RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Spink7Q6IE32 76 aa9.15□□□□□ -0.94
Ubp1-201ENSMUST00000009885 Gm17416Q30KP4 66 aa9.14□□□□□ -0.95
Ubp1-201ENSMUST00000009885 Ryr3A2AGL3 4863 aa9.1□□□□□ -0.95
Ubp1-201ENSMUST00000009885 2210017I01RikA0A0A6YVV1 95 aa9.08□□□□□ -0.96
Ubp1-201ENSMUST00000009885 Krtap19-5O08632 62 aa9.08□□□□□ -0.96
Ubp1-201ENSMUST00000009885 Fat3Q8BNA6 4555 aa9.05□□□□□ -0.96
Ubp1-201ENSMUST00000009885 Pkhd1l1Q80ZA4 4249 aa8.97□□□□□ -0.97
Ubp1-201ENSMUST00000009885 Krtap7-1Q9D3I6 87 aa8.96□□□□□ -0.98
Ubp1-201ENSMUST00000009885 Gm9112A2AI92 75 aa8.94□□□□□ -0.98
Ubp1-201ENSMUST00000009885 Mycbp2Q7TPH6 4711 aa8.9□□□□□ -0.98
Ubp1-201ENSMUST00000009885 Gm19668J3QMD1 248 aa8.88□□□□□ -0.99
Ubp1-201ENSMUST00000009885 Krtap13-1Q8K198 168 aa8.87□□□□□ -0.99
Ubp1-201ENSMUST00000009885 Camk2n1Q6QWF9 78 aa8.83□□□□□ -1
Ubp1-201ENSMUST00000009885 Gm40193A0A1B0GT39 78 aa8.83□□□□□ -1
Ubp1-201ENSMUST00000009885 Gm19402J3QJV4 266 aa8.78□□□□□ -1
Ubp1-201ENSMUST00000009885 Gm10318A0A1W2P728 225 aa8.78□□□□□ -1
Ubp1-201ENSMUST00000009885 Sec61bQ9CQS8 96 aaKnown RBP8.69□□□□□ -1.02
Ubp1-201ENSMUST00000009885 Ryr1E9PZQ0 5035 aa8.65□□□□□ -1.02
Ubp1-201ENSMUST00000009885 Gm17402F6Z0L5 76 aa8.64□□□□□ -1.03
Ubp1-201ENSMUST00000009885 Abca13Q5SSE9 5034 aa8.62□□□□□ -1.03
Ubp1-201ENSMUST00000009885 Crct1Q6PAI5 102 aa8.56□□□□□ -1.04
Ubp1-201ENSMUST00000009885 Dnah8Q91XQ0 4731 aa8.51□□□□□ -1.05
Ubp1-201ENSMUST00000009885 Kmt2cQ8BRH4 4903 aa8.49□□□□□ -1.05
Ubp1-201ENSMUST00000009885 HydinQ80W93 5154 aa8.47□□□□□ -1.05
Ubp1-201ENSMUST00000009885 Lrp2A2ARV4 4660 aa8.46□□□□□ -1.06
Ubp1-201ENSMUST00000009885 Sprr2a3Q4KL71 83 aa8.4□□□□□ -1.07
Ubp1-201ENSMUST00000009885 Sprr2a1Q9CQK8 83 aa8.4□□□□□ -1.07
Ubp1-201ENSMUST00000009885 Kiaa1109A2AAE1 5005 aa8.35□□□□□ -1.07
Ubp1-201ENSMUST00000009885 Krtap1-5A2A590 122 aa8.34□□□□□ -1.07
Ubp1-201ENSMUST00000009885 Ryr2E9Q401 4966 aaKnown RBP8.25□□□□□ -1.09
Ubp1-201ENSMUST00000009885 Tnp1P10856 55 aa8.25□□□□□ -1.09
Ubp1-201ENSMUST00000009885 Herc2Q4U2R1 4836 aa8.19□□□□□ -1.1
Ubp1-201ENSMUST00000009885 Dnhd1D3Z2X2 4750 aa8.04□□□□□ -1.12
Ubp1-201ENSMUST00000009885 Krtap16-3Q8C1I6 86 aa7.98□□□□□ -1.13
Ubp1-201ENSMUST00000009885 Krtap1-4Q3V2D6 188 aa7.92□□□□□ -1.14
Ubp1-201ENSMUST00000009885 Krtap19-1Q925H2 87 aa7.77□□□□□ -1.17
Ubp1-201ENSMUST00000009885 Krtap19-3Q925H6 87 aa7.77□□□□□ -1.17
Ubp1-201ENSMUST00000009885 PcloQ9QYX7 5068 aa7.74□□□□□ -1.17
Ubp1-201ENSMUST00000009885 Ubr4A2AN08 5180 aa7.65□□□□□ -1.18
Ubp1-201ENSMUST00000009885 Birc6O88738 4882 aa7.6□□□□□ -1.19
Ubp1-201ENSMUST00000009885 Fat4Q2PZL6 4981 aa7.59□□□□□ -1.19
Ubp1-201ENSMUST00000009885 Lce1jD3YUU5 139 aa7.57□□□□□ -1.2
Ubp1-201ENSMUST00000009885 Krtap19-9aF8WH65 55 aa7.55□□□□□ -1.2
Ubp1-201ENSMUST00000009885 Krtap12-1Q9Z287 130 aa7.53□□□□□ -1.2
Ubp1-201ENSMUST00000009885 ZanO88799 5376 aa7.5□□□□□ -1.21
Ubp1-201ENSMUST00000009885 LorP18165 486 aa7.47□□□□□ -1.21
Ubp1-201ENSMUST00000009885 Herc1E9PZP8 4859 aa7.42□□□□□ -1.22
Ubp1-201ENSMUST00000009885 4932415D10RikA0A1W2P6U8 4986 aa7.35□□□□□ -1.23
Ubp1-201ENSMUST00000009885 Krtap19-9bQ99NG9 58 aa7.3□□□□□ -1.24
Ubp1-201ENSMUST00000009885 2310046K23RikA0A0A6YVW6 87 aa7.27□□□□□ -1.25
Ubp1-201ENSMUST00000009885 Krtap8-1O08633 61 aa7.26□□□□□ -1.25
Ubp1-201ENSMUST00000009885 Ush2AQ2QI47 5193 aa7.23□□□□□ -1.25
Ubp1-201ENSMUST00000009885 Krtap17-1A2A5X6 109 aa7.19□□□□□ -1.26
Ubp1-201ENSMUST00000009885 Hmcn2A2AJ76 5100 aa7.19□□□□□ -1.26
Ubp1-201ENSMUST00000009885 Rnf213E9Q555 5152 aaKnown RBP7.15□□□□□ -1.26
Ubp1-201ENSMUST00000009885 Krtap1-3A2A588 173 aa7.14□□□□□ -1.27
Ubp1-201ENSMUST00000009885 Krtap9-3Q3V2C1 136 aa7.11□□□□□ -1.27
Ubp1-201ENSMUST00000009885 Lce1iQ9D6P5 149 aa7.02□□□□□ -1.29
Ubp1-201ENSMUST00000009885 Lce1a2Q9D1K4 149 aa6.99□□□□□ -1.29
Ubp1-201ENSMUST00000009885 Krtap9-5A2A5X3 358 aa6.99□□□□□ -1.29
Ubp1-201ENSMUST00000009885 4933428G20RikQ9D3X4 101 aa6.97□□□□□ -1.29
Ubp1-201ENSMUST00000009885 Lce1hQ9D6R3 140 aa6.96□□□□□ -1.3
Ubp1-201ENSMUST00000009885 Krtap19-2Q925I0 141 aa6.89□□□□□ -1.31
Ubp1-201ENSMUST00000009885 Gm18596A0A1W2P860 280 aa6.81□□□□□ -1.32
Ubp1-201ENSMUST00000009885 Lce1mQ9CR91 182 aa6.8□□□□□ -1.32
Ubp1-201ENSMUST00000009885 Lce1dQ9D731 133 aa6.76□□□□□ -1.33
Ubp1-201ENSMUST00000009885 Mt2P02798 61 aa6.65□□□□□ -1.34
Ubp1-201ENSMUST00000009885 Gm6358A0A087WPH4 74 aa6.59□□□□□ -1.36
Ubp1-201ENSMUST00000009885 Gm10272F7CZ33 110 aa6.56□□□□□ -1.36
Ubp1-201ENSMUST00000009885 Sprr2gO70558 76 aa6.51□□□□□ -1.37
Ubp1-201ENSMUST00000009885 Gm9789Q8BIG3 52 aa6.49□□□□□ -1.37
Ubp1-201ENSMUST00000009885 SspoQ8CG65 4998 aa6.49□□□□□ -1.37
Ubp1-201ENSMUST00000009885 Mdn1A2ANY6 5589 aaKnown RBP6.49□□□□□ -1.37
Ubp1-201ENSMUST00000009885 Lce1eQ9D139 143 aa6.47□□□□□ -1.37
Ubp1-201ENSMUST00000009885 Gm11938Q9D3H4 131 aa6.43□□□□□ -1.38
Ubp1-201ENSMUST00000009885 Gm10100J3QK64 120 aa6.38□□□□□ -1.39
Ubp1-201ENSMUST00000009885 Gm7735D3YX18 52 aa6.33□□□□□ -1.4
Ubp1-201ENSMUST00000009885 Prm1P02319 51 aa6.29□□□□□ -1.4
Ubp1-201ENSMUST00000009885 Syne1Q6ZWR6 8799 aa6.25□□□□□ -1.41
Ubp1-201ENSMUST00000009885 Krtap22-2J3QNX6 67 aa6.24□□□□□ -1.41
Ubp1-201ENSMUST00000009885 Lce3bQ9CQM7 98 aa6.24□□□□□ -1.41
Ubp1-201ENSMUST00000009885 Sprr2dO70555 85 aa6.22□□□□□ -1.41
Ubp1-201ENSMUST00000009885 Lce1cQ9D1C5 147 aa6.21□□□□□ -1.42
Ubp1-201ENSMUST00000009885 Gm10142J3KMP7 120 aa6.2□□□□□ -1.42
Ubp1-201ENSMUST00000009885 Gm10061D3Z714 54 aa6.14□□□□□ -1.43
Ubp1-201ENSMUST00000009885 Muc5bE9Q5I3 4800 aa6.13□□□□□ -1.43
Ubp1-201ENSMUST00000009885 Lce3cQ91V05 98 aa6.05□□□□□ -1.44
Ubp1-201ENSMUST00000009885 Muc16A0A140LJ72 8478 aa6.04□□□□□ -1.44
Ubp1-201ENSMUST00000009885 Lce3dE9Q8V1 98 aa5.99□□□□□ -1.45
Ubp1-201ENSMUST00000009885 Lce1fB9EJP6 147 aa5.98□□□□□ -1.45
Ubp1-201ENSMUST00000009885 Lce1a1Q9CQH5 143 aa5.98□□□□□ -1.45
Ubp1-201ENSMUST00000009885 Krtap19-4Q925H7 84 aa5.88□□□□□ -1.47
Ubp1-201ENSMUST00000009885 Gm11562A0PK51 136 aa5.86□□□□□ -1.47
Ubp1-201ENSMUST00000009885 Lce3eF8VQJ0 98 aa5.81□□□□□ -1.48
Ubp1-201ENSMUST00000009885 Lce3fQ6PAI4 98 aa5.81□□□□□ -1.48
Ubp1-201ENSMUST00000009885 Sprr2iO70560 76 aa5.77□□□□□ -1.49
Ubp1-201ENSMUST00000009885 Lce3aQ497I5 98 aa5.76□□□□□ -1.49
Ubp1-201ENSMUST00000009885 Gm11569B1AQB1 180 aa5.69□□□□□ -1.5
Ubp1-201ENSMUST00000009885 Krtap31-1Q9D644 177 aa5.65□□□□□ -1.5
Ubp1-201ENSMUST00000009885 Sprr2hO70559 108 aa5.61□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms