RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Rnase13Q5GAM7 153 aa11.08□□□□□ -0.64
Ccdc9-201ENSMUST00000041010 Kiaa1109A2AAE1 5005 aa11.06□□□□□ -0.64
Ccdc9-201ENSMUST00000041010 Prm2P07978 107 aa11.04□□□□□ -0.64
Ccdc9-201ENSMUST00000041010 Gm21887J3QQ04 176 aa11.02□□□□□ -0.65
Ccdc9-201ENSMUST00000041010 Mycbp2Q7TPH6 4711 aa11.01□□□□□ -0.65
Ccdc9-201ENSMUST00000041010 Gm5965D3Z724 196 aa11.01□□□□□ -0.65
Ccdc9-201ENSMUST00000041010 Ndufaf8A2AMZ4 74 aa11□□□□□ -0.65
Ccdc9-201ENSMUST00000041010 Krtap3-1A2A591 98 aa10.9□□□□□ -0.66
Ccdc9-201ENSMUST00000041010 Krtap15-1Q9QZU5 150 aa10.83□□□□□ -0.68
Ccdc9-201ENSMUST00000041010 Gm19426M0QWC7 77 aa10.81□□□□□ -0.68
Ccdc9-201ENSMUST00000041010 HydinQ80W93 5154 aa10.78□□□□□ -0.68
Ccdc9-201ENSMUST00000041010 Gm17416Q30KP4 66 aa10.74□□□□□ -0.69
Ccdc9-201ENSMUST00000041010 Krtap7-1Q9D3I6 87 aa10.73□□□□□ -0.69
Ccdc9-201ENSMUST00000041010 B930094E09RikQ8C4T2 136 aa10.73□□□□□ -0.69
Ccdc9-201ENSMUST00000041010 Lrp2A2ARV4 4660 aa10.58□□□□□ -0.72
Ccdc9-201ENSMUST00000041010 2210017I01RikA0A0A6YVV1 95 aa10.58□□□□□ -0.72
Ccdc9-201ENSMUST00000041010 Gm40193A0A1B0GT39 78 aa10.5□□□□□ -0.73
Ccdc9-201ENSMUST00000041010 PcloQ9QYX7 5068 aa10.49□□□□□ -0.73
Ccdc9-201ENSMUST00000041010 Lce1mQ9CR91 182 aa10.45□□□□□ -0.74
Ccdc9-201ENSMUST00000041010 Fam229aB2KGE5 128 aa10.44□□□□□ -0.74
Ccdc9-201ENSMUST00000041010 Sec61bQ9CQS8 96 aaKnown RBP10.44□□□□□ -0.74
Ccdc9-201ENSMUST00000041010 BC029722A0A0N4SW31 51 aa10.37□□□□□ -0.75
Ccdc9-201ENSMUST00000041010 Gm17402F6Z0L5 76 aa10.34□□□□□ -0.75
Ccdc9-201ENSMUST00000041010 Gm19668J3QMD1 248 aa10.31□□□□□ -0.76
Ccdc9-201ENSMUST00000041010 2310057N15RikQ9D6T8 200 aa10.23□□□□□ -0.77
Ccdc9-201ENSMUST00000041010 Gm19402J3QJV4 266 aa10.18□□□□□ -0.78
Ccdc9-201ENSMUST00000041010 Gm9112A2AI92 75 aa10.16□□□□□ -0.78
Ccdc9-201ENSMUST00000041010 Herc1E9PZP8 4859 aa10.15□□□□□ -0.78
Ccdc9-201ENSMUST00000041010 Krtap13-1Q8K198 168 aa10.13□□□□□ -0.79
Ccdc9-201ENSMUST00000041010 Sprr2a3Q4KL71 83 aa9.96□□□□□ -0.81
Ccdc9-201ENSMUST00000041010 Sprr2a1Q9CQK8 83 aa9.96□□□□□ -0.81
Ccdc9-201ENSMUST00000041010 Krtap16-3Q8C1I6 86 aa9.96□□□□□ -0.82
Ccdc9-201ENSMUST00000041010 Krtap1-5A2A590 122 aa9.95□□□□□ -0.82
Ccdc9-201ENSMUST00000041010 Gm18596A0A1W2P860 280 aa9.92□□□□□ -0.82
Ccdc9-201ENSMUST00000041010 Krtap19-1Q925H2 87 aa9.88□□□□□ -0.83
Ccdc9-201ENSMUST00000041010 Ush2AQ2QI47 5193 aa9.86□□□□□ -0.83
Ccdc9-201ENSMUST00000041010 Gm9789Q8BIG3 52 aa9.84□□□□□ -0.83
Ccdc9-201ENSMUST00000041010 Prm1P02319 51 aa9.83□□□□□ -0.84
Ccdc9-201ENSMUST00000041010 Krtap19-3Q925H6 87 aa9.82□□□□□ -0.84
Ccdc9-201ENSMUST00000041010 Hmcn2A2AJ76 5100 aa9.79□□□□□ -0.84
Ccdc9-201ENSMUST00000041010 Crct1Q6PAI5 102 aa9.78□□□□□ -0.84
Ccdc9-201ENSMUST00000041010 Gm7735D3YX18 52 aa9.72□□□□□ -0.85
Ccdc9-201ENSMUST00000041010 Spink7Q6IE32 76 aa9.71□□□□□ -0.86
Ccdc9-201ENSMUST00000041010 Krtap1-3A2A588 173 aa9.69□□□□□ -0.86
Ccdc9-201ENSMUST00000041010 Gm10318A0A1W2P728 225 aa9.61□□□□□ -0.87
Ccdc9-201ENSMUST00000041010 Camk2n1Q6QWF9 78 aa9.6□□□□□ -0.87
Ccdc9-201ENSMUST00000041010 Ubr4A2AN08 5180 aa9.56□□□□□ -0.88
Ccdc9-201ENSMUST00000041010 4932415D10RikA0A1W2P6U8 4986 aa9.54□□□□□ -0.88
Ccdc9-201ENSMUST00000041010 ZanO88799 5376 aa9.48□□□□□ -0.89
Ccdc9-201ENSMUST00000041010 Krtap1-4Q3V2D6 188 aa9.48□□□□□ -0.89
Ccdc9-201ENSMUST00000041010 LorP18165 486 aa9.38□□□□□ -0.91
Ccdc9-201ENSMUST00000041010 Rnf213E9Q555 5152 aaKnown RBP9.35□□□□□ -0.91
Ccdc9-201ENSMUST00000041010 Tnp1P10856 55 aa9.3□□□□□ -0.92
Ccdc9-201ENSMUST00000041010 Fat4Q2PZL6 4981 aa9.25□□□□□ -0.93
Ccdc9-201ENSMUST00000041010 Krtap17-1A2A5X6 109 aa9.22□□□□□ -0.93
Ccdc9-201ENSMUST00000041010 Krtap12-1Q9Z287 130 aa9.04□□□□□ -0.96
Ccdc9-201ENSMUST00000041010 Lce1jD3YUU5 139 aa8.99□□□□□ -0.97
Ccdc9-201ENSMUST00000041010 Krtap19-9aF8WH65 55 aa8.97□□□□□ -0.97
Ccdc9-201ENSMUST00000041010 SspoQ8CG65 4998 aa8.97□□□□□ -0.97
Ccdc9-201ENSMUST00000041010 2310046K23RikA0A0A6YVW6 87 aa8.86□□□□□ -0.99
Ccdc9-201ENSMUST00000041010 Gm10061D3Z714 54 aa8.78□□□□□ -1
Ccdc9-201ENSMUST00000041010 Krtap19-2Q925I0 141 aa8.75□□□□□ -1.01
Ccdc9-201ENSMUST00000041010 Krtap9-5A2A5X3 358 aa8.66□□□□□ -1.02
Ccdc9-201ENSMUST00000041010 Krtap8-1O08633 61 aa8.63□□□□□ -1.03
Ccdc9-201ENSMUST00000041010 Gm11562A0PK51 136 aa8.58□□□□□ -1.04
Ccdc9-201ENSMUST00000041010 Lce1iQ9D6P5 149 aa8.46□□□□□ -1.06
Ccdc9-201ENSMUST00000041010 Krtap19-9bQ99NG9 58 aa8.42□□□□□ -1.06
Ccdc9-201ENSMUST00000041010 Lce1a2Q9D1K4 149 aa8.35□□□□□ -1.07
Ccdc9-201ENSMUST00000041010 Muc5bE9Q5I3 4800 aa8.34□□□□□ -1.07
Ccdc9-201ENSMUST00000041010 Gm11569B1AQB1 180 aa8.29□□□□□ -1.08
Ccdc9-201ENSMUST00000041010 Krtap9-3Q3V2C1 136 aa8.26□□□□□ -1.09
Ccdc9-201ENSMUST00000041010 Gm6358A0A087WPH4 74 aa8.25□□□□□ -1.09
Ccdc9-201ENSMUST00000041010 Lce1hQ9D6R3 140 aa8.18□□□□□ -1.1
Ccdc9-201ENSMUST00000041010 Krtap4-2B1AQ85 167 aa8.08□□□□□ -1.12
Ccdc9-201ENSMUST00000041010 Mt2P02798 61 aa8.08□□□□□ -1.12
Ccdc9-201ENSMUST00000041010 Lce1dQ9D731 133 aa8.06□□□□□ -1.12
Ccdc9-201ENSMUST00000041010 4933428G20RikQ9D3X4 101 aa7.91□□□□□ -1.14
Ccdc9-201ENSMUST00000041010 Sprr2gO70558 76 aa7.89□□□□□ -1.15
Ccdc9-201ENSMUST00000041010 Lce1gQ9D195 139 aa7.87□□□□□ -1.15
Ccdc9-201ENSMUST00000041010 Lce1eQ9D139 143 aa7.76□□□□□ -1.17
Ccdc9-201ENSMUST00000041010 Gm11938Q9D3H4 131 aa7.76□□□□□ -1.17
Ccdc9-201ENSMUST00000041010 Syne2Q6ZWQ0 6874 aaKnown RBP7.72□□□□□ -1.17
Ccdc9-201ENSMUST00000041010 Sprr2dO70555 85 aa7.67□□□□□ -1.18
Ccdc9-201ENSMUST00000041010 Krtap22-2J3QNX6 67 aa7.67□□□□□ -1.18
Ccdc9-201ENSMUST00000041010 Gm11555B1AQ89 175 aa7.65□□□□□ -1.18
Ccdc9-201ENSMUST00000041010 Mdn1A2ANY6 5589 aaKnown RBP7.55□□□□□ -1.2
Ccdc9-201ENSMUST00000041010 Gm11596B1AQB0 205 aa7.53□□□□□ -1.2
Ccdc9-201ENSMUST00000041010 Krtap4-6Q3V4B7 195 aa7.53□□□□□ -1.2
Ccdc9-201ENSMUST00000041010 Krtap4-1Q3UUY3 169 aa7.39□□□□□ -1.23
Ccdc9-201ENSMUST00000041010 Gm10272F7CZ33 110 aa7.25□□□□□ -1.25
Ccdc9-201ENSMUST00000041010 Lce1cQ9D1C5 147 aa7.23□□□□□ -1.25
Ccdc9-201ENSMUST00000041010 Gm11564A2A4L9 201 aa7.18□□□□□ -1.26
Ccdc9-201ENSMUST00000041010 Gm11563B1AQ90 168 aa7.18□□□□□ -1.26
Ccdc9-201ENSMUST00000041010 Gm11595B1AQA7 289 aa7.18□□□□□ -1.26
Ccdc9-201ENSMUST00000041010 Krtap4-8B1AQA8 209 aa7.18□□□□□ -1.26
Ccdc9-201ENSMUST00000041010 Sprr2iO70560 76 aa7.17□□□□□ -1.26
Ccdc9-201ENSMUST00000041010 Gm10100J3QK64 120 aa7.09□□□□□ -1.28
Ccdc9-201ENSMUST00000041010 Krtap19-4Q925H7 84 aa7.02□□□□□ -1.29
Ccdc9-201ENSMUST00000041010 Lce1bQ9D149 137 aa7.01□□□□□ -1.29
Ccdc9-201ENSMUST00000041010 Lce1fB9EJP6 147 aa7□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 97.3 ms