RNA–Protein interactions for RNA: ENSMUST00000056398.10

Lsm8-201, Transcript of U6 snRNA-associated Sm-like protein LSm8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm8, Length 807 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8-201ENSMUST00000056398 Gm11554B1AQB2 190 aa5.6□□□□□ -1.51
Lsm8-201ENSMUST00000056398 Prr15lQ8JZM2 100 aa5.6□□□□□ -1.51
Lsm8-201ENSMUST00000056398 Krtap1-4Q3V2D6 188 aa5.59□□□□□ -1.51
Lsm8-201ENSMUST00000056398 Naa38Q9D2U5 125 aa5.59□□□□□ -1.51
Lsm8-201ENSMUST00000056398 9230102O04RikA2ASX7 82 aa5.56□□□□□ -1.52
Lsm8-201ENSMUST00000056398 Samd13D3YUG0 102 aa5.56□□□□□ -1.52
Lsm8-201ENSMUST00000056398 Gm4491E0CX42 125 aa5.56□□□□□ -1.52
Lsm8-201ENSMUST00000056398 Chtf8P0CG14 533 aa5.56□□□□□ -1.52
Lsm8-201ENSMUST00000056398 Pxt1Q8K459 51 aa5.54□□□□□ -1.52
Lsm8-201ENSMUST00000056398 Gm10061D3Z714 54 aa5.53□□□□□ -1.52
Lsm8-201ENSMUST00000056398 Gm39115A0A1B0GSH7 232 aa5.51□□□□□ -1.53
Lsm8-201ENSMUST00000056398 Hist1h4aP62806 103 aaKnown RBP5.51□□□□□ -1.53
Lsm8-201ENSMUST00000056398 Gm45618A0A1B0GSA0 219 aa5.48□□□□□ -1.53
Lsm8-201ENSMUST00000056398 Gm11595B1AQA7 289 aa5.48□□□□□ -1.53
Lsm8-201ENSMUST00000056398 Spink8Q09TK9 105 aa5.48□□□□□ -1.53
Lsm8-201ENSMUST00000056398 Fam229bQ8CF36 80 aa5.47□□□□□ -1.53
Lsm8-201ENSMUST00000056398 Gm10318A0A1W2P728 225 aa5.44□□□□□ -1.54
Lsm8-201ENSMUST00000056398 Q8BGJ3 129 aa5.43□□□□□ -1.54
Lsm8-201ENSMUST00000056398 Ndufc1Q9CQY9 76 aa5.43□□□□□ -1.54
Lsm8-201ENSMUST00000056398 1700074P13RikQ9D9G7 251 aa5.43□□□□□ -1.54
Lsm8-201ENSMUST00000056398 SspoQ8CG65 4998 aa5.43□□□□□ -1.54
Lsm8-201ENSMUST00000056398 Krtap13-1Q8K198 168 aa5.41□□□□□ -1.54
Lsm8-201ENSMUST00000056398 Gm10999F6Q4M4 69 aa5.39□□□□□ -1.55
Lsm8-201ENSMUST00000056398 Gm29735A0A1B0GT06 219 aa5.37□□□□□ -1.55
Lsm8-201ENSMUST00000056398 Krtap1-5A2A590 122 aa5.37□□□□□ -1.55
Lsm8-201ENSMUST00000056398 Gm21887J3QQ04 176 aa5.37□□□□□ -1.55
Lsm8-201ENSMUST00000056398 4930507D05RikQ8C9C9 103 aa5.37□□□□□ -1.55
Lsm8-201ENSMUST00000056398 Fam240bJ3QMB3 78 aa5.35□□□□□ -1.55
Lsm8-201ENSMUST00000056398 Syne2Q6ZWQ0 6874 aaKnown RBP5.33□□□□□ -1.56
Lsm8-201ENSMUST00000056398 2310079G19RikQ9D6L6 185 aa5.29□□□□□ -1.56
Lsm8-201ENSMUST00000056398 Krtap12-1Q9Z287 130 aa5.28□□□□□ -1.56
Lsm8-201ENSMUST00000056398 Atox1O08997 68 aaKnown RBP5.27□□□□□ -1.57
Lsm8-201ENSMUST00000056398 Spint4Q9D263 159 aa5.27□□□□□ -1.57
Lsm8-201ENSMUST00000056398 Atp5eP56382 52 aa5.26□□□□□ -1.57
Lsm8-201ENSMUST00000056398 Gm45213A0A0U1RNZ6 101 aa5.25□□□□□ -1.57
Lsm8-201ENSMUST00000056398 2300003K06RikA2A4M0 262 aa5.25□□□□□ -1.57
Lsm8-201ENSMUST00000056398 Defb38Q7TNV7 63 aa5.25□□□□□ -1.57
Lsm8-201ENSMUST00000056398 Gm21798J3QNU5 87 aa5.24□□□□□ -1.57
Lsm8-201ENSMUST00000056398 Gm10160F6Y577 67 aa5.23□□□□□ -1.57
Lsm8-201ENSMUST00000056398 Gm10643Q3URG9 111 aa5.23□□□□□ -1.57
Lsm8-201ENSMUST00000056398 BatfO35284 125 aa5.2□□□□□ -1.58
Lsm8-201ENSMUST00000056398 B930094E09RikQ8C4T2 136 aa5.2□□□□□ -1.58
Lsm8-201ENSMUST00000056398 4930518I15RikQ3V2W7 57 aa5.19□□□□□ -1.58
Lsm8-201ENSMUST00000056398 Coa6Q8BGD8 79 aa5.17□□□□□ -1.58
Lsm8-201ENSMUST00000056398 Gm19426M0QWC7 77 aa5.16□□□□□ -1.58
Lsm8-201ENSMUST00000056398 Serp2Q6TAW2 65 aa5.14□□□□□ -1.59
Lsm8-201ENSMUST00000056398 Gm10142J3KMP7 120 aa5.12□□□□□ -1.59
Lsm8-201ENSMUST00000056398 Cox6b2Q80ZN9 88 aa5.11□□□□□ -1.59
Lsm8-201ENSMUST00000056398 Gm17606F6ZL36 78 aa5.1□□□□□ -1.59
Lsm8-201ENSMUST00000056398 B230307C23RikQ8BLB2 64 aa5.09□□□□□ -1.59
Lsm8-201ENSMUST00000056398 SptssbQ925E8 76 aa5.09□□□□□ -1.59
Lsm8-201ENSMUST00000056398 Gm20537G3UYK7 97 aa5.08□□□□□ -1.6
Lsm8-201ENSMUST00000056398 Krtap19-2Q925I0 141 aa5.07□□□□□ -1.6
Lsm8-201ENSMUST00000056398 BC029722A0A0N4SW31 51 aa5.06□□□□□ -1.6
Lsm8-201ENSMUST00000056398 Gm11596B1AQB0 205 aa5.06□□□□□ -1.6
Lsm8-201ENSMUST00000056398 Muc5bE9Q5I3 4800 aa5.05□□□□□ -1.6
Lsm8-201ENSMUST00000056398 Defb1P56386 69 aa5.04□□□□□ -1.6
Lsm8-201ENSMUST00000056398 CriptO70333 101 aa5.03□□□□□ -1.6
Lsm8-201ENSMUST00000056398 Anapc13Q8R034 74 aa5□□□□□ -1.61
Lsm8-201ENSMUST00000056398 Krtap19-9aF8WH65 55 aa4.97□□□□□ -1.61
Lsm8-201ENSMUST00000056398 Coa5Q99M07 74 aa4.97□□□□□ -1.61
Lsm8-201ENSMUST00000056398 Pla2g10Q9QXX3 151 aa4.97□□□□□ -1.61
Lsm8-201ENSMUST00000056398 Smim20D3Z7Q2 69 aa4.92□□□□□ -1.62
Lsm8-201ENSMUST00000056398 Smlr1J3QMJ4 66 aa4.91□□□□□ -1.62
Lsm8-201ENSMUST00000056398 Mdn1A2ANY6 5589 aaKnown RBP4.91□□□□□ -1.62
Lsm8-201ENSMUST00000056398 Gm10153A0A1B0GRL1 320 aa4.9□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Krtap4-6Q3V4B7 195 aa4.9□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Gm10382Q3V0T5 144 aa4.89□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Krtap4-8B1AQA8 209 aa4.88□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Prm2P07978 107 aa4.88□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Limd2Q8BGB5 128 aa4.88□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Spink7Q6IE32 76 aa4.86□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Gm6358A0A087WPH4 74 aa4.84□□□□□ -1.63
Lsm8-201ENSMUST00000056398 Gm20661K7N787 53 aa4.8□□□□□ -1.64
Lsm8-201ENSMUST00000056398 Lce1a2Q9D1K4 149 aa4.77□□□□□ -1.65
Lsm8-201ENSMUST00000056398 Lce1iQ9D6P5 149 aa4.77□□□□□ -1.65
Lsm8-201ENSMUST00000056398 Pet100P0DJE0 76 aa4.76□□□□□ -1.65
Lsm8-201ENSMUST00000056398 Sec61gP60060 68 aa4.74□□□□□ -1.65
Lsm8-201ENSMUST00000056398 Cdc42se1Q8BHL7 80 aa4.73□□□□□ -1.65
Lsm8-201ENSMUST00000056398 Gm11564A2A4L9 201 aa4.72□□□□□ -1.65
Lsm8-201ENSMUST00000056398 H2al1aQ5M8Q2 105 aa4.72□□□□□ -1.65
Lsm8-201ENSMUST00000056398 H2al1eQ810S6 105 aa4.72□□□□□ -1.65
Lsm8-201ENSMUST00000056398 Uqcr11Q9CPX8 56 aa4.72□□□□□ -1.65
Lsm8-201ENSMUST00000056398 Gm17402F6Z0L5 76 aa4.71□□□□□ -1.66
Lsm8-201ENSMUST00000056398 Serp1Q9Z1W5 66 aa4.71□□□□□ -1.66
Lsm8-201ENSMUST00000056398 Tmem258P61166 79 aa4.7□□□□□ -1.66
Lsm8-201ENSMUST00000056398 SnurfQ9WU12 71 aa4.69□□□□□ -1.66
Lsm8-201ENSMUST00000056398 Gm10272F7CZ33 110 aa4.68□□□□□ -1.66
Lsm8-201ENSMUST00000056398 Gm19935A0A1B0GSF9 52 aa4.67□□□□□ -1.66
Lsm8-201ENSMUST00000056398 Fsip2A2ARZ3 6995 aa4.66□□□□□ -1.66
Lsm8-201ENSMUST00000056398 Gm9955Q8CEJ8 102 aa4.66□□□□□ -1.66
Lsm8-201ENSMUST00000056398 Sprr2a3Q4KL71 83 aa4.65□□□□□ -1.67
Lsm8-201ENSMUST00000056398 Sprr2a1Q9CQK8 83 aa4.65□□□□□ -1.67
Lsm8-201ENSMUST00000056398 Phxr4P15974 95 aa4.63□□□□□ -1.67
Lsm8-201ENSMUST00000056398 Gm10197F6QEY5 67 aa4.62□□□□□ -1.67
Lsm8-201ENSMUST00000056398 Mt2P02798 61 aa4.62□□□□□ -1.67
Lsm8-201ENSMUST00000056398 Krtap5-4Q62220 223 aa4.6□□□□□ -1.67
Lsm8-201ENSMUST00000056398 H2al1bA0A087WP11 105 aa4.59□□□□□ -1.67
Lsm8-201ENSMUST00000056398 Ndufb1P0DN34 57 aa4.58□□□□□ -1.68
Lsm8-201ENSMUST00000056398 Krtap9-3Q3V2C1 136 aa4.56□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 150 ms