RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Abca13Q5SSE9 5034 aa5.14□□□□□ -1.59
Clip3-201ENSMUST00000014065 Kmt2cQ8BRH4 4903 aa5.13□□□□□ -1.59
Clip3-201ENSMUST00000014065 Ryr2E9Q401 4966 aaKnown RBP5.13□□□□□ -1.59
Clip3-201ENSMUST00000014065 2310057N15RikQ9D6T8 200 aa5.12□□□□□ -1.59
Clip3-201ENSMUST00000014065 Gm17416Q30KP4 66 aa5.08□□□□□ -1.6
Clip3-201ENSMUST00000014065 BC029722A0A0N4SW31 51 aa5.07□□□□□ -1.6
Clip3-201ENSMUST00000014065 B930094E09RikQ8C4T2 136 aa5.06□□□□□ -1.6
Clip3-201ENSMUST00000014065 Ndufaf8A2AMZ4 74 aa5.05□□□□□ -1.6
Clip3-201ENSMUST00000014065 2210017I01RikA0A0A6YVV1 95 aa5.04□□□□□ -1.6
Clip3-201ENSMUST00000014065 Ryr1E9PZQ0 5035 aa5.01□□□□□ -1.61
Clip3-201ENSMUST00000014065 Dnah8Q91XQ0 4731 aa4.99□□□□□ -1.61
Clip3-201ENSMUST00000014065 Spink7Q6IE32 76 aa4.98□□□□□ -1.61
Clip3-201ENSMUST00000014065 Gm10318A0A1W2P728 225 aa4.97□□□□□ -1.61
Clip3-201ENSMUST00000014065 Krtap13-1Q8K198 168 aa4.96□□□□□ -1.62
Clip3-201ENSMUST00000014065 HydinQ80W93 5154 aa4.94□□□□□ -1.62
Clip3-201ENSMUST00000014065 Lrp2A2ARV4 4660 aa4.9□□□□□ -1.62
Clip3-201ENSMUST00000014065 Kiaa1109A2AAE1 5005 aa4.9□□□□□ -1.62
Clip3-201ENSMUST00000014065 Gm19402J3QJV4 266 aa4.88□□□□□ -1.63
Clip3-201ENSMUST00000014065 Fam229aB2KGE5 128 aa4.87□□□□□ -1.63
Clip3-201ENSMUST00000014065 Crct1Q6PAI5 102 aa4.86□□□□□ -1.63
Clip3-201ENSMUST00000014065 Krtap7-1Q9D3I6 87 aa4.86□□□□□ -1.63
Clip3-201ENSMUST00000014065 Sec61bQ9CQS8 96 aaKnown RBP4.83□□□□□ -1.64
Clip3-201ENSMUST00000014065 Herc2Q4U2R1 4836 aa4.83□□□□□ -1.64
Clip3-201ENSMUST00000014065 Dnhd1D3Z2X2 4750 aa4.83□□□□□ -1.64
Clip3-201ENSMUST00000014065 Gm19668J3QMD1 248 aa4.82□□□□□ -1.64
Clip3-201ENSMUST00000014065 Camk2n1Q6QWF9 78 aa4.75□□□□□ -1.65
Clip3-201ENSMUST00000014065 Gm9112A2AI92 75 aa4.75□□□□□ -1.65
Clip3-201ENSMUST00000014065 Gm17402F6Z0L5 76 aa4.73□□□□□ -1.65
Clip3-201ENSMUST00000014065 PcloQ9QYX7 5068 aa4.72□□□□□ -1.65
Clip3-201ENSMUST00000014065 Birc6O88738 4882 aa4.7□□□□□ -1.66
Clip3-201ENSMUST00000014065 Gm40193A0A1B0GT39 78 aa4.7□□□□□ -1.66
Clip3-201ENSMUST00000014065 Krtap1-5A2A590 122 aa4.69□□□□□ -1.66
Clip3-201ENSMUST00000014065 Sprr2a3Q4KL71 83 aa4.66□□□□□ -1.66
Clip3-201ENSMUST00000014065 Sprr2a1Q9CQK8 83 aa4.66□□□□□ -1.66
Clip3-201ENSMUST00000014065 Krtap16-3Q8C1I6 86 aa4.57□□□□□ -1.68
Clip3-201ENSMUST00000014065 Ubr4A2AN08 5180 aa4.55□□□□□ -1.68
Clip3-201ENSMUST00000014065 Fat4Q2PZL6 4981 aa4.47□□□□□ -1.69
Clip3-201ENSMUST00000014065 Herc1E9PZP8 4859 aa4.46□□□□□ -1.7
Clip3-201ENSMUST00000014065 Krtap19-1Q925H2 87 aa4.46□□□□□ -1.7
Clip3-201ENSMUST00000014065 Krtap19-3Q925H6 87 aa4.46□□□□□ -1.7
Clip3-201ENSMUST00000014065 Krtap1-4Q3V2D6 188 aa4.45□□□□□ -1.7
Clip3-201ENSMUST00000014065 ZanO88799 5376 aa4.44□□□□□ -1.7
Clip3-201ENSMUST00000014065 Tnp1P10856 55 aa4.42□□□□□ -1.7
Clip3-201ENSMUST00000014065 4932415D10RikA0A1W2P6U8 4986 aa4.34□□□□□ -1.71
Clip3-201ENSMUST00000014065 Lce1jD3YUU5 139 aa4.33□□□□□ -1.72
Clip3-201ENSMUST00000014065 LorP18165 486 aa4.29□□□□□ -1.72
Clip3-201ENSMUST00000014065 Krtap12-1Q9Z287 130 aa4.25□□□□□ -1.73
Clip3-201ENSMUST00000014065 Rnf213E9Q555 5152 aaKnown RBP4.25□□□□□ -1.73
Clip3-201ENSMUST00000014065 Hmcn2A2AJ76 5100 aa4.24□□□□□ -1.73
Clip3-201ENSMUST00000014065 Krtap19-9aF8WH65 55 aa4.24□□□□□ -1.73
Clip3-201ENSMUST00000014065 Ush2AQ2QI47 5193 aa4.22□□□□□ -1.73
Clip3-201ENSMUST00000014065 Lce1mQ9CR91 182 aa4.18□□□□□ -1.74
Clip3-201ENSMUST00000014065 Krtap1-3A2A588 173 aa4.17□□□□□ -1.74
Clip3-201ENSMUST00000014065 Krtap17-1A2A5X6 109 aa4.17□□□□□ -1.74
Clip3-201ENSMUST00000014065 Gm18596A0A1W2P860 280 aa4.16□□□□□ -1.74
Clip3-201ENSMUST00000014065 Krtap8-1O08633 61 aa4.05□□□□□ -1.76
Clip3-201ENSMUST00000014065 Krtap19-9bQ99NG9 58 aa4.04□□□□□ -1.76
Clip3-201ENSMUST00000014065 Gm9789Q8BIG3 52 aa4.02□□□□□ -1.77
Clip3-201ENSMUST00000014065 Lce1iQ9D6P5 149 aa4.01□□□□□ -1.77
Clip3-201ENSMUST00000014065 Krtap9-3Q3V2C1 136 aa4.01□□□□□ -1.77
Clip3-201ENSMUST00000014065 Lce1a2Q9D1K4 149 aa4□□□□□ -1.77
Clip3-201ENSMUST00000014065 Krtap9-5A2A5X3 358 aa3.99□□□□□ -1.77
Clip3-201ENSMUST00000014065 2310046K23RikA0A0A6YVW6 87 aa3.97□□□□□ -1.77
Clip3-201ENSMUST00000014065 Krtap19-2Q925I0 141 aa3.95□□□□□ -1.78
Clip3-201ENSMUST00000014065 Prm1P02319 51 aa3.93□□□□□ -1.78
Clip3-201ENSMUST00000014065 Lce1hQ9D6R3 140 aa3.92□□□□□ -1.78
Clip3-201ENSMUST00000014065 Gm7735D3YX18 52 aa3.9□□□□□ -1.79
Clip3-201ENSMUST00000014065 SspoQ8CG65 4998 aa3.88□□□□□ -1.79
Clip3-201ENSMUST00000014065 Mt2P02798 61 aa3.77□□□□□ -1.81
Clip3-201ENSMUST00000014065 Lce1dQ9D731 133 aa3.76□□□□□ -1.81
Clip3-201ENSMUST00000014065 Mdn1A2ANY6 5589 aaKnown RBP3.74□□□□□ -1.81
Clip3-201ENSMUST00000014065 Gm6358A0A087WPH4 74 aa3.69□□□□□ -1.82
Clip3-201ENSMUST00000014065 4933428G20RikQ9D3X4 101 aa3.68□□□□□ -1.82
Clip3-201ENSMUST00000014065 Gm10272F7CZ33 110 aa3.65□□□□□ -1.83
Clip3-201ENSMUST00000014065 Gm10061D3Z714 54 aa3.6□□□□□ -1.83
Clip3-201ENSMUST00000014065 Lce1eQ9D139 143 aa3.6□□□□□ -1.83
Clip3-201ENSMUST00000014065 Sprr2gO70558 76 aa3.57□□□□□ -1.84
Clip3-201ENSMUST00000014065 Muc5bE9Q5I3 4800 aa3.57□□□□□ -1.84
Clip3-201ENSMUST00000014065 Gm11938Q9D3H4 131 aa3.55□□□□□ -1.84
Clip3-201ENSMUST00000014065 Syne1Q6ZWR6 8799 aa3.53□□□□□ -1.84
Clip3-201ENSMUST00000014065 Krtap22-2J3QNX6 67 aa3.52□□□□□ -1.85
Clip3-201ENSMUST00000014065 Lce1cQ9D1C5 147 aa3.47□□□□□ -1.85
Clip3-201ENSMUST00000014065 Gm10100J3QK64 120 aa3.46□□□□□ -1.86
Clip3-201ENSMUST00000014065 Muc16A0A140LJ72 8478 aa3.44□□□□□ -1.86
Clip3-201ENSMUST00000014065 Gm11569B1AQB1 180 aa3.44□□□□□ -1.86
Clip3-201ENSMUST00000014065 Sprr2dO70555 85 aa3.43□□□□□ -1.86
Clip3-201ENSMUST00000014065 Lce3bQ9CQM7 98 aa3.41□□□□□ -1.86
Clip3-201ENSMUST00000014065 Gm10142J3KMP7 120 aa3.36□□□□□ -1.87
Clip3-201ENSMUST00000014065 Krtap31-1Q9D644 177 aa3.35□□□□□ -1.87
Clip3-201ENSMUST00000014065 Lce1fB9EJP6 147 aa3.34□□□□□ -1.87
Clip3-201ENSMUST00000014065 Lce1a1Q9CQH5 143 aa3.34□□□□□ -1.87
Clip3-201ENSMUST00000014065 A0A1Y7VJH8 109 aa3.33□□□□□ -1.88
Clip3-201ENSMUST00000014065 Krtap31-2Q8CAY5 177 aa3.32□□□□□ -1.88
Clip3-201ENSMUST00000014065 Fsip2A2ARZ3 6995 aa3.31□□□□□ -1.88
Clip3-201ENSMUST00000014065 Lce3cQ91V05 98 aa3.29□□□□□ -1.88
Clip3-201ENSMUST00000014065 Gm11562A0PK51 136 aa3.28□□□□□ -1.88
Clip3-201ENSMUST00000014065 Lce3dE9Q8V1 98 aa3.26□□□□□ -1.89
Clip3-201ENSMUST00000014065 Krtap28-10A0A1Y7VP58 119 aa3.24□□□□□ -1.89
Clip3-201ENSMUST00000014065 Krtap19-4Q925H7 84 aa3.23□□□□□ -1.89
Clip3-201ENSMUST00000014065 Krtap4-6Q3V4B7 195 aa3.23□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms