RNA–Protein interactions for RNA: ENSMUST00000044053.12

Shprh-201, Transcript of E3 ubiquitin-protein ligase SHPRH, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shprh, Length 9,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shprh-201ENSMUST00000044053 Krtap3-2Q9D638 99 aa2.87□□□□□ -1.95
Shprh-201ENSMUST00000044053 Krtap3-3Q9D7P0 99 aa2.87□□□□□ -1.95
Shprh-201ENSMUST00000044053 Krtap19-5O08632 62 aa2.86□□□□□ -1.95
Shprh-201ENSMUST00000044053 Gm19402J3QJV4 266 aa2.84□□□□□ -1.95
Shprh-201ENSMUST00000044053 Krtap13-1Q8K198 168 aa2.84□□□□□ -1.95
Shprh-201ENSMUST00000044053 Krtap7-1Q9D3I6 87 aa2.84□□□□□ -1.96
Shprh-201ENSMUST00000044053 Stard9Q80TF6 4561 aa2.84□□□□□ -1.96
Shprh-201ENSMUST00000044053 Fat3Q8BNA6 4555 aa2.83□□□□□ -1.96
Shprh-201ENSMUST00000044053 Dnah9B1AR51 4484 aa2.83□□□□□ -1.96
Shprh-201ENSMUST00000044053 Vps13dB1ART2 4390 aa2.82□□□□□ -1.96
Shprh-201ENSMUST00000044053 Pkd1O08852 4293 aa2.81□□□□□ -1.96
Shprh-201ENSMUST00000044053 Krtap3-1A2A591 98 aa2.8□□□□□ -1.96
Shprh-201ENSMUST00000044053 Dync2h1Q45VK7 4306 aa2.8□□□□□ -1.96
Shprh-201ENSMUST00000044053 Dnah2P0C6F1 4456 aa2.8□□□□□ -1.96
Shprh-201ENSMUST00000044053 Lrp1Q91ZX7 4545 aaKnown RBP2.79□□□□□ -1.96
Shprh-201ENSMUST00000044053 Mycbp2Q7TPH6 4711 aa2.78□□□□□ -1.96
Shprh-201ENSMUST00000044053 Pkhd1E9PZ36 4059 aa2.78□□□□□ -1.96
Shprh-201ENSMUST00000044053 Dnah17Q69Z23 4481 aa2.77□□□□□ -1.97
Shprh-201ENSMUST00000044053 Hectd4E9Q2E4 4418 aa2.77□□□□□ -1.97
Shprh-201ENSMUST00000044053 Fat2Q5F226 4351 aa2.76□□□□□ -1.97
Shprh-201ENSMUST00000044053 Gm6217A0A1Y7VJK9 128 aa2.75□□□□□ -1.97
Shprh-201ENSMUST00000044053 ApobE9Q414 4505 aa2.67□□□□□ -1.98
Shprh-201ENSMUST00000044053 Gm6358A0A087WPH4 74 aa2.64□□□□□ -1.99
Shprh-201ENSMUST00000044053 Pkhd1l1Q80ZA4 4249 aa2.64□□□□□ -1.99
Shprh-201ENSMUST00000044053 A030005K14RikA0A1Y7VNY1 122 aa2.57□□□□□ -2
Shprh-201ENSMUST00000044053 Sprr2a3Q4KL71 83 aa2.57□□□□□ -2
Shprh-201ENSMUST00000044053 Sprr2a1Q9CQK8 83 aa2.57□□□□□ -2
Shprh-201ENSMUST00000044053 LorP18165 486 aa2.56□□□□□ -2
Shprh-201ENSMUST00000044053 Krtap28-10A0A1Y7VP58 119 aa2.54□□□□□ -2
Shprh-201ENSMUST00000044053 PlecQ9QXS1 4691 aaKnown RBP2.53□□□□□ -2
Shprh-201ENSMUST00000044053 Lrp1bQ9JI18 4599 aa2.53□□□□□ -2
