RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 CriptO70333 101 aa7.52□□□□□ -1.21
Msx3-201ENSMUST00000055353 Ryr2E9Q401 4966 aaKnown RBP7.51□□□□□ -1.21
Msx3-201ENSMUST00000055353 Gm9955Q8CEJ8 102 aa7.43□□□□□ -1.22
Msx3-201ENSMUST00000055353 Gm17606F6ZL36 78 aa7.41□□□□□ -1.22
Msx3-201ENSMUST00000055353 Dnah8Q91XQ0 4731 aa7.41□□□□□ -1.22
Msx3-201ENSMUST00000055353 Rpl37Q9D823 97 aa7.39□□□□□ -1.23
Msx3-201ENSMUST00000055353 2210017I01RikA0A0A6YVV1 95 aa7.37□□□□□ -1.23
Msx3-201ENSMUST00000055353 Krtap3-1A2A591 98 aa7.33□□□□□ -1.24
Msx3-201ENSMUST00000055353 Ryr1E9PZQ0 5035 aa7.32□□□□□ -1.24
Msx3-201ENSMUST00000055353 A0A1Y7VJH8 109 aa7.25□□□□□ -1.25
Msx3-201ENSMUST00000055353 Gm17416Q30KP4 66 aa7.22□□□□□ -1.25
Msx3-201ENSMUST00000055353 B930094E09RikQ8C4T2 136 aa7.17□□□□□ -1.26
Msx3-201ENSMUST00000055353 HydinQ80W93 5154 aa7.16□□□□□ -1.26
Msx3-201ENSMUST00000055353 Kiaa1109A2AAE1 5005 aa7.15□□□□□ -1.26
Msx3-201ENSMUST00000055353 Camk2n1Q6QWF9 78 aa7.12□□□□□ -1.27
Msx3-201ENSMUST00000055353 Herc2Q4U2R1 4836 aa7.07□□□□□ -1.28
Msx3-201ENSMUST00000055353 Krtap13-1Q8K198 168 aa7.03□□□□□ -1.28
Msx3-201ENSMUST00000055353 Lrp2A2ARV4 4660 aa7.02□□□□□ -1.29
Msx3-201ENSMUST00000055353 Gm19426M0QWC7 77 aa6.99□□□□□ -1.29
Msx3-201ENSMUST00000055353 Dnhd1D3Z2X2 4750 aa6.97□□□□□ -1.29
Msx3-201ENSMUST00000055353 BC029722A0A0N4SW31 51 aa6.93□□□□□ -1.3
Msx3-201ENSMUST00000055353 PcloQ9QYX7 5068 aa6.91□□□□□ -1.3
Msx3-201ENSMUST00000055353 Fam229aB2KGE5 128 aa6.91□□□□□ -1.3
Msx3-201ENSMUST00000055353 Krtap28-10A0A1Y7VP58 119 aa6.9□□□□□ -1.31
Msx3-201ENSMUST00000055353 Krtap7-1Q9D3I6 87 aa6.9□□□□□ -1.31
Msx3-201ENSMUST00000055353 Birc6O88738 4882 aa6.9□□□□□ -1.31
Msx3-201ENSMUST00000055353 Gm10318A0A1W2P728 225 aa6.89□□□□□ -1.31
Msx3-201ENSMUST00000055353 Gm19402J3QJV4 266 aa6.89□□□□□ -1.31
Msx3-201ENSMUST00000055353 Gm40193A0A1B0GT39 78 aa6.89□□□□□ -1.31
Msx3-201ENSMUST00000055353 Crct1Q6PAI5 102 aa6.81□□□□□ -1.32
Msx3-201ENSMUST00000055353 Krtap1-5A2A590 122 aa6.77□□□□□ -1.32
Msx3-201ENSMUST00000055353 Krtap16-3Q8C1I6 86 aa6.68□□□□□ -1.34
Msx3-201ENSMUST00000055353 A0A1Y7VLE6 161 aa6.67□□□□□ -1.34
Msx3-201ENSMUST00000055353 Gm17402F6Z0L5 76 aa6.66□□□□□ -1.34
Msx3-201ENSMUST00000055353 Gm19668J3QMD1 248 aa6.64□□□□□ -1.35
Msx3-201ENSMUST00000055353 Spink7Q6IE32 76 aa6.64□□□□□ -1.35
Msx3-201ENSMUST00000055353 Gm7544A0A1Y7VJ58 118 aa6.62□□□□□ -1.35
Msx3-201ENSMUST00000055353 Sprr2a3Q4KL71 83 aa6.61□□□□□ -1.35
Msx3-201ENSMUST00000055353 Sprr2a1Q9CQK8 83 aa6.61□□□□□ -1.35
Msx3-201ENSMUST00000055353 Krtap4-1Q3UUY3 169 aa6.59□□□□□ -1.35
Msx3-201ENSMUST00000055353 Krtap19-1Q925H2 87 aa6.55□□□□□ -1.36
Msx3-201ENSMUST00000055353 Krtap28-13A0A087WQP5 138 aa6.54□□□□□ -1.36
Msx3-201ENSMUST00000055353 A030005L19RikA0A1Y7VIU2 113 aa6.54□□□□□ -1.36
Msx3-201ENSMUST00000055353 Krtap19-3Q925H6 87 aa6.52□□□□□ -1.37
Msx3-201ENSMUST00000055353 Lce1mQ9CR91 182 aa6.52□□□□□ -1.37
Msx3-201ENSMUST00000055353 Herc1E9PZP8 4859 aa6.52□□□□□ -1.37
Msx3-201ENSMUST00000055353 Ubr4A2AN08 5180 aa6.5□□□□□ -1.37
Msx3-201ENSMUST00000055353 ZanO88799 5376 aa6.45□□□□□ -1.38
Msx3-201ENSMUST00000055353 Fat4Q2PZL6 4981 aa6.39□□□□□ -1.39
Msx3-201ENSMUST00000055353 Krtap1-4Q3V2D6 188 aa6.38□□□□□ -1.39
Msx3-201ENSMUST00000055353 Gm18596A0A1W2P860 280 aa6.37□□□□□ -1.39
Msx3-201ENSMUST00000055353 4932415D10RikA0A1W2P6U8 4986 aa6.37□□□□□ -1.39
Msx3-201ENSMUST00000055353 A030005K14RikA0A1Y7VNY1 122 aa6.37□□□□□ -1.39
Msx3-201ENSMUST00000055353 Gm11555B1AQ89 175 aa6.3□□□□□ -1.4
Msx3-201ENSMUST00000055353 Lce1jD3YUU5 139 aa6.27□□□□□ -1.41
Msx3-201ENSMUST00000055353 Ush2AQ2QI47 5193 aa6.26□□□□□ -1.41
Msx3-201ENSMUST00000055353 Hmcn2A2AJ76 5100 aa6.23□□□□□ -1.41
Msx3-201ENSMUST00000055353 Krtap1-3A2A588 173 aa6.18□□□□□ -1.42
Msx3-201ENSMUST00000055353 LorP18165 486 aa6.12□□□□□ -1.43
Msx3-201ENSMUST00000055353 Gm11563B1AQ90 168 aa6.11□□□□□ -1.43
Msx3-201ENSMUST00000055353 Krtap4-7Q9D732 168 aa6.11□□□□□ -1.43
Msx3-201ENSMUST00000055353 Krtap17-1A2A5X6 109 aa6.1□□□□□ -1.43
Msx3-201ENSMUST00000055353 Rnf213E9Q555 5152 aaKnown RBP6.09□□□□□ -1.43
Msx3-201ENSMUST00000055353 Krtap12-1Q9Z287 130 aa6.08□□□□□ -1.44
Msx3-201ENSMUST00000055353 Krtap19-9aF8WH65 55 aa6.03□□□□□ -1.44
Msx3-201ENSMUST00000055353 Krtap31-2Q8CAY5 177 aa6.01□□□□□ -1.45
Msx3-201ENSMUST00000055353 Prm1P02319 51 aa6.01□□□□□ -1.45
Msx3-201ENSMUST00000055353 Krtap31-1Q9D644 177 aa6□□□□□ -1.45
Msx3-201ENSMUST00000055353 Gm7735D3YX18 52 aa5.99□□□□□ -1.45
Msx3-201ENSMUST00000055353 Gm9789Q8BIG3 52 aa5.94□□□□□ -1.46
Msx3-201ENSMUST00000055353 Tnp1P10856 55 aa5.92□□□□□ -1.46
Msx3-201ENSMUST00000055353 Lce1iQ9D6P5 149 aa5.86□□□□□ -1.47
Msx3-201ENSMUST00000055353 Lce1a2Q9D1K4 149 aa5.84□□□□□ -1.48
Msx3-201ENSMUST00000055353 A0A286YCP9 139 aa5.79□□□□□ -1.48
Msx3-201ENSMUST00000055353 Krtap8-1O08633 61 aa5.78□□□□□ -1.48
Msx3-201ENSMUST00000055353 A030003K21RikA0A1Y7VIM3 128 aa5.77□□□□□ -1.49
Msx3-201ENSMUST00000055353 Krtap9-3Q3V2C1 136 aa5.74□□□□□ -1.49
Msx3-201ENSMUST00000055353 Krtap19-2Q925I0 141 aa5.74□□□□□ -1.49
Msx3-201ENSMUST00000055353 Krtap9-5A2A5X3 358 aa5.73□□□□□ -1.49
Msx3-201ENSMUST00000055353 A0A1Y7VJ07 166 aa5.72□□□□□ -1.49
Msx3-201ENSMUST00000055353 Gm6217A0A1Y7VJK9 128 aa5.72□□□□□ -1.49
Msx3-201ENSMUST00000055353 Krtap19-9bQ99NG9 58 aa5.69□□□□□ -1.5
Msx3-201ENSMUST00000055353 SspoQ8CG65 4998 aa5.67□□□□□ -1.5
Msx3-201ENSMUST00000055353 Lce1hQ9D6R3 140 aa5.64□□□□□ -1.51
Msx3-201ENSMUST00000055353 2310046K23RikA0A0A6YVW6 87 aa5.62□□□□□ -1.51
Msx3-201ENSMUST00000055353 A030014E15RikA0A1Y7VJV2 120 aa5.55□□□□□ -1.52
Msx3-201ENSMUST00000055353 Krtap4-2B1AQ85 167 aa5.43□□□□□ -1.54
Msx3-201ENSMUST00000055353 Mt2P02798 61 aa5.39□□□□□ -1.55
Msx3-201ENSMUST00000055353 Gm6358A0A087WPH4 74 aa5.38□□□□□ -1.55
Msx3-201ENSMUST00000055353 Lce1dQ9D731 133 aa5.35□□□□□ -1.55
Msx3-201ENSMUST00000055353 Muc5bE9Q5I3 4800 aa5.34□□□□□ -1.56
Msx3-201ENSMUST00000055353 Gm10061D3Z714 54 aa5.33□□□□□ -1.56
Msx3-201ENSMUST00000055353 Lce1bQ9D149 137 aa5.29□□□□□ -1.56
Msx3-201ENSMUST00000055353 Gm11562A0PK51 136 aa5.26□□□□□ -1.57
Msx3-201ENSMUST00000055353 Gm11569B1AQB1 180 aa5.18□□□□□ -1.58
Msx3-201ENSMUST00000055353 Lce1eQ9D139 143 aa5.16□□□□□ -1.58
Msx3-201ENSMUST00000055353 Gm10272F7CZ33 110 aa5.07□□□□□ -1.6
Msx3-201ENSMUST00000055353 4933428G20RikQ9D3X4 101 aa5.06□□□□□ -1.6
Msx3-201ENSMUST00000055353 Sprr2gO70558 76 aa5.06□□□□□ -1.6
Msx3-201ENSMUST00000055353 Mdn1A2ANY6 5589 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms