RNA–Protein interactions for RNA: ENSMUST00000034388.9

Vps4a-201, Transcript of Vacuolar protein sorting-associated protein 4A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4a, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4a-201ENSMUST00000034388 Lrp1Q91ZX7 4545 aaKnown RBP8.9□□□□□ -0.99
Vps4a-201ENSMUST00000034388 Krtap3-1A2A591 98 aa8.89□□□□□ -0.99
Vps4a-201ENSMUST00000034388 Dnhd1D3Z2X2 4750 aa8.87□□□□□ -0.99
Vps4a-201ENSMUST00000034388 Krtap15-1Q9QZU5 150 aa8.86□□□□□ -0.99
Vps4a-201ENSMUST00000034388 Lce1mQ9CR91 182 aa8.78□□□□□ -1
Vps4a-201ENSMUST00000034388 Gm5965D3Z724 196 aa8.78□□□□□ -1
Vps4a-201ENSMUST00000034388 2210017I01RikA0A0A6YVV1 95 aa8.76□□□□□ -1.01
Vps4a-201ENSMUST00000034388 Gm9736A0A1W2P7N1 277 aa8.73□□□□□ -1.01
Vps4a-201ENSMUST00000034388 HydinQ80W93 5154 aa8.71□□□□□ -1.01
Vps4a-201ENSMUST00000034388 PcloQ9QYX7 5068 aa8.66□□□□□ -1.02
Vps4a-201ENSMUST00000034388 Mycbp2Q7TPH6 4711 aa8.64□□□□□ -1.03
Vps4a-201ENSMUST00000034388 Gm19426M0QWC7 77 aa8.62□□□□□ -1.03
Vps4a-201ENSMUST00000034388 B930094E09RikQ8C4T2 136 aa8.62□□□□□ -1.03
Vps4a-201ENSMUST00000034388 Gm21887J3QQ04 176 aa8.61□□□□□ -1.03
Vps4a-201ENSMUST00000034388 BC029722A0A0N4SW31 51 aa8.53□□□□□ -1.04
Vps4a-201ENSMUST00000034388 Gm17402F6Z0L5 76 aa8.5□□□□□ -1.05
Vps4a-201ENSMUST00000034388 Lrp2A2ARV4 4660 aa8.48□□□□□ -1.05
Vps4a-201ENSMUST00000034388 Gm18596A0A1W2P860 280 aa8.48□□□□□ -1.05
Vps4a-201ENSMUST00000034388 Herc1E9PZP8 4859 aa8.42□□□□□ -1.06
Vps4a-201ENSMUST00000034388 Krtap13-1Q8K198 168 aa8.37□□□□□ -1.07
Vps4a-201ENSMUST00000034388 Krtap7-1Q9D3I6 87 aa8.36□□□□□ -1.07
Vps4a-201ENSMUST00000034388 Gm40193A0A1B0GT39 78 aa8.33□□□□□ -1.08
Vps4a-201ENSMUST00000034388 Ndufaf8A2AMZ4 74 aa8.24□□□□□ -1.09
Vps4a-201ENSMUST00000034388 Krtap1-5A2A590 122 aa8.24□□□□□ -1.09
Vps4a-201ENSMUST00000034388 Fam229aB2KGE5 128 aa8.2□□□□□ -1.1
Vps4a-201ENSMUST00000034388 2310057N15RikQ9D6T8 200 aa8.2□□□□□ -1.1
Vps4a-201ENSMUST00000034388 Prm1P02319 51 aa8.17□□□□□ -1.1
Vps4a-201ENSMUST00000034388 Sec61bQ9CQS8 96 aaKnown RBP8.17□□□□□ -1.1
Vps4a-201ENSMUST00000034388 Sprr2a3Q4KL71 83 aa8.13□□□□□ -1.11
Vps4a-201ENSMUST00000034388 Sprr2a1Q9CQK8 83 aa8.13□□□□□ -1.11
Vps4a-201ENSMUST00000034388 Gm19402J3QJV4 266 aa8.11□□□□□ -1.11
Vps4a-201ENSMUST00000034388 Gm7735D3YX18 52 aa8.11□□□□□ -1.11
Vps4a-201ENSMUST00000034388 Gm9789Q8BIG3 52 aa8.11□□□□□ -1.11
Vps4a-201ENSMUST00000034388 Ush2AQ2QI47 5193 aa8.07□□□□□ -1.12
Vps4a-201ENSMUST00000034388 Hmcn2A2AJ76 5100 aa7.95□□□□□ -1.14
Vps4a-201ENSMUST00000034388 Spink7Q6IE32 76 aa7.94□□□□□ -1.14
Vps4a-201ENSMUST00000034388 Prm2P07978 107 aa7.91□□□□□ -1.14
Vps4a-201ENSMUST00000034388 Gm19668J3QMD1 248 aa7.87□□□□□ -1.15
Vps4a-201ENSMUST00000034388 Ubr4A2AN08 5180 aa7.87□□□□□ -1.15
Vps4a-201ENSMUST00000034388 Krtap16-3Q8C1I6 86 aa7.81□□□□□ -1.16
Vps4a-201ENSMUST00000034388 4932415D10RikA0A1W2P6U8 4986 aa7.81□□□□□ -1.16
Vps4a-201ENSMUST00000034388 Camk2n1Q6QWF9 78 aa7.77□□□□□ -1.17
Vps4a-201ENSMUST00000034388 Krtap1-3A2A588 173 aa7.76□□□□□ -1.17
Vps4a-201ENSMUST00000034388 Crct1Q6PAI5 102 aa7.76□□□□□ -1.17
Vps4a-201ENSMUST00000034388 Krtap19-1Q925H2 87 aa7.7□□□□□ -1.18
Vps4a-201ENSMUST00000034388 Krtap1-4Q3V2D6 188 aa7.64□□□□□ -1.19
Vps4a-201ENSMUST00000034388 Krtap19-3Q925H6 87 aa7.61□□□□□ -1.19
Vps4a-201ENSMUST00000034388 Gm10318A0A1W2P728 225 aa7.57□□□□□ -1.2
Vps4a-201ENSMUST00000034388 ZanO88799 5376 aa7.57□□□□□ -1.2
Vps4a-201ENSMUST00000034388 LorP18165 486 aa7.56□□□□□ -1.2
Vps4a-201ENSMUST00000034388 Gm9112A2AI92 75 aa7.53□□□□□ -1.2
Vps4a-201ENSMUST00000034388 Tnp1P10856 55 aa7.47□□□□□ -1.21
Vps4a-201ENSMUST00000034388 Fat4Q2PZL6 4981 aa7.45□□□□□ -1.22
Vps4a-201ENSMUST00000034388 Rnf213E9Q555 5152 aaKnown RBP7.39□□□□□ -1.23
Vps4a-201ENSMUST00000034388 Krtap19-9aF8WH65 55 aa7.26□□□□□ -1.25
Vps4a-201ENSMUST00000034388 Krtap12-1Q9Z287 130 aa7.23□□□□□ -1.25
Vps4a-201ENSMUST00000034388 Lce1jD3YUU5 139 aa7.22□□□□□ -1.25
Vps4a-201ENSMUST00000034388 Gm10061D3Z714 54 aa7.21□□□□□ -1.26
Vps4a-201ENSMUST00000034388 2310046K23RikA0A0A6YVW6 87 aa7.12□□□□□ -1.27
Vps4a-201ENSMUST00000034388 Krtap8-1O08633 61 aa7.12□□□□□ -1.27
Vps4a-201ENSMUST00000034388 SspoQ8CG65 4998 aa7.09□□□□□ -1.27
Vps4a-201ENSMUST00000034388 Gm11569B1AQB1 180 aa6.97□□□□□ -1.29
Vps4a-201ENSMUST00000034388 Krtap19-9bQ99NG9 58 aa6.97□□□□□ -1.29
Vps4a-201ENSMUST00000034388 Krtap19-2Q925I0 141 aa6.81□□□□□ -1.32
Vps4a-201ENSMUST00000034388 Krtap9-5A2A5X3 358 aa6.8□□□□□ -1.32
Vps4a-201ENSMUST00000034388 Lce1iQ9D6P5 149 aa6.79□□□□□ -1.32
Vps4a-201ENSMUST00000034388 Lce1a2Q9D1K4 149 aa6.75□□□□□ -1.33
Vps4a-201ENSMUST00000034388 Krtap17-1A2A5X6 109 aa6.73□□□□□ -1.33
Vps4a-201ENSMUST00000034388 Krtap4-2B1AQ85 167 aa6.65□□□□□ -1.35
Vps4a-201ENSMUST00000034388 Gm11562A0PK51 136 aa6.64□□□□□ -1.35
Vps4a-201ENSMUST00000034388 Krtap9-3Q3V2C1 136 aa6.63□□□□□ -1.35
Vps4a-201ENSMUST00000034388 Lce1gQ9D195 139 aa6.6□□□□□ -1.35
Vps4a-201ENSMUST00000034388 Lce1hQ9D6R3 140 aa6.59□□□□□ -1.35
Vps4a-201ENSMUST00000034388 Muc5bE9Q5I3 4800 aa6.56□□□□□ -1.36
Vps4a-201ENSMUST00000034388 Gm6358A0A087WPH4 74 aa6.48□□□□□ -1.37
Vps4a-201ENSMUST00000034388 Gm11555B1AQ89 175 aa6.47□□□□□ -1.37
Vps4a-201ENSMUST00000034388 Krtap4-6Q3V4B7 195 aa6.38□□□□□ -1.39
Vps4a-201ENSMUST00000034388 Gm11596B1AQB0 205 aa6.37□□□□□ -1.39
Vps4a-201ENSMUST00000034388 Syne2Q6ZWQ0 6874 aaKnown RBP6.36□□□□□ -1.39
Vps4a-201ENSMUST00000034388 Sprr2gO70558 76 aa6.33□□□□□ -1.4
Vps4a-201ENSMUST00000034388 4933428G20RikQ9D3X4 101 aa6.32□□□□□ -1.4
Vps4a-201ENSMUST00000034388 Mt2P02798 61 aa6.31□□□□□ -1.4
Vps4a-201ENSMUST00000034388 Lce1dQ9D731 133 aa6.3□□□□□ -1.4
Vps4a-201ENSMUST00000034388 Mdn1A2ANY6 5589 aaKnown RBP6.28□□□□□ -1.4
Vps4a-201ENSMUST00000034388 Krtap4-1Q3UUY3 169 aa6.26□□□□□ -1.41
Vps4a-201ENSMUST00000034388 Sprr2dO70555 85 aa6.2□□□□□ -1.42
Vps4a-201ENSMUST00000034388 Gm11938Q9D3H4 131 aa6.16□□□□□ -1.42
Vps4a-201ENSMUST00000034388 Gm11564A2A4L9 201 aa6.11□□□□□ -1.43
Vps4a-201ENSMUST00000034388 Gm11563B1AQ90 168 aa6.11□□□□□ -1.43
Vps4a-201ENSMUST00000034388 Gm11595B1AQA7 289 aa6.11□□□□□ -1.43
Vps4a-201ENSMUST00000034388 Krtap4-8B1AQA8 209 aa6.11□□□□□ -1.43
Vps4a-201ENSMUST00000034388 Lce1eQ9D139 143 aa6.09□□□□□ -1.43
Vps4a-201ENSMUST00000034388 Gm10272F7CZ33 110 aa5.94□□□□□ -1.46
Vps4a-201ENSMUST00000034388 Krtap22-2J3QNX6 67 aa5.94□□□□□ -1.46
Vps4a-201ENSMUST00000034388 Krtap4-9B1AQA9 244 aa5.93□□□□□ -1.46
Vps4a-201ENSMUST00000034388 Mt4P47945 62 aa5.89□□□□□ -1.47
Vps4a-201ENSMUST00000034388 Krtap19-4Q925H7 84 aa5.76□□□□□ -1.49
Vps4a-201ENSMUST00000034388 Fsip2A2ARZ3 6995 aa5.74□□□□□ -1.49
Vps4a-201ENSMUST00000034388 Lce1bQ9D149 137 aa5.73□□□□□ -1.49
Vps4a-201ENSMUST00000034388 Lce1cQ9D1C5 147 aa5.73□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 152.9 ms