Shprh-201ENSMUST00000044053 Krtap1-5A2A590 122 aa2.52□□□□□ -2.01
Shprh-201ENSMUST00000044053 Krtap19-9aF8WH65 55 aa2.52□□□□□ -2.01
Shprh-201ENSMUST00000044053 A0A1Y7VJH8 109 aa2.51□□□□□ -2.01
Shprh-201ENSMUST00000044053 Sprr2kO70562 68 aa2.51□□□□□ -2.01
Shprh-201ENSMUST00000044053 Sprr2gO70558 76 aa2.5□□□□□ -2.01
Shprh-201ENSMUST00000044053 Dync1h1Q9JHU4 4644 aaKnown RBP2.49□□□□□ -2.01
Shprh-201ENSMUST00000044053 Lrp2A2ARV4 4660 aa2.49□□□□□ -2.01
Shprh-201ENSMUST00000044053 SacsQ9JLC8 4582 aa2.48□□□□□ -2.01
Shprh-201ENSMUST00000044053 Krtap1-4Q3V2D6 188 aa2.47□□□□□ -2.01
Shprh-201ENSMUST00000044053 Kiaa1109A2AAE1 5005 aa2.47□□□□□ -2.01
Shprh-201ENSMUST00000044053 Gm7544A0A1Y7VJ58 118 aa2.47□□□□□ -2.01
Shprh-201ENSMUST00000044053 Fat1A0A1L1SQU7 4645 aa2.47□□□□□ -2.01
Shprh-201ENSMUST00000044053 Krtap8-1O08633 61 aa2.46□□□□□ -2.02
Shprh-201ENSMUST00000044053 Krtap12-1Q9Z287 130 aa2.45□□□□□ -2.02
Shprh-201ENSMUST00000044053 HydinQ80W93 5154 aa2.44□□□□□ -2.02
Shprh-201ENSMUST00000044053 Ryr2E9Q401 4966 aaKnown RBP2.43□□□□□ -2.02
Shprh-201ENSMUST00000044053 Krtap19-9bQ99NG9 58 aa2.42□□□□□ -2.02
Shprh-201ENSMUST00000044053 Lce3bQ9CQM7 98 aa2.41□□□□□ -2.02
Shprh-201ENSMUST00000044053 PcloQ9QYX7 5068 aa2.37□□□□□ -2.03
Shprh-201ENSMUST00000044053 Lce3cQ91V05 98 aa2.37□□□□□ -2.03
Shprh-201ENSMUST00000044053 Herc2Q4U2R1 4836 aa2.37□□□□□ -2.03
Shprh-201ENSMUST00000044053 A030005L19RikA0A1Y7VIU2 113 aa2.37□□□□□ -2.03
Shprh-201ENSMUST00000044053 Lce3eF8VQJ0 98 aa2.36□□□□□ -2.03
Shprh-201ENSMUST00000044053 Lce3fQ6PAI4 98 aa2.36□□□□□ -2.03
Shprh-201ENSMUST00000044053 A0A1Y7VJ07 166 aa2.35□□□□□ -2.03
Shprh-201ENSMUST00000044053 Birc6O88738 4882 aa2.34□□□□□ -2.04
Shprh-201ENSMUST00000044053 Gm10272F7CZ33 110 aa2.34□□□□□ -2.04
Shprh-201ENSMUST00000044053 Krtap16-3Q8C1I6 86 aa2.34□□□□□ -2.04
Shprh-201ENSMUST00000044053 Krtap28-13A0A087WQP5 138 aa2.32□□□□□ -2.04
Shprh-201ENSMUST00000044053 Dnah8Q91XQ0 4731 aa2.31□□□□□ -2.04
Shprh-201ENSMUST00000044053 Kmt2cQ8BRH4 4903 aa2.31□□□□□ -2.04
Shprh-201ENSMUST00000044053 Lce3dE9Q8V1 98 aa2.31□□□□□ -2.04
Shprh-201ENSMUST00000044053 Dnhd1D3Z2X2 4750 aa2.3□□□□□ -2.04
Shprh-201ENSMUST00000044053 Ryr3A2AGL3 4863 aa2.3□□□□□ -2.04
Shprh-201ENSMUST00000044053 Lce3aQ497I5 98 aa2.29□□□□□ -2.04
