RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 SacsQ9JLC8 4582 aa9,42□□□□□ -0,9
Nckap1-201ENSMUST00000028386 LorP18165 486 aa9,4□□□□□ -0,9
Nckap1-201ENSMUST00000028386 ApobE9Q414 4505 aa9,38□□□□□ -0,91
Nckap1-201ENSMUST00000028386 Dync1h1Q9JHU4 4644 aaKnown RBP9,36□□□□□ -0,91
Nckap1-201ENSMUST00000028386 Kmt2aP55200 3966 aa9,36□□□□□ -0,91
Nckap1-201ENSMUST00000028386 Dync2h1Q45VK7 4306 aa9,34□□□□□ -0,91
Nckap1-201ENSMUST00000028386 Krtap1-5A2A590 122 aa9,29□□□□□ -0,92
Nckap1-201ENSMUST00000028386 Kiaa1109A2AAE1 5005 aa9,27□□□□□ -0,92
Nckap1-201ENSMUST00000028386 Dnah2P0C6F1 4456 aa9,26□□□□□ -0,93
Nckap1-201ENSMUST00000028386 Fat3Q8BNA6 4555 aa9,21□□□□□ -0,93
Nckap1-201ENSMUST00000028386 Lrp1Q91ZX7 4545 aaKnown RBP9,2□□□□□ -0,94
Nckap1-201ENSMUST00000028386 Herc2Q4U2R1 4836 aa9,15□□□□□ -0,94
Nckap1-201ENSMUST00000028386 Dnah6E9Q0B6 4144 aa9,13□□□□□ -0,95
Nckap1-201ENSMUST00000028386 Lrp2A2ARV4 4660 aa9,12□□□□□ -0,95
Nckap1-201ENSMUST00000028386 Krtap1-4Q3V2D6 188 aa9,09□□□□□ -0,95
Nckap1-201ENSMUST00000028386 Sprr2a3Q4KL71 83 aa9,07□□□□□ -0,96
Nckap1-201ENSMUST00000028386 Sprr2a1Q9CQK8 83 aa9,07□□□□□ -0,96
Nckap1-201ENSMUST00000028386 Krtap19-9aF8WH65 55 aa9,03□□□□□ -0,96
Nckap1-201ENSMUST00000028386 Fat1A0A1L1SQU7 4645 aa8,99□□□□□ -0,97
Nckap1-201ENSMUST00000028386 Dnah1E9Q8T7 4250 aa8,98□□□□□ -0,97
Nckap1-201ENSMUST00000028386 Gm19402J3QJV4 266 aa8,98□□□□□ -0,97
Nckap1-201ENSMUST00000028386 Dnah8Q91XQ0 4731 aa8,93□□□□□ -0,98
Nckap1-201ENSMUST00000028386 Gm6358A0A087WPH4 74 aa8,89□□□□□ -0,99
Nckap1-201ENSMUST00000028386 Lce1mQ9CR91 182 aa8,88□□□□□ -0,99
Nckap1-201ENSMUST00000028386 Hectd4E9Q2E4 4418 aa8,87□□□□□ -0,99
Nckap1-201ENSMUST00000028386 Krtap12-1Q9Z287 130 aa8,87□□□□□ -0,99
Nckap1-201ENSMUST00000028386 Dnah3Q8BW94 4083 aa8,84□□□□□ -0,99
Nckap1-201ENSMUST00000028386 4933428G20RikQ9D3X4 101 aa8,77□□□□□ -1,01
Nckap1-201ENSMUST00000028386 Krtap7-1Q9D3I6 87 aa8,73□□□□□ -1,01
Nckap1-201ENSMUST00000028386 Krtap8-1O08633 61 aa8,73□□□□□ -1,01
Nckap1-201ENSMUST00000028386 Krtap16-3Q8C1I6 86 aa8,72□□□□□ -1,01
Nckap1-201ENSMUST00000028386 Vps13bQ80TY5 3993 aa8,69□□□□□ -1,02
Nckap1-201ENSMUST00000028386 Fras1Q80T14 4010 aa8,68□□□□□ -1,02
Nckap1-201ENSMUST00000028386 Krtap19-3Q925H6 87 aa8,68□□□□□ -1,02
Nckap1-201ENSMUST00000028386 Pkd1O08852 4293 aa8,65□□□□□ -1,02
Nckap1-201ENSMUST00000028386 Dnah7cA0A087WR13 4024 aa8,64□□□□□ -1,03
Nckap1-201ENSMUST00000028386 Krtap19-9bQ99NG9 58 aa8,59□□□□□ -1,03
Nckap1-201ENSMUST00000028386 Ryr2E9Q401 4966 aaKnown RBP8,57□□□□□ -1,04
Nckap1-201ENSMUST00000028386 Dnah7aE9Q0T8 4024 aa8,57□□□□□ -1,04
Nckap1-201ENSMUST00000028386 PcloQ9QYX7 5068 aa8,56□□□□□ -1,04
Nckap1-201ENSMUST00000028386 Krtap19-1Q925H2 87 aa8,53□□□□□ -1,04
Nckap1-201ENSMUST00000028386 Kmt2cQ8BRH4 4903 aa8,48□□□□□ -1,05
Nckap1-201ENSMUST00000028386 Krtap9-5A2A5X3 358 aa8,43□□□□□ -1,06
Nckap1-201ENSMUST00000028386 Sprr2kO70562 68 aa8,42□□□□□ -1,06
Nckap1-201ENSMUST00000028386 Dnhd1D3Z2X2 4750 aa8,37□□□□□ -1,07
Nckap1-201ENSMUST00000028386 Mdn1A2ANY6 5589 aaKnown RBP8,36□□□□□ -1,07
Nckap1-201ENSMUST00000028386 Prm1P02319 51 aa8,31□□□□□ -1,08
Nckap1-201ENSMUST00000028386 Abca13Q5SSE9 5034 aa8,29□□□□□ -1,08
Nckap1-201ENSMUST00000028386 Fat2Q5F226 4351 aa8,29□□□□□ -1,08
Nckap1-201ENSMUST00000028386 Gm7735D3YX18 52 aa8,17□□□□□ -1,1
Nckap1-201ENSMUST00000028386 Krtap1-3A2A588 173 aa8,17□□□□□ -1,1
Nckap1-201ENSMUST00000028386 Birc6O88738 4882 aa8,14□□□□□ -1,11
Nckap1-201ENSMUST00000028386 Pkhd1E9PZ36 4059 aa8,05□□□□□ -1,12
Nckap1-201ENSMUST00000028386 Lce1jD3YUU5 139 aa8,03□□□□□ -1,12
Nckap1-201ENSMUST00000028386 Herc1E9PZP8 4859 aa8,01□□□□□ -1,13
Nckap1-201ENSMUST00000028386 Krtap19-2Q925I0 141 aa7,99□□□□□ -1,13
Nckap1-201ENSMUST00000028386 Gm9789Q8BIG3 52 aa7,97□□□□□ -1,13
Nckap1-201ENSMUST00000028386 Mt2P02798 61 aa7,96□□□□□ -1,14
Nckap1-201ENSMUST00000028386 Ubr4A2AN08 5180 aa7,93□□□□□ -1,14
Nckap1-201ENSMUST00000028386 Sprr2gO70558 76 aa7,84□□□□□ -1,15
Nckap1-201ENSMUST00000028386 Krtap22-2J3QNX6 67 aa7,81□□□□□ -1,16
Nckap1-201ENSMUST00000028386 4932415D10RikA0A1W2P6U8 4986 aa7,8□□□□□ -1,16
Nckap1-201ENSMUST00000028386 Gm10272F7CZ33 110 aa7,8□□□□□ -1,16
Nckap1-201ENSMUST00000028386 Rnf213E9Q555 5152 aaKnown RBP7,76□□□□□ -1,17
Nckap1-201ENSMUST00000028386 Pkhd1l1Q80ZA4 4249 aa7,72□□□□□ -1,17
Nckap1-201ENSMUST00000028386 Lce3bQ9CQM7 98 aa7,72□□□□□ -1,17
Nckap1-201ENSMUST00000028386 Gm10061D3Z714 54 aa7,71□□□□□ -1,17
Nckap1-201ENSMUST00000028386 Syne1Q6ZWR6 8799 aa7,69□□□□□ -1,18
Nckap1-201ENSMUST00000028386 Gm38119A0A0A6YX29 146 aa7,64□□□□□ -1,19
Nckap1-201ENSMUST00000028386 Fat4Q2PZL6 4981 aa7,61□□□□□ -1,19
Nckap1-201ENSMUST00000028386 Lce3cQ91V05 98 aa7,6□□□□□ -1,19
Nckap1-201ENSMUST00000028386 Gm10100J3QK64 120 aa7,53□□□□□ -1,2
Nckap1-201ENSMUST00000028386 Gm11569B1AQB1 180 aa7,53□□□□□ -1,2
Nckap1-201ENSMUST00000028386 Ush2AQ2QI47 5193 aa7,5□□□□□ -1,21
Nckap1-201ENSMUST00000028386 2310046K23RikA0A0A6YVW6 87 aa7,46□□□□□ -1,21
Nckap1-201ENSMUST00000028386 ZanO88799 5376 aa7,45□□□□□ -1,22
Nckap1-201ENSMUST00000028386 Lce3eF8VQJ0 98 aa7,35□□□□□ -1,23
Nckap1-201ENSMUST00000028386 Lce3fQ6PAI4 98 aa7,35□□□□□ -1,23
Nckap1-201ENSMUST00000028386 Lce1iQ9D6P5 149 aa7,35□□□□□ -1,23
Nckap1-201ENSMUST00000028386 Hmcn2A2AJ76 5100 aa7,3□□□□□ -1,24
Nckap1-201ENSMUST00000028386 Krtap17-1A2A5X6 109 aa7,27□□□□□ -1,25
Nckap1-201ENSMUST00000028386 Lce1a2Q9D1K4 149 aa7,25□□□□□ -1,25
Nckap1-201ENSMUST00000028386 Gm10142J3KMP7 120 aa7,24□□□□□ -1,25
Nckap1-201ENSMUST00000028386 Muc16A0A140LJ72 8478 aa7,22□□□□□ -1,25
Nckap1-201ENSMUST00000028386 Lce3dE9Q8V1 98 aa7,18□□□□□ -1,26
Nckap1-201ENSMUST00000028386 Krtap4-6Q3V4B7 195 aa7,17□□□□□ -1,26
Nckap1-201ENSMUST00000028386 Krtap4-2B1AQ85 167 aa7,13□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Sprr2iO70560 76 aa7,13□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Fsip2A2ARZ3 6995 aa7,12□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Mt4P47945 62 aa7,11□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Lce1gQ9D195 139 aa7,11□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Lce1hQ9D6R3 140 aa7,11□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Lce3aQ497I5 98 aa7,09□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Lce1bQ9D149 137 aa7,09□□□□□ -1,27
Nckap1-201ENSMUST00000028386 Lce1fB9EJP6 147 aa7,07□□□□□ -1,28
Nckap1-201ENSMUST00000028386 Lce1cQ9D1C5 147 aa7,07□□□□□ -1,28
Nckap1-201ENSMUST00000028386 Lce1lQ9D1G7 135 aa7,07□□□□□ -1,28
Nckap1-201ENSMUST00000028386 Lce1dQ9D731 133 aa7,07□□□□□ -1,28
Nckap1-201ENSMUST00000028386 Krtap9-3Q3V2C1 136 aa6,89□□□□□ -1,31
Nckap1-201ENSMUST00000028386 Lce1eQ9D139 143 aa6,88□□□□□ -1,31
Retrieved 100 of 22,080 RNA–protein pairs in 45,1 ms