RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Krtap7-1Q9D3I6 87 aa8.75□□□□□ -1.01
Sqstm1-201ENSMUST00000015981 Gm9736A0A1W2P7N1 277 aa8.74□□□□□ -1.01
Sqstm1-201ENSMUST00000015981 2210017I01RikA0A0A6YVV1 95 aa8.7□□□□□ -1.02
Sqstm1-201ENSMUST00000015981 Ryr2E9Q401 4966 aaKnown RBP8.7□□□□□ -1.02
Sqstm1-201ENSMUST00000015981 Mycbp2Q7TPH6 4711 aa8.66□□□□□ -1.02
Sqstm1-201ENSMUST00000015981 Krtap19-5O08632 62 aa8.59□□□□□ -1.03
Sqstm1-201ENSMUST00000015981 Kmt2cQ8BRH4 4903 aa8.55□□□□□ -1.04
Sqstm1-201ENSMUST00000015981 BC029722A0A0N4SW31 51 aa8.55□□□□□ -1.04
Sqstm1-201ENSMUST00000015981 Fam229aB2KGE5 128 aa8.53□□□□□ -1.04
Sqstm1-201ENSMUST00000015981 Gm40193A0A1B0GT39 78 aa8.52□□□□□ -1.05
Sqstm1-201ENSMUST00000015981 Ryr1E9PZQ0 5035 aa8.47□□□□□ -1.05
Sqstm1-201ENSMUST00000015981 Gm19668J3QMD1 248 aa8.45□□□□□ -1.06
Sqstm1-201ENSMUST00000015981 Gm17402F6Z0L5 76 aa8.44□□□□□ -1.06
Sqstm1-201ENSMUST00000015981 Dnah8Q91XQ0 4731 aa8.43□□□□□ -1.06
Sqstm1-201ENSMUST00000015981 Abca13Q5SSE9 5034 aa8.38□□□□□ -1.07
Sqstm1-201ENSMUST00000015981 Gm19402J3QJV4 266 aa8.38□□□□□ -1.07
Sqstm1-201ENSMUST00000015981 Krtap13-1Q8K198 168 aa8.37□□□□□ -1.07
Sqstm1-201ENSMUST00000015981 2310057N15RikQ9D6T8 200 aa8.3□□□□□ -1.08
Sqstm1-201ENSMUST00000015981 Gm9112A2AI92 75 aa8.26□□□□□ -1.09
Sqstm1-201ENSMUST00000015981 Sprr2a3Q4KL71 83 aa8.17□□□□□ -1.1
Sqstm1-201ENSMUST00000015981 Sprr2a1Q9CQK8 83 aa8.17□□□□□ -1.1
Sqstm1-201ENSMUST00000015981 Herc2Q4U2R1 4836 aa8.14□□□□□ -1.11
Sqstm1-201ENSMUST00000015981 Krtap1-5A2A590 122 aa8.12□□□□□ -1.11
Sqstm1-201ENSMUST00000015981 Kiaa1109A2AAE1 5005 aa8.11□□□□□ -1.11
Sqstm1-201ENSMUST00000015981 HydinQ80W93 5154 aa8.08□□□□□ -1.12
Sqstm1-201ENSMUST00000015981 Spink7Q6IE32 76 aa8.06□□□□□ -1.12
Sqstm1-201ENSMUST00000015981 Birc6O88738 4882 aa8.02□□□□□ -1.13
Sqstm1-201ENSMUST00000015981 Dnhd1D3Z2X2 4750 aa7.98□□□□□ -1.13
Sqstm1-201ENSMUST00000015981 Lrp2A2ARV4 4660 aa7.94□□□□□ -1.14
Sqstm1-201ENSMUST00000015981 Camk2n1Q6QWF9 78 aa7.91□□□□□ -1.14
Sqstm1-201ENSMUST00000015981 Sec61bQ9CQS8 96 aaKnown RBP7.89□□□□□ -1.15
Sqstm1-201ENSMUST00000015981 PcloQ9QYX7 5068 aa7.88□□□□□ -1.15
Sqstm1-201ENSMUST00000015981 Gm10318A0A1W2P728 225 aa7.74□□□□□ -1.17
Sqstm1-201ENSMUST00000015981 Krtap16-3Q8C1I6 86 aa7.69□□□□□ -1.18
Sqstm1-201ENSMUST00000015981 Crct1Q6PAI5 102 aa7.64□□□□□ -1.19
Sqstm1-201ENSMUST00000015981 Tnp1P10856 55 aa7.6□□□□□ -1.19
Sqstm1-201ENSMUST00000015981 Krtap1-4Q3V2D6 188 aa7.56□□□□□ -1.2
Sqstm1-201ENSMUST00000015981 Herc1E9PZP8 4859 aa7.56□□□□□ -1.2
Sqstm1-201ENSMUST00000015981 Krtap19-1Q925H2 87 aa7.53□□□□□ -1.2
Sqstm1-201ENSMUST00000015981 Krtap19-3Q925H6 87 aa7.45□□□□□ -1.22
Sqstm1-201ENSMUST00000015981 Lce1mQ9CR91 182 aa7.31□□□□□ -1.24
Sqstm1-201ENSMUST00000015981 Ush2AQ2QI47 5193 aa7.23□□□□□ -1.25
Sqstm1-201ENSMUST00000015981 Lce1jD3YUU5 139 aa7.23□□□□□ -1.25
Sqstm1-201ENSMUST00000015981 2310046K23RikA0A0A6YVW6 87 aa7.22□□□□□ -1.25
Sqstm1-201ENSMUST00000015981 Ubr4A2AN08 5180 aa7.19□□□□□ -1.26
Sqstm1-201ENSMUST00000015981 Hmcn2A2AJ76 5100 aa7.18□□□□□ -1.26
Sqstm1-201ENSMUST00000015981 Krtap19-9aF8WH65 55 aa7.14□□□□□ -1.27
Sqstm1-201ENSMUST00000015981 ZanO88799 5376 aa7.12□□□□□ -1.27
Sqstm1-201ENSMUST00000015981 4932415D10RikA0A1W2P6U8 4986 aa7.12□□□□□ -1.27
Sqstm1-201ENSMUST00000015981 Krtap12-1Q9Z287 130 aa7.11□□□□□ -1.27
Sqstm1-201ENSMUST00000015981 Krtap8-1O08633 61 aa7.08□□□□□ -1.28
Sqstm1-201ENSMUST00000015981 Fat4Q2PZL6 4981 aa7.07□□□□□ -1.28
Sqstm1-201ENSMUST00000015981 Gm18596A0A1W2P860 280 aa7.01□□□□□ -1.29
Sqstm1-201ENSMUST00000015981 A0A1Y7VJH8 109 aa7.01□□□□□ -1.29
Sqstm1-201ENSMUST00000015981 Krtap1-3A2A588 173 aa6.94□□□□□ -1.3
Sqstm1-201ENSMUST00000015981 Krtap19-9bQ99NG9 58 aa6.93□□□□□ -1.3
Sqstm1-201ENSMUST00000015981 Gm9789Q8BIG3 52 aa6.88□□□□□ -1.31
Sqstm1-201ENSMUST00000015981 Krtap9-3Q3V2C1 136 aa6.83□□□□□ -1.32
Sqstm1-201ENSMUST00000015981 LorP18165 486 aa6.8□□□□□ -1.32
Sqstm1-201ENSMUST00000015981 Krtap17-1A2A5X6 109 aa6.78□□□□□ -1.32
Sqstm1-201ENSMUST00000015981 Gm7735D3YX18 52 aa6.78□□□□□ -1.32
Sqstm1-201ENSMUST00000015981 Prm1P02319 51 aa6.78□□□□□ -1.32
Sqstm1-201ENSMUST00000015981 Krtap28-10A0A1Y7VP58 119 aa6.77□□□□□ -1.33
Sqstm1-201ENSMUST00000015981 Lce1iQ9D6P5 149 aa6.77□□□□□ -1.33
Sqstm1-201ENSMUST00000015981 Rnf213E9Q555 5152 aaKnown RBP6.76□□□□□ -1.33
Sqstm1-201ENSMUST00000015981 Lce1a2Q9D1K4 149 aa6.74□□□□□ -1.33
Sqstm1-201ENSMUST00000015981 Lce1hQ9D6R3 140 aa6.74□□□□□ -1.33
Sqstm1-201ENSMUST00000015981 Lce1dQ9D731 133 aa6.62□□□□□ -1.35
Sqstm1-201ENSMUST00000015981 Krtap19-2Q925I0 141 aa6.54□□□□□ -1.36
Sqstm1-201ENSMUST00000015981 Krtap9-5A2A5X3 358 aa6.48□□□□□ -1.37
Sqstm1-201ENSMUST00000015981 SspoQ8CG65 4998 aa6.46□□□□□ -1.38
Sqstm1-201ENSMUST00000015981 4933428G20RikQ9D3X4 101 aa6.45□□□□□ -1.38
Sqstm1-201ENSMUST00000015981 A0A1Y7VLE6 161 aa6.43□□□□□ -1.38
Sqstm1-201ENSMUST00000015981 Sprr2gO70558 76 aa6.43□□□□□ -1.38
Sqstm1-201ENSMUST00000015981 A030005L19RikA0A1Y7VIU2 113 aa6.42□□□□□ -1.38
Sqstm1-201ENSMUST00000015981 Lce1eQ9D139 143 aa6.36□□□□□ -1.39
Sqstm1-201ENSMUST00000015981 Gm11938Q9D3H4 131 aa6.34□□□□□ -1.39
Sqstm1-201ENSMUST00000015981 Gm7544A0A1Y7VJ58 118 aa6.32□□□□□ -1.4
Sqstm1-201ENSMUST00000015981 Krtap28-13A0A087WQP5 138 aa6.28□□□□□ -1.4
Sqstm1-201ENSMUST00000015981 Sprr2dO70555 85 aa6.24□□□□□ -1.41
Sqstm1-201ENSMUST00000015981 A030005K14RikA0A1Y7VNY1 122 aa6.22□□□□□ -1.41
Sqstm1-201ENSMUST00000015981 Mt2P02798 61 aa6.21□□□□□ -1.42
Sqstm1-201ENSMUST00000015981 Gm10061D3Z714 54 aa6.2□□□□□ -1.42
Sqstm1-201ENSMUST00000015981 Muc5bE9Q5I3 4800 aa6.09□□□□□ -1.43
Sqstm1-201ENSMUST00000015981 Gm6358A0A087WPH4 74 aa6.07□□□□□ -1.44
Sqstm1-201ENSMUST00000015981 Gm10272F7CZ33 110 aa6.02□□□□□ -1.45
Sqstm1-201ENSMUST00000015981 Lce1cQ9D1C5 147 aa5.96□□□□□ -1.45
Sqstm1-201ENSMUST00000015981 Gm11569B1AQB1 180 aa5.87□□□□□ -1.47
Sqstm1-201ENSMUST00000015981 Gm10100J3QK64 120 aa5.84□□□□□ -1.47
Sqstm1-201ENSMUST00000015981 Gm11562A0PK51 136 aa5.83□□□□□ -1.48
Sqstm1-201ENSMUST00000015981 Krtap22-2J3QNX6 67 aa5.81□□□□□ -1.48
Sqstm1-201ENSMUST00000015981 Sprr2iO70560 76 aa5.8□□□□□ -1.48
Sqstm1-201ENSMUST00000015981 Mdn1A2ANY6 5589 aaKnown RBP5.76□□□□□ -1.49
Sqstm1-201ENSMUST00000015981 Lce1fB9EJP6 147 aa5.76□□□□□ -1.49
Sqstm1-201ENSMUST00000015981 Lce1a1Q9CQH5 143 aa5.76□□□□□ -1.49
Sqstm1-201ENSMUST00000015981 Gm10142J3KMP7 120 aa5.74□□□□□ -1.49
Sqstm1-201ENSMUST00000015981 Krtap19-4Q925H7 84 aa5.73□□□□□ -1.49
Sqstm1-201ENSMUST00000015981 Lce3bQ9CQM7 98 aa5.73□□□□□ -1.49
Sqstm1-201ENSMUST00000015981 Lce3cQ91V05 98 aa5.55□□□□□ -1.52
Sqstm1-201ENSMUST00000015981 Lce3dE9Q8V1 98 aa5.53□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms