RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 SacsQ9JLC8 4582 aa9.42□□□□□ -0.9
Nckap1-201ENSMUST00000028386 LorP18165 486 aa9.4□□□□□ -0.9
Nckap1-201ENSMUST00000028386 ApobE9Q414 4505 aa9.38□□□□□ -0.91
Nckap1-201ENSMUST00000028386 Dync1h1Q9JHU4 4644 aaKnown RBP9.36□□□□□ -0.91
Nckap1-201ENSMUST00000028386 Kmt2aP55200 3966 aa9.36□□□□□ -0.91
Nckap1-201ENSMUST00000028386 Dync2h1Q45VK7 4306 aa9.34□□□□□ -0.91
Nckap1-201ENSMUST00000028386 Krtap1-5A2A590 122 aa9.29□□□□□ -0.92
Nckap1-201ENSMUST00000028386 Kiaa1109A2AAE1 5005 aa9.27□□□□□ -0.92
Nckap1-201ENSMUST00000028386 Dnah2P0C6F1 4456 aa9.26□□□□□ -0.93
Nckap1-201ENSMUST00000028386 Fat3Q8BNA6 4555 aa9.21□□□□□ -0.93
Nckap1-201ENSMUST00000028386 Lrp1Q91ZX7 4545 aaKnown RBP9.2□□□□□ -0.94
Nckap1-201ENSMUST00000028386 Herc2Q4U2R1 4836 aa9.15□□□□□ -0.94
Nckap1-201ENSMUST00000028386 Dnah6E9Q0B6 4144 aa9.13□□□□□ -0.95
Nckap1-201ENSMUST00000028386 Lrp2A2ARV4 4660 aa9.12□□□□□ -0.95
Nckap1-201ENSMUST00000028386 Krtap1-4Q3V2D6 188 aa9.09□□□□□ -0.95
Nckap1-201ENSMUST00000028386 Sprr2a3Q4KL71 83 aa9.07□□□□□ -0.96
Nckap1-201ENSMUST00000028386 Sprr2a1Q9CQK8 83 aa9.07□□□□□ -0.96
Nckap1-201ENSMUST00000028386 Krtap19-9aF8WH65 55 aa9.03□□□□□ -0.96
Nckap1-201ENSMUST00000028386 Fat1A0A1L1SQU7 4645 aa8.99□□□□□ -0.97
Nckap1-201ENSMUST00000028386 Dnah1E9Q8T7 4250 aa8.98□□□□□ -0.97
Nckap1-201ENSMUST00000028386 Gm19402J3QJV4 266 aa8.98□□□□□ -0.97
Nckap1-201ENSMUST00000028386 Dnah8Q91XQ0 4731 aa8.93□□□□□ -0.98
Nckap1-201ENSMUST00000028386 Gm6358A0A087WPH4 74 aa8.89□□□□□ -0.99
Nckap1-201ENSMUST00000028386 Lce1mQ9CR91 182 aa8.88□□□□□ -0.99
Nckap1-201ENSMUST00000028386 Hectd4E9Q2E4 4418 aa8.87□□□□□ -0.99
Nckap1-201ENSMUST00000028386 Krtap12-1Q9Z287 130 aa8.87□□□□□ -0.99
Nckap1-201ENSMUST00000028386 Dnah3Q8BW94 4083 aa8.84□□□□□ -0.99
Nckap1-201ENSMUST00000028386 4933428G20RikQ9D3X4 101 aa8.77□□□□□ -1.01
Nckap1-201ENSMUST00000028386 Krtap7-1Q9D3I6 87 aa8.73□□□□□ -1.01
Nckap1-201ENSMUST00000028386 Krtap8-1O08633 61 aa8.73□□□□□ -1.01
Nckap1-201ENSMUST00000028386 Krtap16-3Q8C1I6 86 aa8.72□□□□□ -1.01
Nckap1-201ENSMUST00000028386 Vps13bQ80TY5 3993 aa8.69□□□□□ -1.02
Nckap1-201ENSMUST00000028386 Fras1Q80T14 4010 aa8.68□□□□□ -1.02
Nckap1-201ENSMUST00000028386 Krtap19-3Q925H6 87 aa8.68□□□□□ -1.02
Nckap1-201ENSMUST00000028386 Pkd1O08852 4293 aa8.65□□□□□ -1.02
Nckap1-201ENSMUST00000028386 Dnah7cA0A087WR13 4024 aa8.64□□□□□ -1.03
Nckap1-201ENSMUST00000028386 Krtap19-9bQ99NG9 58 aa8.59□□□□□ -1.03
Nckap1-201ENSMUST00000028386 Ryr2E9Q401 4966 aaKnown RBP8.57□□□□□ -1.04
Nckap1-201ENSMUST00000028386 Dnah7aE9Q0T8 4024 aa8.57□□□□□ -1.04
Nckap1-201ENSMUST00000028386 PcloQ9QYX7 5068 aa8.56□□□□□ -1.04
Nckap1-201ENSMUST00000028386 Krtap19-1Q925H2 87 aa8.53□□□□□ -1.04
Nckap1-201ENSMUST00000028386 Kmt2cQ8BRH4 4903 aa8.48□□□□□ -1.05
Nckap1-201ENSMUST00000028386 Krtap9-5A2A5X3 358 aa8.43□□□□□ -1.06
Nckap1-201ENSMUST00000028386 Sprr2kO70562 68 aa8.42□□□□□ -1.06
Nckap1-201ENSMUST00000028386 Dnhd1D3Z2X2 4750 aa8.37□□□□□ -1.07
Nckap1-201ENSMUST00000028386 Mdn1A2ANY6 5589 aaKnown RBP8.36□□□□□ -1.07
Nckap1-201ENSMUST00000028386 Prm1P02319 51 aa8.31□□□□□ -1.08
Nckap1-201ENSMUST00000028386 Abca13Q5SSE9 5034 aa8.29□□□□□ -1.08
Nckap1-201ENSMUST00000028386 Fat2Q5F226 4351 aa8.29□□□□□ -1.08
Nckap1-201ENSMUST00000028386 Gm7735D3YX18 52 aa8.17□□□□□ -1.1
Nckap1-201ENSMUST00000028386 Krtap1-3A2A588 173 aa8.17□□□□□ -1.1
Nckap1-201ENSMUST00000028386 Birc6O88738 4882 aa8.14□□□□□ -1.11
Nckap1-201ENSMUST00000028386 Pkhd1E9PZ36 4059 aa8.05□□□□□ -1.12
Nckap1-201ENSMUST00000028386 Lce1jD3YUU5 139 aa8.03□□□□□ -1.12
Nckap1-201ENSMUST00000028386 Herc1E9PZP8 4859 aa8.01□□□□□ -1.13
Nckap1-201ENSMUST00000028386 Krtap19-2Q925I0 141 aa7.99□□□□□ -1.13
Nckap1-201ENSMUST00000028386 Gm9789Q8BIG3 52 aa7.97□□□□□ -1.13
Nckap1-201ENSMUST00000028386 Mt2P02798 61 aa7.96□□□□□ -1.14
Nckap1-201ENSMUST00000028386 Ubr4A2AN08 5180 aa7.93□□□□□ -1.14
Nckap1-201ENSMUST00000028386 Sprr2gO70558 76 aa7.84□□□□□ -1.15
Nckap1-201ENSMUST00000028386 Krtap22-2J3QNX6 67 aa7.81□□□□□ -1.16
Nckap1-201ENSMUST00000028386 4932415D10RikA0A1W2P6U8 4986 aa7.8□□□□□ -1.16
Nckap1-201ENSMUST00000028386 Gm10272F7CZ33 110 aa7.8□□□□□ -1.16
Nckap1-201ENSMUST00000028386 Rnf213E9Q555 5152 aaKnown RBP7.76□□□□□ -1.17
Nckap1-201ENSMUST00000028386 Pkhd1l1Q80ZA4 4249 aa7.72□□□□□ -1.17
Nckap1-201ENSMUST00000028386 Lce3bQ9CQM7 98 aa7.72□□□□□ -1.17
Nckap1-201ENSMUST00000028386 Gm10061D3Z714 54 aa7.71□□□□□ -1.17
Nckap1-201ENSMUST00000028386 Syne1Q6ZWR6 8799 aa7.69□□□□□ -1.18
Nckap1-201ENSMUST00000028386 Gm38119A0A0A6YX29 146 aa7.64□□□□□ -1.19
Nckap1-201ENSMUST00000028386 Fat4Q2PZL6 4981 aa7.61□□□□□ -1.19
Nckap1-201ENSMUST00000028386 Lce3cQ91V05 98 aa7.6□□□□□ -1.19
Nckap1-201ENSMUST00000028386 Gm10100J3QK64 120 aa7.53□□□□□ -1.2
Nckap1-201ENSMUST00000028386 Gm11569B1AQB1 180 aa7.53□□□□□ -1.2
Nckap1-201ENSMUST00000028386 Ush2AQ2QI47 5193 aa7.5□□□□□ -1.21
Nckap1-201ENSMUST00000028386 2310046K23RikA0A0A6YVW6 87 aa7.46□□□□□ -1.21
Nckap1-201ENSMUST00000028386 ZanO88799 5376 aa7.45□□□□□ -1.22
Nckap1-201ENSMUST00000028386 Lce3eF8VQJ0 98 aa7.35□□□□□ -1.23
Nckap1-201ENSMUST00000028386 Lce3fQ6PAI4 98 aa7.35□□□□□ -1.23
Nckap1-201ENSMUST00000028386 Lce1iQ9D6P5 149 aa7.35□□□□□ -1.23
Nckap1-201ENSMUST00000028386 Hmcn2A2AJ76 5100 aa7.3□□□□□ -1.24
Nckap1-201ENSMUST00000028386 Krtap17-1A2A5X6 109 aa7.27□□□□□ -1.25
Nckap1-201ENSMUST00000028386 Lce1a2Q9D1K4 149 aa7.25□□□□□ -1.25
Nckap1-201ENSMUST00000028386 Gm10142J3KMP7 120 aa7.24□□□□□ -1.25
Nckap1-201ENSMUST00000028386 Muc16A0A140LJ72 8478 aa7.22□□□□□ -1.25
Nckap1-201ENSMUST00000028386 Lce3dE9Q8V1 98 aa7.18□□□□□ -1.26
Nckap1-201ENSMUST00000028386 Krtap4-6Q3V4B7 195 aa7.17□□□□□ -1.26
Nckap1-201ENSMUST00000028386 Krtap4-2B1AQ85 167 aa7.13□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Sprr2iO70560 76 aa7.13□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Fsip2A2ARZ3 6995 aa7.12□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Mt4P47945 62 aa7.11□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Lce1gQ9D195 139 aa7.11□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Lce1hQ9D6R3 140 aa7.11□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Lce3aQ497I5 98 aa7.09□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Lce1bQ9D149 137 aa7.09□□□□□ -1.27
Nckap1-201ENSMUST00000028386 Lce1fB9EJP6 147 aa7.07□□□□□ -1.28
Nckap1-201ENSMUST00000028386 Lce1cQ9D1C5 147 aa7.07□□□□□ -1.28
Nckap1-201ENSMUST00000028386 Lce1lQ9D1G7 135 aa7.07□□□□□ -1.28
Nckap1-201ENSMUST00000028386 Lce1dQ9D731 133 aa7.07□□□□□ -1.28
Nckap1-201ENSMUST00000028386 Krtap9-3Q3V2C1 136 aa6.89□□□□□ -1.31
Nckap1-201ENSMUST00000028386 Lce1eQ9D139 143 aa6.88□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms