1-201ENSMUST00000075666 Pkd1O08852 4293 aa7,55□□□□□ -1,2
Upf1-201ENSMUST00000075666 Ryr3A2AGL3 4863 aa7,54□□□□□ -1,2
Upf1-201ENSMUST00000075666 Dnah7aE9Q0T8 4024 aa7,54□□□□□ -1,2
Upf1-201ENSMUST00000075666 Krtap16-3Q8C1I6 86 aa7,51□□□□□ -1,21
Upf1-201ENSMUST00000075666 LorP18165 486 aa7,49□□□□□ -1,21
Upf1-201ENSMUST00000075666 Fat2Q5F226 4351 aa7,48□□□□□ -1,21
Upf1-201ENSMUST00000075666 Krtap19-3Q925H6 87 aa7,39□□□□□ -1,23
Upf1-201ENSMUST00000075666 HydinQ80W93 5154 aa7,36□□□□□ -1,23
Upf1-201ENSMUST00000075666 Fras1Q80T14 4010 aa7,34□□□□□ -1,23
Upf1-201ENSMUST00000075666 Krtap19-1Q925H2 87 aa7,34□□□□□ -1,23
Upf1-201ENSMUST00000075666 Gm18596A0A1W2P860 280 aa7,32□□□□□ -1,24
Upf1-201ENSMUST00000075666 Krtap8-1O08633 61 aa7,29□□□□□ -1,24
Upf1-201ENSMUST00000075666 Gm6358A0A087WPH4 74 aa7,29□□□□□ -1,24
Upf1-201ENSMUST00000075666 Kiaa1109A2AAE1 5005 aa7,29□□□□□ -1,24
Upf1-201ENSMUST00000075666 2310046K23RikA0A0A6YVW6 87 aa7,27□□□□□ -1,25
Upf1-201ENSMUST00000075666 Lrp2A2ARV4 4660 aa7,23□□□□□ -1,25
Upf1-201ENSMUST00000075666 Ryr2E9Q401 4966 aaKnown RBP7,22□□□□□ -1,25
Upf1-201ENSMUST00000075666 Herc2Q4U2R1 4836 aa7,14□□□□□ -1,27
Upf1-201ENSMUST00000075666 Kmt2cQ8BRH4 4903 aa7,04□□□□□ -1,28
Upf1-201ENSMUST00000075666 Krtap9-5A2A5X3 358 aa6,98□□□□□ -1,29
Upf1-201ENSMUST00000075666 Lce1jD3YUU5 139 aa6,97□□□□□ -1,29
Upf1-201ENSMUST00000075666 Lce1mQ9CR91 182 aa6,93□□□□□ -1,3
Upf1-201ENSMUST00000075666 Pkhd1l1Q80ZA4 4249 aa6,9□□□□□ -1,31
Upf1-201ENSMUST00000075666 Abca13Q5SSE9 5034 aa6,82□□□□□ -1,32
Upf1-201ENSMUST00000075666 Gm10100J3QK64 120 aa6,77□□□□□ -1,33
Upf1-201ENSMUST00000075666 Gm10272F7CZ33 110 aa6,73□□□□□ -1,33
Upf1-201ENSMUST00000075666 Dnhd1D3Z2X2 4750 aa6,72□□□□□ -1,33
Upf1-201ENSMUST00000075666 Krtap19-2Q925I0 141 aa6,72□□□□□ -1,33
Upf1-201ENSMUST00000075666 Pkhd1E9PZ36 4059 aa6,71□□□□□ -1,34
Upf1-201ENSMUST00000075666 Krtap1-3A2A588 173 aa6,7□□□□□ -1,34
Upf1-201ENSMUST00000075666 Mt2P02798 61 aa6,69□□□□□ -1,34
Upf1-201ENSMUST00000075666 Birc6O88738 4882 aa6,67□□□□□ -1,34
Upf1-201ENSMUST00000075666 PcloQ9QYX7 5068 aa6,64□□□□□ -1,35
Upf1-201ENSMUST00000075666 Lce3bQ9CQM7 98 aa6,59□□□□□ -1,35
Upf1-201ENSMUST00000075666 Prm1P02319 51 aa6,59□□□□□ -1,36
Upf1-201ENSMUST00000075666 Gm10142J3KMP7 120 aa6,58□□□□□ -1,36
Upf1-201ENSMUST00000075666 Sprr2kO70562 68 aa6,56□□□□□ -1,36
Upf1-201ENSMUST00000075666 Krtap22-2J3QNX6 67 aa6,51□□□□□ -1,37
Upf1-201ENSMUST00000075666 Sprr2gO70558 76 aa6,49□□□□□ -1,37
Upf1-201ENSMUST00000075666 Krtap9-3Q3V2C1 136 aa6,44□□□□□ -1,38
Upf1-201ENSMUST00000075666 Lce1iQ9D6P5 149 aa6,44□□□□□ -1,38
Upf1-201ENSMUST00000075666 Herc1E9PZP8 4859 aa6,4□□□□□ -1,38
Upf1-201ENSMUST00000075666 Lce3cQ91V05 98 aa6,4□□□□□ -1,38
Upf1-201ENSMUST00000075666 Gm7735D3YX18 52 aa6,4□□□□□ -1,39
Upf1-201ENSMUST00000075666 Lce1a2Q9D1K4 149 aa6,37□□□□□ -1,39
Upf1-201ENSMUST00000075666 Syne1Q6ZWR6 8799 aa6,32□□□□□ -1,4
Upf1-201ENSMUST00000075666 Lce1hQ9D6R3 140 aa6,3□□□□□ -1,4
Upf1-201ENSMUST00000075666 Lce3eF8VQJ0 98 aa6,3□□□□□ -1,4
Upf1-201ENSMUST00000075666 Lce3fQ6PAI4 98 aa6,3□□□□□ -1,4
Upf1-201ENSMUST00000075666 Gm9789Q8BIG3 52 aa6,29□□□□□ -1,4
Upf1-201ENSMUST00000075666 Lce3dE9Q8V1 98 aa6,29□□□□□ -1,4
Upf1-201ENSMUST00000075666 Ubr4A2AN08 5180 aa6,28□□□□□ -1,4
Upf1-201ENSMUST00000075666 Hmcn2A2AJ76 5100 aa6,22□□□□□ -1,41
Upf1-201ENSMUST00000075666 Krtap17-1A2A5X6 109 aa6,16□□□□□ -1,42
Upf1-201ENSMUST00000075666 Mdn1A2ANY6 5589 aaKnown RBP6,14□□□□□ -1,43
Upf1-201ENSMUST00000075666 Krtap19-4Q925H7 84 aa6,14□□□□□ -1,43
Upf1-201ENSMUST00000075666 Lce3aQ497I5 98 aa6,12□□□□□ -1,43
Upf1-201ENSMUST00000075666 4932415D10RikA0A1W2P6U8 4986 aa6,11□□□□□ -1,43
Upf1-201ENSMUST00000075666 ZanO88799 5376 aa6,09□□□□□ -1,43
Upf1-201ENSMUST00000075666 Gm11938Q9D3H4 131 aa6,07□□□□□ -1,44
Upf1-201ENSMUST00000075666 Sprr2dO70555 85 aa6,05□□□□□ -1,44
Upf1-201ENSMUST00000075666 Gm10061D3Z714 54 aa6,05□□□□□ -1,44
Upf1-201ENSMUST00000075666 Fat4Q2PZL6 4981 aa6,03□□□□□ -1,44
Upf1-201ENSMUST00000075666 Ush2AQ2QI47 5193 aa6,02□□□□□ -1,45
Upf1-201ENSMUST00000075666 Lce1dQ9D731 133 aa5,98□□□□□ -1,45
Upf1-201ENSMUST00000075666 Gm38119A0A0A6YX29 146 aa5,84□□□□□ -1,47
Upf1-201ENSMUST00000075666 Gm11569B1AQB1 180 aa5,83□□□□□ -1,48
Upf1-201ENSMUST00000075666 Lce1gQ9D195 139 aa5,79□□□□□ -1,48
Upf1-201ENSMUST00000075666 Rnf213E9Q555 5152 aaKnown RBP5,76□□□□□ -1,49
Upf1-201ENSMUST00000075666 Sprr2fO70557 76 aa5,74□□□□□ -1,49
Upf1-201ENSMUST00000075666 Lce1fB9EJP6 147 aa5,72□□□□□ -1,49
Upf1-201ENSMUST00000075666 Lce1cQ9D1C5 147 aa5,72□□□□□ -1,49
Upf1-201ENSMUST00000075666 Lce1lQ9D1G7 135 aa5,72□□□□□ -1,49
Upf1-201ENSMUST00000075666 Sprr2iO70560 76 aa5,72□□□□□ -1,49
Upf1-201ENSMUST00000075666 Gm11562A0PK51 136 aa5,71□□□□□ -1,49
Upf1-201ENSMUST00000075666 Gm10024A0A0A0MQA4 119 aa5,71□□□□□ -1,5
Upf1-201ENSMUST00000075666 Lce1eQ9D139 143 aa5,71□□□□□ -1,5
Retrieved 100 of 22,080 RNA–protein pairs in 44,9 ms