RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 ApobE9Q414 4505 aa7,68□□□□□ -1,18
Ebf3-201ENSMUST00000033378 Lrp1bQ9JI18 4599 aa7,67□□□□□ -1,18
Ebf3-201ENSMUST00000033378 Dnah2P0C6F1 4456 aa7,62□□□□□ -1,19
Ebf3-201ENSMUST00000033378 Dync2h1Q45VK7 4306 aa7,59□□□□□ -1,19
Ebf3-201ENSMUST00000033378 SacsQ9JLC8 4582 aa7,57□□□□□ -1,2
Ebf3-201ENSMUST00000033378 Krtap19-9bQ99NG9 58 aa7,55□□□□□ -1,2
Ebf3-201ENSMUST00000033378 LorP18165 486 aa7,55□□□□□ -1,2
Ebf3-201ENSMUST00000033378 Gm6358A0A087WPH4 74 aa7,55□□□□□ -1,2
Ebf3-201ENSMUST00000033378 Mycbp2Q7TPH6 4711 aa7,51□□□□□ -1,21
Ebf3-201ENSMUST00000033378 Krtap12-1Q9Z287 130 aa7,51□□□□□ -1,21
Ebf3-201ENSMUST00000033378 Ryr1E9PZQ0 5035 aa7,49□□□□□ -1,21
Ebf3-201ENSMUST00000033378 Dync1h1Q9JHU4 4644 aaKnown RBP7,48□□□□□ -1,21
Ebf3-201ENSMUST00000033378 Kmt2aP55200 3966 aa7,39□□□□□ -1,23
Ebf3-201ENSMUST00000033378 TnxbO35452 4006 aa7,37□□□□□ -1,23
Ebf3-201ENSMUST00000033378 PrkdcP97313 4128 aa7,36□□□□□ -1,23
Ebf3-201ENSMUST00000033378 Dnah3Q8BW94 4083 aa7,33□□□□□ -1,24
Ebf3-201ENSMUST00000033378 Dnah6E9Q0B6 4144 aa7,32□□□□□ -1,24
Ebf3-201ENSMUST00000033378 Lrp1Q91ZX7 4545 aaKnown RBP7,32□□□□□ -1,24
Ebf3-201ENSMUST00000033378 Hectd4E9Q2E4 4418 aa7,32□□□□□ -1,24
Ebf3-201ENSMUST00000033378 Krtap8-1O08633 61 aa7,29□□□□□ -1,24
Ebf3-201ENSMUST00000033378 Dnah1E9Q8T7 4250 aa7,28□□□□□ -1,24
Ebf3-201ENSMUST00000033378 Krtap16-3Q8C1I6 86 aa7,23□□□□□ -1,25
Ebf3-201ENSMUST00000033378 Gm18596A0A1W2P860 280 aa7,2□□□□□ -1,26
Ebf3-201ENSMUST00000033378 Fat3Q8BNA6 4555 aa7,18□□□□□ -1,26
Ebf3-201ENSMUST00000033378 Fat1A0A1L1SQU7 4645 aa7,17□□□□□ -1,26
Ebf3-201ENSMUST00000033378 Krtap19-3Q925H6 87 aa7,16□□□□□ -1,26
Ebf3-201ENSMUST00000033378 Dnah8Q91XQ0 4731 aa7,16□□□□□ -1,26
Ebf3-201ENSMUST00000033378 HydinQ80W93 5154 aa7,15□□□□□ -1,27
Ebf3-201ENSMUST00000033378 Ryr3A2AGL3 4863 aa7,14□□□□□ -1,27
Ebf3-201ENSMUST00000033378 Vps13bQ80TY5 3993 aa7,12□□□□□ -1,27
Ebf3-201ENSMUST00000033378 Krtap19-1Q925H2 87 aa7,06□□□□□ -1,28
Ebf3-201ENSMUST00000033378 Pkd1O08852 4293 aa7,02□□□□□ -1,29
Ebf3-201ENSMUST00000033378 Kiaa1109A2AAE1 5005 aa7□□□□□ -1,29
Ebf3-201ENSMUST00000033378 Lrp2A2ARV4 4660 aa6,94□□□□□ -1,3
Ebf3-201ENSMUST00000033378 Krtap9-5A2A5X3 358 aa6,93□□□□□ -1,3
Ebf3-201ENSMUST00000033378 Dnah7cA0A087WR13 4024 aa6,93□□□□□ -1,3
Ebf3-201ENSMUST00000033378 2310046K23RikA0A0A6YVW6 87 aa6,92□□□□□ -1,3
Ebf3-201ENSMUST00000033378 Herc2Q4U2R1 4836 aa6,89□□□□□ -1,31
Ebf3-201ENSMUST00000033378 Fras1Q80T14 4010 aa6,88□□□□□ -1,31
Ebf3-201ENSMUST00000033378 Dnah7aE9Q0T8 4024 aa6,82□□□□□ -1,32
Ebf3-201ENSMUST00000033378 Ryr2E9Q401 4966 aaKnown RBP6,81□□□□□ -1,32
Ebf3-201ENSMUST00000033378 Lce1mQ9CR91 182 aa6,8□□□□□ -1,32
Ebf3-201ENSMUST00000033378 Fat2Q5F226 4351 aa6,79□□□□□ -1,32
Ebf3-201ENSMUST00000033378 Gm10100J3QK64 120 aa6,74□□□□□ -1,33
Ebf3-201ENSMUST00000033378 Sprr2kO70562 68 aa6,73□□□□□ -1,33
Ebf3-201ENSMUST00000033378 Kmt2cQ8BRH4 4903 aa6,72□□□□□ -1,33
Ebf3-201ENSMUST00000033378 Gm10272F7CZ33 110 aa6,71□□□□□ -1,33
Ebf3-201ENSMUST00000033378 Lce1jD3YUU5 139 aa6,69□□□□□ -1,34
Ebf3-201ENSMUST00000033378 Mt2P02798 61 aa6,62□□□□□ -1,35
Ebf3-201ENSMUST00000033378 Lce3bQ9CQM7 98 aa6,59□□□□□ -1,36
Ebf3-201ENSMUST00000033378 Krtap19-2Q925I0 141 aa6,57□□□□□ -1,36
Ebf3-201ENSMUST00000033378 PcloQ9QYX7 5068 aa6,55□□□□□ -1,36
Ebf3-201ENSMUST00000033378 Gm10142J3KMP7 120 aa6,54□□□□□ -1,36
Ebf3-201ENSMUST00000033378 Lce3cQ91V05 98 aa6,53□□□□□ -1,36
Ebf3-201ENSMUST00000033378 Krtap1-3A2A588 173 aa6,52□□□□□ -1,37
Ebf3-201ENSMUST00000033378 Krtap22-2J3QNX6 67 aa6,52□□□□□ -1,37
Ebf3-201ENSMUST00000033378 Dnhd1D3Z2X2 4750 aa6,48□□□□□ -1,37
Ebf3-201ENSMUST00000033378 Prm1P02319 51 aa6,46□□□□□ -1,38
Ebf3-201ENSMUST00000033378 Lce3eF8VQJ0 98 aa6,38□□□□□ -1,39
Ebf3-201ENSMUST00000033378 Lce3fQ6PAI4 98 aa6,38□□□□□ -1,39
Ebf3-201ENSMUST00000033378 Pkhd1E9PZ36 4059 aa6,36□□□□□ -1,39
Ebf3-201ENSMUST00000033378 Syne1Q6ZWR6 8799 aa6,32□□□□□ -1,4
Ebf3-201ENSMUST00000033378 Abca13Q5SSE9 5034 aa6,31□□□□□ -1,4
Ebf3-201ENSMUST00000033378 Sprr2gO70558 76 aa6,28□□□□□ -1,4
Ebf3-201ENSMUST00000033378 Gm7735D3YX18 52 aa6,28□□□□□ -1,4
Ebf3-201ENSMUST00000033378 Pkhd1l1Q80ZA4 4249 aa6,26□□□□□ -1,41
Ebf3-201ENSMUST00000033378 Mdn1A2ANY6 5589 aaKnown RBP6,24□□□□□ -1,41
Ebf3-201ENSMUST00000033378 Lce3dE9Q8V1 98 aa6,24□□□□□ -1,41
Ebf3-201ENSMUST00000033378 Birc6O88738 4882 aa6,24□□□□□ -1,41
Ebf3-201ENSMUST00000033378 Krtap9-3Q3V2C1 136 aa6,22□□□□□ -1,41
Ebf3-201ENSMUST00000033378 Gm9789Q8BIG3 52 aa6,19□□□□□ -1,42
Ebf3-201ENSMUST00000033378 Lce3aQ497I5 98 aa6,18□□□□□ -1,42
Ebf3-201ENSMUST00000033378 Herc1E9PZP8 4859 aa6,15□□□□□ -1,43
Ebf3-201ENSMUST00000033378 Lce1iQ9D6P5 149 aa6,15□□□□□ -1,43
Ebf3-201ENSMUST00000033378 Gm38119A0A0A6YX29 146 aa6,09□□□□□ -1,44
Ebf3-201ENSMUST00000033378 Ubr4A2AN08 5180 aa6,08□□□□□ -1,44
Ebf3-201ENSMUST00000033378 Lce1a2Q9D1K4 149 aa6,06□□□□□ -1,44
Ebf3-201ENSMUST00000033378 Gm10061D3Z714 54 aa6,04□□□□□ -1,44
Ebf3-201ENSMUST00000033378 Krtap19-4Q925H7 84 aa5,99□□□□□ -1,45
Ebf3-201ENSMUST00000033378 Lce1gQ9D195 139 aa5,97□□□□□ -1,45
Ebf3-201ENSMUST00000033378 Lce1hQ9D6R3 140 aa5,97□□□□□ -1,45
Ebf3-201ENSMUST00000033378 Sprr2iO70560 76 aa5,9□□□□□ -1,46
Ebf3-201ENSMUST00000033378 Lce1fB9EJP6 147 aa5,88□□□□□ -1,47
Ebf3-201ENSMUST00000033378 Lce1cQ9D1C5 147 aa5,88□□□□□ -1,47
Ebf3-201ENSMUST00000033378 Lce1lQ9D1G7 135 aa5,88□□□□□ -1,47
Ebf3-201ENSMUST00000033378 Lce1dQ9D731 133 aa5,88□□□□□ -1,47
Ebf3-201ENSMUST00000033378 4932415D10RikA0A1W2P6U8 4986 aa5,88□□□□□ -1,47
Ebf3-201ENSMUST00000033378 Lce1bQ9D149 137 aa5,85□□□□□ -1,47
Ebf3-201ENSMUST00000033378 Krtap17-1A2A5X6 109 aa5,83□□□□□ -1,48
Ebf3-201ENSMUST00000033378 Gm10024A0A0A0MQA4 119 aa5,82□□□□□ -1,48
Ebf3-201ENSMUST00000033378 Lce1eQ9D139 143 aa5,82□□□□□ -1,48
Ebf3-201ENSMUST00000033378 Fat4Q2PZL6 4981 aa5,81□□□□□ -1,48
Ebf3-201ENSMUST00000033378 Hmcn2A2AJ76 5100 aa5,8□□□□□ -1,48
Ebf3-201ENSMUST00000033378 Gm11569B1AQB1 180 aa5,8□□□□□ -1,48
Ebf3-201ENSMUST00000033378 ZanO88799 5376 aa5,74□□□□□ -1,49
Ebf3-201ENSMUST00000033378 Rnf213E9Q555 5152 aaKnown RBP5,71□□□□□ -1,5
Ebf3-201ENSMUST00000033378 Sprr2dO70555 85 aa5,71□□□□□ -1,5
Ebf3-201ENSMUST00000033378 Gm11938Q9D3H4 131 aa5,7□□□□□ -1,5
Ebf3-201ENSMUST00000033378 Muc16A0A140LJ72 8478 aa5,6□□□□□ -1,51
Ebf3-201ENSMUST00000033378 Sprr2eO70556 76 aa5,6□□□□□ -1,51
Retrieved 100 of 22,080 RNA–protein pairs in 11,2 ms