Shprh-201ENSMUST00000044053 Lce1mQ9CR91 182 aa2.29□□□□□ -2.04
Shprh-201ENSMUST00000044053 Ubr4A2AN08 5180 aa2.29□□□□□ -2.04
Shprh-201ENSMUST00000044053 Krtap19-3Q925H6 87 aa2.29□□□□□ -2.04
Shprh-201ENSMUST00000044053 Gm10100J3QK64 120 aa2.28□□□□□ -2.05
Shprh-201ENSMUST00000044053 Krtap9-5A2A5X3 358 aa2.27□□□□□ -2.05
Shprh-201ENSMUST00000044053 Sprr2fO70557 76 aa2.27□□□□□ -2.05
Shprh-201ENSMUST00000044053 Mdn1A2ANY6 5589 aaKnown RBP2.26□□□□□ -2.05
Shprh-201ENSMUST00000044053 Gm10142J3KMP7 120 aa2.25□□□□□ -2.05
Shprh-201ENSMUST00000044053 Abca13Q5SSE9 5034 aa2.24□□□□□ -2.05
Shprh-201ENSMUST00000044053 Rnf213E9Q555 5152 aaKnown RBP2.24□□□□□ -2.05
Shprh-201ENSMUST00000044053 Gm10024A0A0A0MQA4 119 aa2.23□□□□□ -2.05
Shprh-201ENSMUST00000044053 2310046K23RikA0A0A6YVW6 87 aa2.23□□□□□ -2.05
Shprh-201ENSMUST00000044053 Lce1jD3YUU5 139 aa2.21□□□□□ -2.06
Shprh-201ENSMUST00000044053 Krtap17-1A2A5X6 109 aa2.2□□□□□ -2.06
Shprh-201ENSMUST00000044053 Krtap19-1Q925H2 87 aa2.2□□□□□ -2.06
Shprh-201ENSMUST00000044053 4932415D10RikA0A1W2P6U8 4986 aa2.19□□□□□ -2.06
Shprh-201ENSMUST00000044053 Herc1E9PZP8 4859 aa2.19□□□□□ -2.06
Shprh-201ENSMUST00000044053 ZanO88799 5376 aa2.18□□□□□ -2.06
Shprh-201ENSMUST00000044053 Mt2P02798 61 aa2.16□□□□□ -2.06
Shprh-201ENSMUST00000044053 Krtap1-3A2A588 173 aa2.14□□□□□ -2.07
Shprh-201ENSMUST00000044053 Gm38119A0A0A6YX29 146 aa2.13□□□□□ -2.07
Shprh-201ENSMUST00000044053 Prm1P02319 51 aa2.13□□□□□ -2.07
Shprh-201ENSMUST00000044053 Sprr2iO70560 76 aa2.12□□□□□ -2.07
Shprh-201ENSMUST00000044053 Lce1gQ9D195 139 aa2.1□□□□□ -2.07
Shprh-201ENSMUST00000044053 Lce1iQ9D6P5 149 aa2.1□□□□□ -2.07
Shprh-201ENSMUST00000044053 Lce1hQ9D6R3 140 aa2.1□□□□□ -2.07
Shprh-201ENSMUST00000044053 Sprr2eO70556 76 aa2.1□□□□□ -2.07
Shprh-201ENSMUST00000044053 Krtap19-2Q925I0 141 aa2.09□□□□□ -2.07
Shprh-201ENSMUST00000044053 Krtap22-2J3QNX6 67 aa2.09□□□□□ -2.08
Shprh-201ENSMUST00000044053 Sprr2dO70555 85 aa2.07□□□□□ -2.08
Shprh-201ENSMUST00000044053 Fat4Q2PZL6 4981 aa2.06□□□□□ -2.08
Shprh-201ENSMUST00000044053 Ush2AQ2QI47 5193 aa2.06□□□□□ -2.08
Shprh-201ENSMUST00000044053 Syne2Q6ZWQ0 6874 aaKnown RBP2.05□□□□□ -2.08
Shprh-201ENSMUST00000044053 Krtap4-1Q3UUY3 169 aa2.05□□□□□ -2.08
Retrieved 100 of 22,080 RNA–protein pairs in 174.1 ms