RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Kiaa1109A2AAE1 5005 aa12,16□□□□□ -0,46
Cldnd1-201ENSMUST00000023426 Gm12216A0A1W2P827 62 aa12,16□□□□□ -0,46
Cldnd1-201ENSMUST00000023426 Herc2Q4U2R1 4836 aa12,15□□□□□ -0,46
Cldnd1-201ENSMUST00000023426 Romo1P60603 79 aa12,11□□□□□ -0,47
Cldnd1-201ENSMUST00000023426 Birc6O88738 4882 aa12,1□□□□□ -0,47
Cldnd1-201ENSMUST00000023426 Sec61bQ9CQS8 96 aaKnown RBP12,08□□□□□ -0,47
Cldnd1-201ENSMUST00000023426 Krtap13-1Q8K198 168 aa12,07□□□□□ -0,48
Cldnd1-201ENSMUST00000023426 BC029722A0A0N4SW31 51 aa12,04□□□□□ -0,48
Cldnd1-201ENSMUST00000023426 2310057N15RikQ9D6T8 200 aa11,91□□□□□ -0,5
Cldnd1-201ENSMUST00000023426 HydinQ80W93 5154 aa11,89□□□□□ -0,51
Cldnd1-201ENSMUST00000023426 CriptO70333 101 aa11,88□□□□□ -0,51
Cldnd1-201ENSMUST00000023426 B930094E09RikQ8C4T2 136 aa11,87□□□□□ -0,51
Cldnd1-201ENSMUST00000023426 Krtap1-5A2A590 122 aa11,87□□□□□ -0,51
Cldnd1-201ENSMUST00000023426 Lrp2A2ARV4 4660 aa11,82□□□□□ -0,52
Cldnd1-201ENSMUST00000023426 Gm17402F6Z0L5 76 aa11,81□□□□□ -0,52
Cldnd1-201ENSMUST00000023426 Gm19426M0QWC7 77 aa11,78□□□□□ -0,52
Cldnd1-201ENSMUST00000023426 Fam229aB2KGE5 128 aa11,68□□□□□ -0,54
Cldnd1-201ENSMUST00000023426 Gm21887J3QQ04 176 aa11,65□□□□□ -0,54
Cldnd1-201ENSMUST00000023426 Krtap16-3Q8C1I6 86 aa11,55□□□□□ -0,56
Cldnd1-201ENSMUST00000023426 Krtap19-1Q925H2 87 aa11,42□□□□□ -0,58
Cldnd1-201ENSMUST00000023426 Sprr2a3Q4KL71 83 aa11,4□□□□□ -0,58
Cldnd1-201ENSMUST00000023426 Sprr2a1Q9CQK8 83 aa11,4□□□□□ -0,58
Cldnd1-201ENSMUST00000023426 PcloQ9QYX7 5068 aa11,36□□□□□ -0,59
Cldnd1-201ENSMUST00000023426 Gm19402J3QJV4 266 aa11,33□□□□□ -0,6
Cldnd1-201ENSMUST00000023426 Spink7Q6IE32 76 aa11,32□□□□□ -0,6
Cldnd1-201ENSMUST00000023426 Krtap19-3Q925H6 87 aa11,32□□□□□ -0,6
Cldnd1-201ENSMUST00000023426 Crct1Q6PAI5 102 aa11,3□□□□□ -0,6
Cldnd1-201ENSMUST00000023426 Gm10318A0A1W2P728 225 aa11,26□□□□□ -0,61
Cldnd1-201ENSMUST00000023426 Mp68P56379 58 aa11,21□□□□□ -0,61
Cldnd1-201ENSMUST00000023426 Krtap7-1Q9D3I6 87 aa11,12□□□□□ -0,63
Cldnd1-201ENSMUST00000023426 Gm20538F6Z9R1 75 aa11,11□□□□□ -0,63
Cldnd1-201ENSMUST00000023426 Krtap1-4Q3V2D6 188 aa11,08□□□□□ -0,64
Cldnd1-201ENSMUST00000023426 Gm40193A0A1B0GT39 78 aa11,06□□□□□ -0,64
Cldnd1-201ENSMUST00000023426 Lce1mQ9CR91 182 aa11,06□□□□□ -0,64
Cldnd1-201ENSMUST00000023426 Herc1E9PZP8 4859 aa10,98□□□□□ -0,65
Cldnd1-201ENSMUST00000023426 Krtap1-3A2A588 173 aa10,84□□□□□ -0,67
Cldnd1-201ENSMUST00000023426 Camk2n1Q6QWF9 78 aa10,83□□□□□ -0,68
Cldnd1-201ENSMUST00000023426 Gm19668J3QMD1 248 aa10,72□□□□□ -0,69
Cldnd1-201ENSMUST00000023426 ZanO88799 5376 aa10,69□□□□□ -0,7
Cldnd1-201ENSMUST00000023426 4932415D10RikA0A1W2P6U8 4986 aa10,68□□□□□ -0,7
Cldnd1-201ENSMUST00000023426 Ush2AQ2QI47 5193 aa10,68□□□□□ -0,7
Cldnd1-201ENSMUST00000023426 Hmcn2A2AJ76 5100 aa10,65□□□□□ -0,7
Cldnd1-201ENSMUST00000023426 Gm9789Q8BIG3 52 aa10,6□□□□□ -0,71
Cldnd1-201ENSMUST00000023426 Krtap12-1Q9Z287 130 aa10,6□□□□□ -0,71
Cldnd1-201ENSMUST00000023426 Lce1jD3YUU5 139 aa10,59□□□□□ -0,71
Cldnd1-201ENSMUST00000023426 Krtap19-9aF8WH65 55 aa10,58□□□□□ -0,72
Cldnd1-201ENSMUST00000023426 LorP18165 486 aa10,53□□□□□ -0,72
Cldnd1-201ENSMUST00000023426 Ubr4A2AN08 5180 aa10,48□□□□□ -0,73
Cldnd1-201ENSMUST00000023426 Prm1P02319 51 aa10,45□□□□□ -0,74
Cldnd1-201ENSMUST00000023426 Ndufaf8A2AMZ4 74 aa10,44□□□□□ -0,74
Cldnd1-201ENSMUST00000023426 Gm18596A0A1W2P860 280 aa10,43□□□□□ -0,74
Cldnd1-201ENSMUST00000023426 Gm7735D3YX18 52 aa10,34□□□□□ -0,75
Cldnd1-201ENSMUST00000023426 Fat4Q2PZL6 4981 aa10,32□□□□□ -0,76
Cldnd1-201ENSMUST00000023426 Rnf213E9Q555 5152 aaKnown RBP10,3□□□□□ -0,76
Cldnd1-201ENSMUST00000023426 Prm2P07978 107 aa10,24□□□□□ -0,77
Cldnd1-201ENSMUST00000023426 Tnp1P10856 55 aa10,18□□□□□ -0,78
Cldnd1-201ENSMUST00000023426 Krtap8-1O08633 61 aa10,08□□□□□ -0,8
Cldnd1-201ENSMUST00000023426 Krtap19-2Q925I0 141 aa10,01□□□□□ -0,81
Cldnd1-201ENSMUST00000023426 Krtap17-1A2A5X6 109 aa10□□□□□ -0,81
Cldnd1-201ENSMUST00000023426 Lce1iQ9D6P5 149 aa9,96□□□□□ -0,82
Cldnd1-201ENSMUST00000023426 SspoQ8CG65 4998 aa9,94□□□□□ -0,82
Cldnd1-201ENSMUST00000023426 Krtap19-9bQ99NG9 58 aa9,93□□□□□ -0,82
Cldnd1-201ENSMUST00000023426 Krtap9-5A2A5X3 358 aa9,92□□□□□ -0,82
Cldnd1-201ENSMUST00000023426 Lce1a2Q9D1K4 149 aa9,86□□□□□ -0,83
Cldnd1-201ENSMUST00000023426 2310046K23RikA0A0A6YVW6 87 aa9,68□□□□□ -0,86
Cldnd1-201ENSMUST00000023426 A0A1Y7VJH8 109 aa9,59□□□□□ -0,87
Cldnd1-201ENSMUST00000023426 Gm10061D3Z714 54 aa9,55□□□□□ -0,88
Cldnd1-201ENSMUST00000023426 Krtap9-3Q3V2C1 136 aa9,4□□□□□ -0,9
Cldnd1-201ENSMUST00000023426 Gm6358A0A087WPH4 74 aa9,39□□□□□ -0,91
Cldnd1-201ENSMUST00000023426 Mt2P02798 61 aa9,35□□□□□ -0,91
Cldnd1-201ENSMUST00000023426 Lce1hQ9D6R3 140 aa9,34□□□□□ -0,91
Cldnd1-201ENSMUST00000023426 Muc5bE9Q5I3 4800 aa9,32□□□□□ -0,92
Cldnd1-201ENSMUST00000023426 Gm9112A2AI92 75 aa9,31□□□□□ -0,92
Cldnd1-201ENSMUST00000023426 Krtap28-10A0A1Y7VP58 119 aa9,19□□□□□ -0,94
Cldnd1-201ENSMUST00000023426 A0A1Y7VLE6 161 aa8,93□□□□□ -0,98
Cldnd1-201ENSMUST00000023426 Gm11569B1AQB1 180 aa8,86□□□□□ -0,99
Cldnd1-201ENSMUST00000023426 Krtap22-2J3QNX6 67 aa8,83□□□□□ -1
Cldnd1-201ENSMUST00000023426 Krtap28-13A0A087WQP5 138 aa8,8□□□□□ -1
Cldnd1-201ENSMUST00000023426 Sprr2gO70558 76 aa8,65□□□□□ -1,02
Cldnd1-201ENSMUST00000023426 Lce1dQ9D731 133 aa8,62□□□□□ -1,03
Cldnd1-201ENSMUST00000023426 Krtap4-1Q3UUY3 169 aa8,6□□□□□ -1,03
Cldnd1-201ENSMUST00000023426 Gm10272F7CZ33 110 aa8,53□□□□□ -1,04
Cldnd1-201ENSMUST00000023426 Sprr2dO70555 85 aa8,53□□□□□ -1,04
Cldnd1-201ENSMUST00000023426 A030005L19RikA0A1Y7VIU2 113 aa8,51□□□□□ -1,05
Cldnd1-201ENSMUST00000023426 A030005K14RikA0A1Y7VNY1 122 aa8,51□□□□□ -1,05
Cldnd1-201ENSMUST00000023426 4933428G20RikQ9D3X4 101 aa8,5□□□□□ -1,05
Cldnd1-201ENSMUST00000023426 Gm11938Q9D3H4 131 aa8,39□□□□□ -1,07
Cldnd1-201ENSMUST00000023426 Lce1eQ9D139 143 aa8,37□□□□□ -1,07
Cldnd1-201ENSMUST00000023426 Gm11562A0PK51 136 aa8,35□□□□□ -1,07
Cldnd1-201ENSMUST00000023426 Mdn1A2ANY6 5589 aaKnown RBP8,27□□□□□ -1,09
Cldnd1-201ENSMUST00000023426 Gm11555B1AQ89 175 aa8,17□□□□□ -1,1
Cldnd1-201ENSMUST00000023426 Gm7544A0A1Y7VJ58 118 aa8,12□□□□□ -1,11
Cldnd1-201ENSMUST00000023426 Krtap19-4Q925H7 84 aa8,05□□□□□ -1,12
Cldnd1-201ENSMUST00000023426 Krtap4-6Q3V4B7 195 aa8,01□□□□□ -1,13
Cldnd1-201ENSMUST00000023426 Lce1cQ9D1C5 147 aa8,01□□□□□ -1,13
Cldnd1-201ENSMUST00000023426 Gm11563B1AQ90 168 aa7,98□□□□□ -1,13
Cldnd1-201ENSMUST00000023426 Krtap4-7Q9D732 168 aa7,98□□□□□ -1,13
Cldnd1-201ENSMUST00000023426 Lce3bQ9CQM7 98 aa7,85□□□□□ -1,15
Cldnd1-201ENSMUST00000023426 Gm10100J3QK64 120 aa7,81□□□□□ -1,16
Cldnd1-201ENSMUST00000023426 Lce1gQ9D195 139 aa7,79□□□□□ -1,16
Retrieved 100 of 22,080 RNA–protein pairs in 10,4 ms