RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Kiaa1109A2AAE1 5005 aa12.16□□□□□ -0.46
Cldnd1-201ENSMUST00000023426 Gm12216A0A1W2P827 62 aa12.16□□□□□ -0.46
Cldnd1-201ENSMUST00000023426 Herc2Q4U2R1 4836 aa12.15□□□□□ -0.46
Cldnd1-201ENSMUST00000023426 Romo1P60603 79 aa12.11□□□□□ -0.47
Cldnd1-201ENSMUST00000023426 Birc6O88738 4882 aa12.1□□□□□ -0.47
Cldnd1-201ENSMUST00000023426 Sec61bQ9CQS8 96 aaKnown RBP12.08□□□□□ -0.47
Cldnd1-201ENSMUST00000023426 Krtap13-1Q8K198 168 aa12.07□□□□□ -0.48
Cldnd1-201ENSMUST00000023426 BC029722A0A0N4SW31 51 aa12.04□□□□□ -0.48
Cldnd1-201ENSMUST00000023426 2310057N15RikQ9D6T8 200 aa11.91□□□□□ -0.5
Cldnd1-201ENSMUST00000023426 HydinQ80W93 5154 aa11.89□□□□□ -0.51
Cldnd1-201ENSMUST00000023426 CriptO70333 101 aa11.88□□□□□ -0.51
Cldnd1-201ENSMUST00000023426 B930094E09RikQ8C4T2 136 aa11.87□□□□□ -0.51
Cldnd1-201ENSMUST00000023426 Krtap1-5A2A590 122 aa11.87□□□□□ -0.51
Cldnd1-201ENSMUST00000023426 Lrp2A2ARV4 4660 aa11.82□□□□□ -0.52
Cldnd1-201ENSMUST00000023426 Gm17402F6Z0L5 76 aa11.81□□□□□ -0.52
Cldnd1-201ENSMUST00000023426 Gm19426M0QWC7 77 aa11.78□□□□□ -0.52
Cldnd1-201ENSMUST00000023426 Fam229aB2KGE5 128 aa11.68□□□□□ -0.54
Cldnd1-201ENSMUST00000023426 Gm21887J3QQ04 176 aa11.65□□□□□ -0.54
Cldnd1-201ENSMUST00000023426 Krtap16-3Q8C1I6 86 aa11.55□□□□□ -0.56
Cldnd1-201ENSMUST00000023426 Krtap19-1Q925H2 87 aa11.42□□□□□ -0.58
Cldnd1-201ENSMUST00000023426 Sprr2a3Q4KL71 83 aa11.4□□□□□ -0.58
Cldnd1-201ENSMUST00000023426 Sprr2a1Q9CQK8 83 aa11.4□□□□□ -0.58
Cldnd1-201ENSMUST00000023426 PcloQ9QYX7 5068 aa11.36□□□□□ -0.59
Cldnd1-201ENSMUST00000023426 Gm19402J3QJV4 266 aa11.33□□□□□ -0.6
Cldnd1-201ENSMUST00000023426 Spink7Q6IE32 76 aa11.32□□□□□ -0.6
Cldnd1-201ENSMUST00000023426 Krtap19-3Q925H6 87 aa11.32□□□□□ -0.6
Cldnd1-201ENSMUST00000023426 Crct1Q6PAI5 102 aa11.3□□□□□ -0.6
Cldnd1-201ENSMUST00000023426 Gm10318A0A1W2P728 225 aa11.26□□□□□ -0.61
Cldnd1-201ENSMUST00000023426 Mp68P56379 58 aa11.21□□□□□ -0.61
Cldnd1-201ENSMUST00000023426 Krtap7-1Q9D3I6 87 aa11.12□□□□□ -0.63
Cldnd1-201ENSMUST00000023426 Gm20538F6Z9R1 75 aa11.11□□□□□ -0.63
Cldnd1-201ENSMUST00000023426 Krtap1-4Q3V2D6 188 aa11.08□□□□□ -0.64
Cldnd1-201ENSMUST00000023426 Gm40193A0A1B0GT39 78 aa11.06□□□□□ -0.64
Cldnd1-201ENSMUST00000023426 Lce1mQ9CR91 182 aa11.06□□□□□ -0.64
Cldnd1-201ENSMUST00000023426 Herc1E9PZP8 4859 aa10.98□□□□□ -0.65
Cldnd1-201ENSMUST00000023426 Krtap1-3A2A588 173 aa10.84□□□□□ -0.67
Cldnd1-201ENSMUST00000023426 Camk2n1Q6QWF9 78 aa10.83□□□□□ -0.68
Cldnd1-201ENSMUST00000023426 Gm19668J3QMD1 248 aa10.72□□□□□ -0.69
Cldnd1-201ENSMUST00000023426 ZanO88799 5376 aa10.69□□□□□ -0.7
Cldnd1-201ENSMUST00000023426 4932415D10RikA0A1W2P6U8 4986 aa10.68□□□□□ -0.7
Cldnd1-201ENSMUST00000023426 Ush2AQ2QI47 5193 aa10.68□□□□□ -0.7
Cldnd1-201ENSMUST00000023426 Hmcn2A2AJ76 5100 aa10.65□□□□□ -0.7
Cldnd1-201ENSMUST00000023426 Gm9789Q8BIG3 52 aa10.6□□□□□ -0.71
Cldnd1-201ENSMUST00000023426 Krtap12-1Q9Z287 130 aa10.6□□□□□ -0.71
Cldnd1-201ENSMUST00000023426 Lce1jD3YUU5 139 aa10.59□□□□□ -0.71
Cldnd1-201ENSMUST00000023426 Krtap19-9aF8WH65 55 aa10.58□□□□□ -0.72
Cldnd1-201ENSMUST00000023426 LorP18165 486 aa10.53□□□□□ -0.72
Cldnd1-201ENSMUST00000023426 Ubr4A2AN08 5180 aa10.48□□□□□ -0.73
Cldnd1-201ENSMUST00000023426 Prm1P02319 51 aa10.45□□□□□ -0.74
Cldnd1-201ENSMUST00000023426 Ndufaf8A2AMZ4 74 aa10.44□□□□□ -0.74
Cldnd1-201ENSMUST00000023426 Gm18596A0A1W2P860 280 aa10.43□□□□□ -0.74
Cldnd1-201ENSMUST00000023426 Gm7735D3YX18 52 aa10.34□□□□□ -0.75
Cldnd1-201ENSMUST00000023426 Fat4Q2PZL6 4981 aa10.32□□□□□ -0.76
Cldnd1-201ENSMUST00000023426 Rnf213E9Q555 5152 aaKnown RBP10.3□□□□□ -0.76
Cldnd1-201ENSMUST00000023426 Prm2P07978 107 aa10.24□□□□□ -0.77
Cldnd1-201ENSMUST00000023426 Tnp1P10856 55 aa10.18□□□□□ -0.78
Cldnd1-201ENSMUST00000023426 Krtap8-1O08633 61 aa10.08□□□□□ -0.8
Cldnd1-201ENSMUST00000023426 Krtap19-2Q925I0 141 aa10.01□□□□□ -0.81
Cldnd1-201ENSMUST00000023426 Krtap17-1A2A5X6 109 aa10□□□□□ -0.81
Cldnd1-201ENSMUST00000023426 Lce1iQ9D6P5 149 aa9.96□□□□□ -0.82
Cldnd1-201ENSMUST00000023426 SspoQ8CG65 4998 aa9.94□□□□□ -0.82
Cldnd1-201ENSMUST00000023426 Krtap19-9bQ99NG9 58 aa9.93□□□□□ -0.82
Cldnd1-201ENSMUST00000023426 Krtap9-5A2A5X3 358 aa9.92□□□□□ -0.82
Cldnd1-201ENSMUST00000023426 Lce1a2Q9D1K4 149 aa9.86□□□□□ -0.83
Cldnd1-201ENSMUST00000023426 2310046K23RikA0A0A6YVW6 87 aa9.68□□□□□ -0.86
Cldnd1-201ENSMUST00000023426 A0A1Y7VJH8 109 aa9.59□□□□□ -0.87
Cldnd1-201ENSMUST00000023426 Gm10061D3Z714 54 aa9.55□□□□□ -0.88
Cldnd1-201ENSMUST00000023426 Krtap9-3Q3V2C1 136 aa9.4□□□□□ -0.9
Cldnd1-201ENSMUST00000023426 Gm6358A0A087WPH4 74 aa9.39□□□□□ -0.91
Cldnd1-201ENSMUST00000023426 Mt2P02798 61 aa9.35□□□□□ -0.91
Cldnd1-201ENSMUST00000023426 Lce1hQ9D6R3 140 aa9.34□□□□□ -0.91
Cldnd1-201ENSMUST00000023426 Muc5bE9Q5I3 4800 aa9.32□□□□□ -0.92
Cldnd1-201ENSMUST00000023426 Gm9112A2AI92 75 aa9.31□□□□□ -0.92
Cldnd1-201ENSMUST00000023426 Krtap28-10A0A1Y7VP58 119 aa9.19□□□□□ -0.94
Cldnd1-201ENSMUST00000023426 A0A1Y7VLE6 161 aa8.93□□□□□ -0.98
Cldnd1-201ENSMUST00000023426 Gm11569B1AQB1 180 aa8.86□□□□□ -0.99
Cldnd1-201ENSMUST00000023426 Krtap22-2J3QNX6 67 aa8.83□□□□□ -1
Cldnd1-201ENSMUST00000023426 Krtap28-13A0A087WQP5 138 aa8.8□□□□□ -1
Cldnd1-201ENSMUST00000023426 Sprr2gO70558 76 aa8.65□□□□□ -1.02
Cldnd1-201ENSMUST00000023426 Lce1dQ9D731 133 aa8.62□□□□□ -1.03
Cldnd1-201ENSMUST00000023426 Krtap4-1Q3UUY3 169 aa8.6□□□□□ -1.03
Cldnd1-201ENSMUST00000023426 Gm10272F7CZ33 110 aa8.53□□□□□ -1.04
Cldnd1-201ENSMUST00000023426 Sprr2dO70555 85 aa8.53□□□□□ -1.04
Cldnd1-201ENSMUST00000023426 A030005L19RikA0A1Y7VIU2 113 aa8.51□□□□□ -1.05
Cldnd1-201ENSMUST00000023426 A030005K14RikA0A1Y7VNY1 122 aa8.51□□□□□ -1.05
Cldnd1-201ENSMUST00000023426 4933428G20RikQ9D3X4 101 aa8.5□□□□□ -1.05
Cldnd1-201ENSMUST00000023426 Gm11938Q9D3H4 131 aa8.39□□□□□ -1.07
Cldnd1-201ENSMUST00000023426 Lce1eQ9D139 143 aa8.37□□□□□ -1.07
Cldnd1-201ENSMUST00000023426 Gm11562A0PK51 136 aa8.35□□□□□ -1.07
Cldnd1-201ENSMUST00000023426 Mdn1A2ANY6 5589 aaKnown RBP8.27□□□□□ -1.09
Cldnd1-201ENSMUST00000023426 Gm11555B1AQ89 175 aa8.17□□□□□ -1.1
Cldnd1-201ENSMUST00000023426 Gm7544A0A1Y7VJ58 118 aa8.12□□□□□ -1.11
Cldnd1-201ENSMUST00000023426 Krtap19-4Q925H7 84 aa8.05□□□□□ -1.12
Cldnd1-201ENSMUST00000023426 Krtap4-6Q3V4B7 195 aa8.01□□□□□ -1.13
Cldnd1-201ENSMUST00000023426 Lce1cQ9D1C5 147 aa8.01□□□□□ -1.13
Cldnd1-201ENSMUST00000023426 Gm11563B1AQ90 168 aa7.98□□□□□ -1.13
Cldnd1-201ENSMUST00000023426 Krtap4-7Q9D732 168 aa7.98□□□□□ -1.13
Cldnd1-201ENSMUST00000023426 Lce3bQ9CQM7 98 aa7.85□□□□□ -1.15
Cldnd1-201ENSMUST00000023426 Gm10100J3QK64 120 aa7.81□□□□□ -1.16
Cldnd1-201ENSMUST00000023426 Lce1gQ9D195 139 aa7.79□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 99.7 ms