RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Fam229aB2KGE5 128 aa6.03□□□□□ -1.44
Trim23-201ENSMUST00000022225 Gm9112A2AI92 75 aa6.01□□□□□ -1.45
Trim23-201ENSMUST00000022225 Krtap15-1Q9QZU5 150 aa6.01□□□□□ -1.45
Trim23-201ENSMUST00000022225 2210017I01RikA0A0A6YVV1 95 aa5.98□□□□□ -1.45
Trim23-201ENSMUST00000022225 Defb11Q8R2I7 77 aa5.98□□□□□ -1.45
Trim23-201ENSMUST00000022225 Mycbp2Q7TPH6 4711 aa5.92□□□□□ -1.46
Trim23-201ENSMUST00000022225 2310057N15RikQ9D6T8 200 aa5.9□□□□□ -1.46
Trim23-201ENSMUST00000022225 Gm9736A0A1W2P7N1 277 aa5.89□□□□□ -1.47
Trim23-201ENSMUST00000022225 Gm17402F6Z0L5 76 aa5.88□□□□□ -1.47
Trim23-201ENSMUST00000022225 BC029722A0A0N4SW31 51 aa5.86□□□□□ -1.47
Trim23-201ENSMUST00000022225 Gm19402J3QJV4 266 aa5.86□□□□□ -1.47
Trim23-201ENSMUST00000022225 Dnah8Q91XQ0 4731 aa5.77□□□□□ -1.49
Trim23-201ENSMUST00000022225 Krtap19-5O08632 62 aa5.75□□□□□ -1.49
Trim23-201ENSMUST00000022225 Krtap13-1Q8K198 168 aa5.73□□□□□ -1.49
Trim23-201ENSMUST00000022225 Ryr3A2AGL3 4863 aa5.71□□□□□ -1.5
Trim23-201ENSMUST00000022225 Kmt2cQ8BRH4 4903 aa5.69□□□□□ -1.5
Trim23-201ENSMUST00000022225 Sprr2a3Q4KL71 83 aa5.68□□□□□ -1.5
Trim23-201ENSMUST00000022225 Sprr2a1Q9CQK8 83 aa5.68□□□□□ -1.5
Trim23-201ENSMUST00000022225 Ryr1E9PZQ0 5035 aa5.64□□□□□ -1.51
Trim23-201ENSMUST00000022225 Krtap1-5A2A590 122 aa5.57□□□□□ -1.52
Trim23-201ENSMUST00000022225 Abca13Q5SSE9 5034 aa5.54□□□□□ -1.52
Trim23-201ENSMUST00000022225 Spink7Q6IE32 76 aa5.47□□□□□ -1.53
Trim23-201ENSMUST00000022225 Ryr2E9Q401 4966 aaKnown RBP5.47□□□□□ -1.53
Trim23-201ENSMUST00000022225 Camk2n1Q6QWF9 78 aa5.45□□□□□ -1.54
Trim23-201ENSMUST00000022225 Sec61bQ9CQS8 96 aaKnown RBP5.4□□□□□ -1.54
Trim23-201ENSMUST00000022225 Lrp2A2ARV4 4660 aa5.39□□□□□ -1.55
Trim23-201ENSMUST00000022225 Tnp1P10856 55 aa5.32□□□□□ -1.56
Trim23-201ENSMUST00000022225 Dnhd1D3Z2X2 4750 aa5.21□□□□□ -1.57
Trim23-201ENSMUST00000022225 Krtap16-3Q8C1I6 86 aa5.21□□□□□ -1.58
Trim23-201ENSMUST00000022225 Gm10318A0A1W2P728 225 aa5.2□□□□□ -1.58
Trim23-201ENSMUST00000022225 Birc6O88738 4882 aa5.17□□□□□ -1.58
Trim23-201ENSMUST00000022225 Krtap1-4Q3V2D6 188 aa5.16□□□□□ -1.58
Trim23-201ENSMUST00000022225 Crct1Q6PAI5 102 aa5.11□□□□□ -1.59
Trim23-201ENSMUST00000022225 Gm18596A0A1W2P860 280 aa5.1□□□□□ -1.59
Trim23-201ENSMUST00000022225 Kiaa1109A2AAE1 5005 aa5.1□□□□□ -1.59
Trim23-201ENSMUST00000022225 2310046K23RikA0A0A6YVW6 87 aa5.1□□□□□ -1.59
Trim23-201ENSMUST00000022225 Krtap19-1Q925H2 87 aa5.1□□□□□ -1.59
Trim23-201ENSMUST00000022225 HydinQ80W93 5154 aa5.08□□□□□ -1.6
Trim23-201ENSMUST00000022225 Herc1E9PZP8 4859 aa5.07□□□□□ -1.6
Trim23-201ENSMUST00000022225 Lce1mQ9CR91 182 aa5.04□□□□□ -1.6
Trim23-201ENSMUST00000022225 Krtap19-3Q925H6 87 aa5.03□□□□□ -1.6
Trim23-201ENSMUST00000022225 PcloQ9QYX7 5068 aa5.02□□□□□ -1.61
Trim23-201ENSMUST00000022225 Herc2Q4U2R1 4836 aa5.02□□□□□ -1.61
Trim23-201ENSMUST00000022225 Krtap17-1A2A5X6 109 aa4.94□□□□□ -1.62
Trim23-201ENSMUST00000022225 Lce1jD3YUU5 139 aa4.93□□□□□ -1.62
Trim23-201ENSMUST00000022225 Hmcn2A2AJ76 5100 aa4.92□□□□□ -1.62
Trim23-201ENSMUST00000022225 Krtap8-1O08633 61 aa4.9□□□□□ -1.63
Trim23-201ENSMUST00000022225 Krtap19-9aF8WH65 55 aa4.84□□□□□ -1.63
Trim23-201ENSMUST00000022225 Krtap12-1Q9Z287 130 aa4.82□□□□□ -1.64
Trim23-201ENSMUST00000022225 Ubr4A2AN08 5180 aa4.79□□□□□ -1.64
Trim23-201ENSMUST00000022225 4932415D10RikA0A1W2P6U8 4986 aa4.78□□□□□ -1.64
Trim23-201ENSMUST00000022225 Krtap19-9bQ99NG9 58 aa4.76□□□□□ -1.65
Trim23-201ENSMUST00000022225 Krtap9-3Q3V2C1 136 aa4.76□□□□□ -1.65
Trim23-201ENSMUST00000022225 ZanO88799 5376 aa4.75□□□□□ -1.65
Trim23-201ENSMUST00000022225 Fat4Q2PZL6 4981 aa4.72□□□□□ -1.65
Trim23-201ENSMUST00000022225 Lce1hQ9D6R3 140 aa4.69□□□□□ -1.66
Trim23-201ENSMUST00000022225 Lce1dQ9D731 133 aa4.69□□□□□ -1.66
Trim23-201ENSMUST00000022225 Lce1iQ9D6P5 149 aa4.62□□□□□ -1.67
Trim23-201ENSMUST00000022225 Lce1a2Q9D1K4 149 aa4.62□□□□□ -1.67
Trim23-201ENSMUST00000022225 Gm7735D3YX18 52 aa4.56□□□□□ -1.68
Trim23-201ENSMUST00000022225 Prm1P02319 51 aa4.55□□□□□ -1.68
Trim23-201ENSMUST00000022225 Sprr2gO70558 76 aa4.53□□□□□ -1.68
Trim23-201ENSMUST00000022225 Krtap1-3A2A588 173 aa4.53□□□□□ -1.68
Trim23-201ENSMUST00000022225 4933428G20RikQ9D3X4 101 aa4.53□□□□□ -1.68
Trim23-201ENSMUST00000022225 Ush2AQ2QI47 5193 aa4.52□□□□□ -1.69
Trim23-201ENSMUST00000022225 Rnf213E9Q555 5152 aaKnown RBP4.52□□□□□ -1.69
Trim23-201ENSMUST00000022225 Lce1eQ9D139 143 aa4.51□□□□□ -1.69
Trim23-201ENSMUST00000022225 Gm11938Q9D3H4 131 aa4.49□□□□□ -1.69
Trim23-201ENSMUST00000022225 LorP18165 486 aa4.44□□□□□ -1.7
Trim23-201ENSMUST00000022225 Gm9789Q8BIG3 52 aa4.42□□□□□ -1.7
Trim23-201ENSMUST00000022225 Sprr2dO70555 85 aa4.4□□□□□ -1.71
Trim23-201ENSMUST00000022225 Krtap19-2Q925I0 141 aa4.39□□□□□ -1.71
Trim23-201ENSMUST00000022225 Krtap9-5A2A5X3 358 aa4.34□□□□□ -1.72
Trim23-201ENSMUST00000022225 Gm11562A0PK51 136 aa4.3□□□□□ -1.72
Trim23-201ENSMUST00000022225 Krtap31-1Q9D644 177 aa4.26□□□□□ -1.73
Trim23-201ENSMUST00000022225 Muc5bE9Q5I3 4800 aa4.24□□□□□ -1.73
Trim23-201ENSMUST00000022225 Krtap4-2B1AQ85 167 aa4.24□□□□□ -1.73
Trim23-201ENSMUST00000022225 SspoQ8CG65 4998 aa4.23□□□□□ -1.73
Trim23-201ENSMUST00000022225 Sprr2iO70560 76 aa4.18□□□□□ -1.74
Trim23-201ENSMUST00000022225 Lce1cQ9D1C5 147 aa4.18□□□□□ -1.74
Trim23-201ENSMUST00000022225 Mt2P02798 61 aa4.18□□□□□ -1.74
Trim23-201ENSMUST00000022225 Gm10272F7CZ33 110 aa4.11□□□□□ -1.75
Trim23-201ENSMUST00000022225 Syne2Q6ZWQ0 6874 aaKnown RBP4.09□□□□□ -1.75
Trim23-201ENSMUST00000022225 Lce1gQ9D195 139 aa4.07□□□□□ -1.76
Trim23-201ENSMUST00000022225 Gm6358A0A087WPH4 74 aa4.06□□□□□ -1.76
Trim23-201ENSMUST00000022225 Gm10100J3QK64 120 aa4.06□□□□□ -1.76
Trim23-201ENSMUST00000022225 Lce1fB9EJP6 147 aa4.04□□□□□ -1.76
Trim23-201ENSMUST00000022225 Krtap22-2J3QNX6 67 aa4.04□□□□□ -1.76
Trim23-201ENSMUST00000022225 Lce1a1Q9CQH5 143 aa4.04□□□□□ -1.76
Trim23-201ENSMUST00000022225 Gm11569B1AQB1 180 aa4.03□□□□□ -1.76
Trim23-201ENSMUST00000022225 Krtap4-1Q3UUY3 169 aa4.01□□□□□ -1.77
Trim23-201ENSMUST00000022225 Gm10142J3KMP7 120 aa4□□□□□ -1.77
Trim23-201ENSMUST00000022225 Krtap19-4Q925H7 84 aa3.99□□□□□ -1.77
Trim23-201ENSMUST00000022225 Gm10061D3Z714 54 aa3.96□□□□□ -1.78
Trim23-201ENSMUST00000022225 Lce3bQ9CQM7 98 aa3.96□□□□□ -1.78
Trim23-201ENSMUST00000022225 Sprr2fO70557 76 aa3.95□□□□□ -1.78
Trim23-201ENSMUST00000022225 Sprr2eO70556 76 aa3.91□□□□□ -1.78
Trim23-201ENSMUST00000022225 Gm11596B1AQB0 205 aa3.89□□□□□ -1.79
Trim23-201ENSMUST00000022225 Mdn1A2ANY6 5589 aaKnown RBP3.89□□□□□ -1.79
Trim23-201ENSMUST00000022225 Sprr2hO70559 108 aa3.89□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms