RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Gm20537G3UYK7 97 aa3.91□□□□□ -1.78
Clrn1-202ENSMUST00000055636 Gm4491E0CX42 125 aa3.91□□□□□ -1.78
Clrn1-202ENSMUST00000055636 Gm3880A0A1B0GSB3 72 aa3.89□□□□□ -1.79
Clrn1-202ENSMUST00000055636 A030005K14RikA0A1Y7VNY1 122 aa3.89□□□□□ -1.79
Clrn1-202ENSMUST00000055636 Kiaa1109A2AAE1 5005 aa3.88□□□□□ -1.79
Clrn1-202ENSMUST00000055636 HydinQ80W93 5154 aa3.88□□□□□ -1.79
Clrn1-202ENSMUST00000055636 Herc2Q4U2R1 4836 aa3.87□□□□□ -1.79
Clrn1-202ENSMUST00000055636 Rnase13Q5GAM7 153 aa3.85□□□□□ -1.79
Clrn1-202ENSMUST00000055636 Dnah8Q91XQ0 4731 aa3.85□□□□□ -1.79
Clrn1-202ENSMUST00000055636 Gm5965D3Z724 196 aa3.84□□□□□ -1.79
Clrn1-202ENSMUST00000055636 PcloQ9QYX7 5068 aa3.83□□□□□ -1.8
Clrn1-202ENSMUST00000055636 Cox6b2Q80ZN9 88 aa3.82□□□□□ -1.8
Clrn1-202ENSMUST00000055636 CriptO70333 101 aa3.81□□□□□ -1.8
Clrn1-202ENSMUST00000055636 Lrp2A2ARV4 4660 aa3.79□□□□□ -1.8
Clrn1-202ENSMUST00000055636 Krtap4-2B1AQ85 167 aa3.79□□□□□ -1.8
Clrn1-202ENSMUST00000055636 Rps29P62274 56 aa3.78□□□□□ -1.8
Clrn1-202ENSMUST00000055636 Gm5767A0A0J9YTU8 78 aa3.75□□□□□ -1.81
Clrn1-202ENSMUST00000055636 Gm10382Q3V0T5 144 aa3.74□□□□□ -1.81
Clrn1-202ENSMUST00000055636 Dnhd1D3Z2X2 4750 aa3.73□□□□□ -1.81
Clrn1-202ENSMUST00000055636 Birc6O88738 4882 aa3.73□□□□□ -1.81
Clrn1-202ENSMUST00000055636 Gm9955Q8CEJ8 102 aa3.71□□□□□ -1.82
Clrn1-202ENSMUST00000055636 2310057N15RikQ9D6T8 200 aa3.68□□□□□ -1.82
Clrn1-202ENSMUST00000055636 Ndufaf8A2AMZ4 74 aa3.67□□□□□ -1.82
Clrn1-202ENSMUST00000055636 Herc1E9PZP8 4859 aa3.65□□□□□ -1.83
Clrn1-202ENSMUST00000055636 Rpl37Q9D823 97 aa3.64□□□□□ -1.83
Clrn1-202ENSMUST00000055636 Gm7544A0A1Y7VJ58 118 aa3.64□□□□□ -1.83
Clrn1-202ENSMUST00000055636 Gm17606F6ZL36 78 aa3.63□□□□□ -1.83
Clrn1-202ENSMUST00000055636 Lce1mQ9CR91 182 aa3.62□□□□□ -1.83
Clrn1-202ENSMUST00000055636 Krtap3-1A2A591 98 aa3.6□□□□□ -1.83
Clrn1-202ENSMUST00000055636 Gm10318A0A1W2P728 225 aa3.58□□□□□ -1.84
Clrn1-202ENSMUST00000055636 Crct1Q6PAI5 102 aa3.56□□□□□ -1.84
Clrn1-202ENSMUST00000055636 A0A1Y7VJ07 166 aa3.55□□□□□ -1.84
Clrn1-202ENSMUST00000055636 Gm9112A2AI92 75 aa3.53□□□□□ -1.84
Clrn1-202ENSMUST00000055636 B930094E09RikQ8C4T2 136 aa3.52□□□□□ -1.85
Clrn1-202ENSMUST00000055636 Ubr4A2AN08 5180 aa3.5□□□□□ -1.85
Clrn1-202ENSMUST00000055636 Gm17416Q30KP4 66 aa3.49□□□□□ -1.85
Clrn1-202ENSMUST00000055636 Gm40193A0A1B0GT39 78 aa3.48□□□□□ -1.85
Clrn1-202ENSMUST00000055636 Gm19426M0QWC7 77 aa3.48□□□□□ -1.85
Clrn1-202ENSMUST00000055636 A030014E15RikA0A1Y7VJV2 120 aa3.46□□□□□ -1.86
Clrn1-202ENSMUST00000055636 Krtap17-1A2A5X6 109 aa3.46□□□□□ -1.86
Clrn1-202ENSMUST00000055636 Krtap7-1Q9D3I6 87 aa3.45□□□□□ -1.86
Clrn1-202ENSMUST00000055636 Ush2AQ2QI47 5193 aa3.45□□□□□ -1.86
Clrn1-202ENSMUST00000055636 Krtap13-1Q8K198 168 aa3.45□□□□□ -1.86
Clrn1-202ENSMUST00000055636 Fam229aB2KGE5 128 aa3.43□□□□□ -1.86
Clrn1-202ENSMUST00000055636 Krtap31-2Q8CAY5 177 aa3.43□□□□□ -1.86
Clrn1-202ENSMUST00000055636 Camk2n1Q6QWF9 78 aa3.4□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Krtap16-3Q8C1I6 86 aa3.4□□□□□ -1.87
Clrn1-202ENSMUST00000055636 ZanO88799 5376 aa3.4□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Gm18596A0A1W2P860 280 aa3.4□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Gm19402J3QJV4 266 aa3.39□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Gm19668J3QMD1 248 aa3.39□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Krtap31-1Q9D644 177 aa3.39□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Fat4Q2PZL6 4981 aa3.39□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Hmcn2A2AJ76 5100 aa3.38□□□□□ -1.87
Clrn1-202ENSMUST00000055636 BC029722A0A0N4SW31 51 aa3.36□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Krtap19-1Q925H2 87 aa3.34□□□□□ -1.87
Clrn1-202ENSMUST00000055636 Krtap19-3Q925H6 87 aa3.34□□□□□ -1.87
Clrn1-202ENSMUST00000055636 4932415D10RikA0A1W2P6U8 4986 aa3.34□□□□□ -1.88
Clrn1-202ENSMUST00000055636 Krtap1-5A2A590 122 aa3.3□□□□□ -1.88
Clrn1-202ENSMUST00000055636 Krtap1-3A2A588 173 aa3.3□□□□□ -1.88
Clrn1-202ENSMUST00000055636 LorP18165 486 aa3.3□□□□□ -1.88
Clrn1-202ENSMUST00000055636 Gm17402F6Z0L5 76 aa3.28□□□□□ -1.88
Clrn1-202ENSMUST00000055636 Rnf213E9Q555 5152 aaKnown RBP3.27□□□□□ -1.89
Clrn1-202ENSMUST00000055636 Spink7Q6IE32 76 aa3.25□□□□□ -1.89
Clrn1-202ENSMUST00000055636 Sprr2a3Q4KL71 83 aa3.24□□□□□ -1.89
Clrn1-202ENSMUST00000055636 Gm9789Q8BIG3 52 aa3.24□□□□□ -1.89
Clrn1-202ENSMUST00000055636 Sprr2a1Q9CQK8 83 aa3.24□□□□□ -1.89
Clrn1-202ENSMUST00000055636 Prm1P02319 51 aa3.23□□□□□ -1.89
Clrn1-202ENSMUST00000055636 Gm7735D3YX18 52 aa3.2□□□□□ -1.9
Clrn1-202ENSMUST00000055636 Lce1dQ9D731 133 aa3.19□□□□□ -1.9
Clrn1-202ENSMUST00000055636 A030003K21RikA0A1Y7VIM3 128 aa3.16□□□□□ -1.9
Clrn1-202ENSMUST00000055636 Lce1jD3YUU5 139 aa3.16□□□□□ -1.9
Clrn1-202ENSMUST00000055636 Krtap1-4Q3V2D6 188 aa3.16□□□□□ -1.9
Clrn1-202ENSMUST00000055636 Gm11562A0PK51 136 aa3.13□□□□□ -1.91
Clrn1-202ENSMUST00000055636 Krtap12-1Q9Z287 130 aa3.06□□□□□ -1.92
Clrn1-202ENSMUST00000055636 Gm6217A0A1Y7VJK9 128 aa3.02□□□□□ -1.93
Clrn1-202ENSMUST00000055636 Krtap19-9aF8WH65 55 aa3.01□□□□□ -1.93
Clrn1-202ENSMUST00000055636 Gm38119A0A0A6YX29 146 aa2.99□□□□□ -1.93
Clrn1-202ENSMUST00000055636 Krtap9-5A2A5X3 358 aa2.99□□□□□ -1.93
Clrn1-202ENSMUST00000055636 SspoQ8CG65 4998 aa2.98□□□□□ -1.93
Clrn1-202ENSMUST00000055636 Krtap19-2Q925I0 141 aa2.97□□□□□ -1.93
Clrn1-202ENSMUST00000055636 Lce1a1Q9CQH5 143 aa2.97□□□□□ -1.93
Clrn1-202ENSMUST00000055636 Lce1gQ9D195 139 aa2.97□□□□□ -1.93
Clrn1-202ENSMUST00000055636 Tnp1P10856 55 aa2.95□□□□□ -1.94
Clrn1-202ENSMUST00000055636 Gm10061D3Z714 54 aa2.95□□□□□ -1.94
Clrn1-202ENSMUST00000055636 Lce1iQ9D6P5 149 aa2.94□□□□□ -1.94
Clrn1-202ENSMUST00000055636 Lce1a2Q9D1K4 149 aa2.91□□□□□ -1.94
Clrn1-202ENSMUST00000055636 Mdn1A2ANY6 5589 aaKnown RBP2.84□□□□□ -1.95
Clrn1-202ENSMUST00000055636 A0A286YCP9 139 aa2.84□□□□□ -1.95
Clrn1-202ENSMUST00000055636 2310046K23RikA0A0A6YVW6 87 aa2.83□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Lce1lQ9D1G7 135 aa2.83□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Lce1bQ9D149 137 aa2.82□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Gm11569B1AQB1 180 aa2.82□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Krtap8-1O08633 61 aa2.82□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Gm6358A0A087WPH4 74 aa2.81□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Muc5bE9Q5I3 4800 aa2.8□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Krtap9-3Q3V2C1 136 aa2.8□□□□□ -1.96
Clrn1-202ENSMUST00000055636 Mt2P02798 61 aa2.77□□□□□ -1.97
Clrn1-202ENSMUST00000055636 Krtap19-9bQ99NG9 58 aa2.75□□□□□ -1.97
Clrn1-202ENSMUST00000055636 Lce1hQ9D6R3 140 aa2.74□□□□□ -1.97
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms