RNA–Protein interactions for RNA: ENSMUST00000056398.10

Lsm8-201, Transcript of U6 snRNA-associated Sm-like protein LSm8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm8, Length 807 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8-201ENSMUST00000056398 Mapk8ip2Q9ERE9 830 aa25.73■■□□□ 1.71
Lsm8-201ENSMUST00000056398 Chic1Q8CBW7 227 aa25.38■■□□□ 1.65
Lsm8-201ENSMUST00000056398 Gm35339A0A140LHH9 1649 aa24.57■■□□□ 1.52
Lsm8-201ENSMUST00000056398 NischQ80TM9 1593 aa24.29■■□□□ 1.48
Lsm8-201ENSMUST00000056398 Abcc9P70170 1546 aa23.51■■□□□ 1.35
Lsm8-201ENSMUST00000056398 Abcc8B2RUS7 1588 aa23.48■■□□□ 1.35
Lsm8-201ENSMUST00000056398 Phf23Q8BSN5 401 aa22.66■■□□□ 1.22
Lsm8-201ENSMUST00000056398 ScribQ80U72 1612 aa22.48■■□□□ 1.19
Lsm8-201ENSMUST00000056398 NacadQ5SWP3 1504 aa21.94■■□□□ 1.1
Lsm8-201ENSMUST00000056398 Kdm5dQ62240 1548 aa21.8■■□□□ 1.08
Lsm8-201ENSMUST00000056398 Dcaf1Q80TR8 1506 aa21.76■■□□□ 1.07
Lsm8-201ENSMUST00000056398 Sycp2Q9CUU3 1500 aa21.48■■□□□ 1.03
Lsm8-201ENSMUST00000056398 Gab3Q8BSM5 595 aa21.37■■□□□ 1.01
Lsm8-201ENSMUST00000056398 Rb1cc1Q9ESK9 1588 aa21.14■□□□□ 0.97
Lsm8-201ENSMUST00000056398 BicraF8VPZ9 1578 aa21.08■□□□□ 0.97
Lsm8-201ENSMUST00000056398 Plppr3Q7TPB0 716 aa21.05■□□□□ 0.96
Lsm8-201ENSMUST00000056398 Rhox8Q6VSS7 320 aa21.04■□□□□ 0.96
Lsm8-201ENSMUST00000056398 Crybg2B7ZCC2 1516 aa20.98■□□□□ 0.95
Lsm8-201ENSMUST00000056398 Ccdc180J3QNE4 1664 aa20.96■□□□□ 0.95
Lsm8-201ENSMUST00000056398 Baz1aO88379 1555 aa20.9■□□□□ 0.94
Lsm8-201ENSMUST00000056398 Pds5bQ4VA53 1446 aaKnown RBP20.62■□□□□ 0.89
Lsm8-201ENSMUST00000056398 Zcchc6Q5BLK4 1491 aaKnown RBP20.53■□□□□ 0.88
Lsm8-201ENSMUST00000056398 Atad2bE9Q166 1460 aaKnown RBP20.43■□□□□ 0.86
Lsm8-201ENSMUST00000056398 Senp3Q9EP97 568 aaKnown RBP20.39■□□□□ 0.85
Lsm8-201ENSMUST00000056398 Dnajc5bQ9CQ94 199 aa20.33■□□□□ 0.85
Lsm8-201ENSMUST00000056398 Thoc2B1AZI6 1594 aaKnown RBP20.29■□□□□ 0.84
Lsm8-201ENSMUST00000056398 Smarca2Q6DIC0 1577 aa20.28■□□□□ 0.84
Lsm8-201ENSMUST00000056398 Smarca4Q3TKT4 1613 aaKnown RBP20.21■□□□□ 0.83
Lsm8-201ENSMUST00000056398 Cecr2E9Q2Z1 1453 aa20.13■□□□□ 0.81
Lsm8-201ENSMUST00000056398 Ercc6F8VPZ5 1481 aa20.12■□□□□ 0.81
Lsm8-201ENSMUST00000056398 Iqgap2Q3UQ44 1575 aa20.08■□□□□ 0.8
Lsm8-201ENSMUST00000056398 Cc2d2aQ8CFW7 1633 aa19.94■□□□□ 0.78
Lsm8-201ENSMUST00000056398 Rtl1Q7M732 1744 aa19.93■□□□□ 0.78
Lsm8-201ENSMUST00000056398 Wdr62Q3U3T8 1523 aa19.92■□□□□ 0.78
Lsm8-201ENSMUST00000056398 Baz1bQ9Z277 1479 aa19.9■□□□□ 0.78
Lsm8-201ENSMUST00000056398 Fam135aQ6NS59 1506 aa19.9■□□□□ 0.78
Lsm8-201ENSMUST00000056398 Frmpd1A2AKB4 1549 aa19.89■□□□□ 0.77
Lsm8-201ENSMUST00000056398 Phldb1Q6PDH0 1371 aaKnown RBP19.86■□□□□ 0.77
Lsm8-201ENSMUST00000056398 Brd4Q9ESU6 1400 aaKnown RBP19.81■□□□□ 0.76
Lsm8-201ENSMUST00000056398 CftrP26361 1476 aa19.79■□□□□ 0.76
Lsm8-201ENSMUST00000056398 Cttnbp2B9EJA2 1648 aa19.7■□□□□ 0.74
Lsm8-201ENSMUST00000056398 Ccdc136Q3TVA9 1136 aa19.66■□□□□ 0.74
Lsm8-201ENSMUST00000056398 Synj1Q8CHC4 1574 aa19.65■□□□□ 0.74
Lsm8-201ENSMUST00000056398 Ubl4bQ9CQ84 188 aa19.63■□□□□ 0.73
Lsm8-201ENSMUST00000056398 Trim41Q5NCC3 630 aa19.56■□□□□ 0.72
Lsm8-201ENSMUST00000056398 Mrc2Q64449 1479 aa19.45■□□□□ 0.7
Lsm8-201ENSMUST00000056398 Unc13aQ4KUS2 1712 aa19.45■□□□□ 0.7
Lsm8-201ENSMUST00000056398 Esf1Q3V1V3 845 aaKnown RBP19.43■□□□□ 0.7
Lsm8-201ENSMUST00000056398 Fam163aQ8CAA5 168 aa19.41■□□□□ 0.7
Lsm8-201ENSMUST00000056398 Rsf1E9PWW9 1441 aaKnown RBP19.32■□□□□ 0.68
Lsm8-201ENSMUST00000056398 Kif15Q6P9L6 1387 aa19.22■□□□□ 0.67
Lsm8-201ENSMUST00000056398 Cux2P70298 1426 aa19.19■□□□□ 0.66
Lsm8-201ENSMUST00000056398 Lamc3Q9R0B6 1581 aa19.17■□□□□ 0.66
Lsm8-201ENSMUST00000056398 Golga3P55937 1487 aa19.09■□□□□ 0.65
Lsm8-201ENSMUST00000056398 Npm1Q61937 292 aaKnown RBP19.06■□□□□ 0.64
Lsm8-201ENSMUST00000056398 Cep164Q5DU05 1446 aa19■□□□□ 0.63
Lsm8-201ENSMUST00000056398 Top2bQ64511 1612 aa19■□□□□ 0.63
Lsm8-201ENSMUST00000056398 TnnQ80Z71 1560 aa18.96■□□□□ 0.63
Lsm8-201ENSMUST00000056398 Ccdc18Q640L5 1455 aa18.94■□□□□ 0.62
Lsm8-201ENSMUST00000056398 Cngb1E1AZ71 1325 aa18.92■□□□□ 0.62
Lsm8-201ENSMUST00000056398 Lrriq1Q0P5X1 1673 aa18.9■□□□□ 0.62
Lsm8-201ENSMUST00000056398 Kif21aQ9QXL2 1672 aa18.89■□□□□ 0.61
Lsm8-201ENSMUST00000056398 Fmn1Q05860 1466 aa18.88■□□□□ 0.61
Lsm8-201ENSMUST00000056398 LrpprcQ6PB66 1392 aaKnown RBP18.83■□□□□ 0.61
Lsm8-201ENSMUST00000056398 Dhx29Q6PGC1 1365 aaKnown RBP18.8■□□□□ 0.6
Lsm8-201ENSMUST00000056398 Camsap1A2AHC3 1581 aa18.79■□□□□ 0.6
Lsm8-201ENSMUST00000056398 Il27Q8K3I6 234 aa18.77■□□□□ 0.6
Lsm8-201ENSMUST00000056398 PogzQ8BZH4 1409 aaKnown RBP18.71■□□□□ 0.59
Lsm8-201ENSMUST00000056398 Urb2E9Q7L1 1524 aaKnown RBP18.7■□□□□ 0.58
Lsm8-201ENSMUST00000056398 Plb1Q3TTY0 1478 aa18.69■□□□□ 0.58
Lsm8-201ENSMUST00000056398 Eif4g3Q80XI3 1579 aaKnown RBP18.68■□□□□ 0.58
Lsm8-201ENSMUST00000056398 Crocc2F6XLV1 1638 aa18.66■□□□□ 0.58
Lsm8-201ENSMUST00000056398 Ift140E9PY46 1464 aa18.62■□□□□ 0.57
Lsm8-201ENSMUST00000056398 Duox2A2AQ99 1517 aa18.59■□□□□ 0.57
Lsm8-201ENSMUST00000056398 Grin2bQ01097 1482 aa18.59■□□□□ 0.57
Lsm8-201ENSMUST00000056398 Efcab5A0JP43 1406 aa18.57■□□□□ 0.56
Lsm8-201ENSMUST00000056398 Shroom2A2ALU4 1481 aa18.51■□□□□ 0.55
Lsm8-201ENSMUST00000056398 Ccdc88bQ4QRL3 1481 aa18.51■□□□□ 0.55
Lsm8-201ENSMUST00000056398 Kcna4Q61423 654 aa18.49■□□□□ 0.55
Lsm8-201ENSMUST00000056398 Top2aQ01320 1528 aaKnown RBP18.48■□□□□ 0.55
Lsm8-201ENSMUST00000056398 NrkQ9R0G8 1455 aa18.47■□□□□ 0.55
Lsm8-201ENSMUST00000056398 Disp1Q3TDN0 1521 aa18.45■□□□□ 0.54
Lsm8-201ENSMUST00000056398 Dnajc5P60904 198 aa18.45■□□□□ 0.54
Lsm8-201ENSMUST00000056398 Rusc2Q80U22 1514 aa18.44■□□□□ 0.54
Lsm8-201ENSMUST00000056398 Cc2d2bA0A286YDU8 1405 aa18.41■□□□□ 0.54
Lsm8-201ENSMUST00000056398 Hoxd11P23813 323 aa18.39■□□□□ 0.53
Lsm8-201ENSMUST00000056398 Nup160Q9Z0W3 1402 aaKnown RBP18.39■□□□□ 0.53
Lsm8-201ENSMUST00000056398 Pbrm1Q8BSQ9 1634 aaKnown RBP18.38■□□□□ 0.53
Lsm8-201ENSMUST00000056398 Samd9lQ69Z37 1561 aa18.35■□□□□ 0.53
Lsm8-201ENSMUST00000056398 Pabpn1Q8CCS6 302 aaKnown RBP18.35■□□□□ 0.53
Lsm8-201ENSMUST00000056398 Shroom4Q1W617 1475 aa18.33■□□□□ 0.52
Lsm8-201ENSMUST00000056398 HrcG5E8J6 738 aa18.32■□□□□ 0.52
Lsm8-201ENSMUST00000056398 Grin2aP35436 1464 aa18.26■□□□□ 0.51
Lsm8-201ENSMUST00000056398 PtprkP35822 1457 aa18.25■□□□□ 0.51
Lsm8-201ENSMUST00000056398 Rad54l2Q99NG0 1466 aa18.25■□□□□ 0.51
Lsm8-201ENSMUST00000056398 Magi3Q9EQJ9 1476 aa18.24■□□□□ 0.51
Lsm8-201ENSMUST00000056398 AqrQ8CFQ3 1481 aaKnown RBP18.22■□□□□ 0.51
Lsm8-201ENSMUST00000056398 Gpatch8A2A6A1 1505 aa18.2■□□□□ 0.5
Lsm8-201ENSMUST00000056398 Fgd6Q69ZL1 1399 aa18.18■□□□□ 0.5
Lsm8-201ENSMUST00000056398 SynmQ70IV5 1561 aa18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms