RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Spink7Q6IE32 76 aa9,15□□□□□ -0,94
Ubp1-201ENSMUST00000009885 Gm17416Q30KP4 66 aa9,14□□□□□ -0,95
Ubp1-201ENSMUST00000009885 Ryr3A2AGL3 4863 aa9,1□□□□□ -0,95
Ubp1-201ENSMUST00000009885 2210017I01RikA0A0A6YVV1 95 aa9,08□□□□□ -0,96
Ubp1-201ENSMUST00000009885 Krtap19-5O08632 62 aa9,08□□□□□ -0,96
Ubp1-201ENSMUST00000009885 Fat3Q8BNA6 4555 aa9,05□□□□□ -0,96
Ubp1-201ENSMUST00000009885 Pkhd1l1Q80ZA4 4249 aa8,97□□□□□ -0,97
Ubp1-201ENSMUST00000009885 Krtap7-1Q9D3I6 87 aa8,96□□□□□ -0,98
Ubp1-201ENSMUST00000009885 Gm9112A2AI92 75 aa8,94□□□□□ -0,98
Ubp1-201ENSMUST00000009885 Mycbp2Q7TPH6 4711 aa8,9□□□□□ -0,98
Ubp1-201ENSMUST00000009885 Gm19668J3QMD1 248 aa8,88□□□□□ -0,99
Ubp1-201ENSMUST00000009885 Krtap13-1Q8K198 168 aa8,87□□□□□ -0,99
Ubp1-201ENSMUST00000009885 Camk2n1Q6QWF9 78 aa8,83□□□□□ -1
Ubp1-201ENSMUST00000009885 Gm40193A0A1B0GT39 78 aa8,83□□□□□ -1
Ubp1-201ENSMUST00000009885 Gm19402J3QJV4 266 aa8,78□□□□□ -1
Ubp1-201ENSMUST00000009885 Gm10318A0A1W2P728 225 aa8,78□□□□□ -1
Ubp1-201ENSMUST00000009885 Sec61bQ9CQS8 96 aaKnown RBP8,69□□□□□ -1,02
Ubp1-201ENSMUST00000009885 Ryr1E9PZQ0 5035 aa8,65□□□□□ -1,02
Ubp1-201ENSMUST00000009885 Gm17402F6Z0L5 76 aa8,64□□□□□ -1,03
Ubp1-201ENSMUST00000009885 Abca13Q5SSE9 5034 aa8,62□□□□□ -1,03
Ubp1-201ENSMUST00000009885 Crct1Q6PAI5 102 aa8,56□□□□□ -1,04
Ubp1-201ENSMUST00000009885 Dnah8Q91XQ0 4731 aa8,51□□□□□ -1,05
Ubp1-201ENSMUST00000009885 Kmt2cQ8BRH4 4903 aa8,49□□□□□ -1,05
Ubp1-201ENSMUST00000009885 HydinQ80W93 5154 aa8,47□□□□□ -1,05
Ubp1-201ENSMUST00000009885 Lrp2A2ARV4 4660 aa8,46□□□□□ -1,06
Ubp1-201ENSMUST00000009885 Sprr2a3Q4KL71 83 aa8,4□□□□□ -1,07
Ubp1-201ENSMUST00000009885 Sprr2a1Q9CQK8 83 aa8,4□□□□□ -1,07
Ubp1-201ENSMUST00000009885 Kiaa1109A2AAE1 5005 aa8,35□□□□□ -1,07
Ubp1-201ENSMUST00000009885 Krtap1-5A2A590 122 aa8,34□□□□□ -1,07
Ubp1-201ENSMUST00000009885 Ryr2E9Q401 4966 aaKnown RBP8,25□□□□□ -1,09
Ubp1-201ENSMUST00000009885 Tnp1P10856 55 aa8,25□□□□□ -1,09
Ubp1-201ENSMUST00000009885 Herc2Q4U2R1 4836 aa8,19□□□□□ -1,1
Ubp1-201ENSMUST00000009885 Dnhd1D3Z2X2 4750 aa8,04□□□□□ -1,12
Ubp1-201ENSMUST00000009885 Krtap16-3Q8C1I6 86 aa7,98□□□□□ -1,13
Ubp1-201ENSMUST00000009885 Krtap1-4Q3V2D6 188 aa7,92□□□□□ -1,14
Ubp1-201ENSMUST00000009885 Krtap19-1Q925H2 87 aa7,77□□□□□ -1,17
Ubp1-201ENSMUST00000009885 Krtap19-3Q925H6 87 aa7,77□□□□□ -1,17
Ubp1-201ENSMUST00000009885 PcloQ9QYX7 5068 aa7,74□□□□□ -1,17
Ubp1-201ENSMUST00000009885 Ubr4A2AN08 5180 aa7,65□□□□□ -1,18
Ubp1-201ENSMUST00000009885 Birc6O88738 4882 aa7,6□□□□□ -1,19
Ubp1-201ENSMUST00000009885 Fat4Q2PZL6 4981 aa7,59□□□□□ -1,19
Ubp1-201ENSMUST00000009885 Lce1jD3YUU5 139 aa7,57□□□□□ -1,2
Ubp1-201ENSMUST00000009885 Krtap19-9aF8WH65 55 aa7,55□□□□□ -1,2
Ubp1-201ENSMUST00000009885 Krtap12-1Q9Z287 130 aa7,53□□□□□ -1,2
Ubp1-201ENSMUST00000009885 ZanO88799 5376 aa7,5□□□□□ -1,21
Ubp1-201ENSMUST00000009885 LorP18165 486 aa7,47□□□□□ -1,21
Ubp1-201ENSMUST00000009885 Herc1E9PZP8 4859 aa7,42□□□□□ -1,22
Ubp1-201ENSMUST00000009885 4932415D10RikA0A1W2P6U8 4986 aa7,35□□□□□ -1,23
Ubp1-201ENSMUST00000009885 Krtap19-9bQ99NG9 58 aa7,3□□□□□ -1,24
Ubp1-201ENSMUST00000009885 2310046K23RikA0A0A6YVW6 87 aa7,27□□□□□ -1,25
Ubp1-201ENSMUST00000009885 Krtap8-1O08633 61 aa7,26□□□□□ -1,25
Ubp1-201ENSMUST00000009885 Ush2AQ2QI47 5193 aa7,23□□□□□ -1,25
Ubp1-201ENSMUST00000009885 Krtap17-1A2A5X6 109 aa7,19□□□□□ -1,26
Ubp1-201ENSMUST00000009885 Hmcn2A2AJ76 5100 aa7,19□□□□□ -1,26
Ubp1-201ENSMUST00000009885 Rnf213E9Q555 5152 aaKnown RBP7,15□□□□□ -1,26
Ubp1-201ENSMUST00000009885 Krtap1-3A2A588 173 aa7,14□□□□□ -1,27
Ubp1-201ENSMUST00000009885 Krtap9-3Q3V2C1 136 aa7,11□□□□□ -1,27
Ubp1-201ENSMUST00000009885 Lce1iQ9D6P5 149 aa7,02□□□□□ -1,29
Ubp1-201ENSMUST00000009885 Lce1a2Q9D1K4 149 aa6,99□□□□□ -1,29
Ubp1-201ENSMUST00000009885 Krtap9-5A2A5X3 358 aa6,99□□□□□ -1,29
Ubp1-201ENSMUST00000009885 4933428G20RikQ9D3X4 101 aa6,97□□□□□ -1,29
Ubp1-201ENSMUST00000009885 Lce1hQ9D6R3 140 aa6,96□□□□□ -1,3
Ubp1-201ENSMUST00000009885 Krtap19-2Q925I0 141 aa6,89□□□□□ -1,31
Ubp1-201ENSMUST00000009885 Gm18596A0A1W2P860 280 aa6,81□□□□□ -1,32
Ubp1-201ENSMUST00000009885 Lce1mQ9CR91 182 aa6,8□□□□□ -1,32
Ubp1-201ENSMUST00000009885 Lce1dQ9D731 133 aa6,76□□□□□ -1,33
Ubp1-201ENSMUST00000009885 Mt2P02798 61 aa6,65□□□□□ -1,34
Ubp1-201ENSMUST00000009885 Gm6358A0A087WPH4 74 aa6,59□□□□□ -1,36
Ubp1-201ENSMUST00000009885 Gm10272F7CZ33 110 aa6,56□□□□□ -1,36
Ubp1-201ENSMUST00000009885 Sprr2gO70558 76 aa6,51□□□□□ -1,37
Ubp1-201ENSMUST00000009885 Gm9789Q8BIG3 52 aa6,49□□□□□ -1,37
Ubp1-201ENSMUST00000009885 SspoQ8CG65 4998 aa6,49□□□□□ -1,37
Ubp1-201ENSMUST00000009885 Mdn1A2ANY6 5589 aaKnown RBP6,49□□□□□ -1,37
Ubp1-201ENSMUST00000009885 Lce1eQ9D139 143 aa6,47□□□□□ -1,37
Ubp1-201ENSMUST00000009885 Gm11938Q9D3H4 131 aa6,43□□□□□ -1,38
Ubp1-201ENSMUST00000009885 Gm10100J3QK64 120 aa6,38□□□□□ -1,39
Ubp1-201ENSMUST00000009885 Gm7735D3YX18 52 aa6,33□□□□□ -1,4
Ubp1-201ENSMUST00000009885 Prm1P02319 51 aa6,29□□□□□ -1,4
Ubp1-201ENSMUST00000009885 Syne1Q6ZWR6 8799 aa6,25□□□□□ -1,41
Ubp1-201ENSMUST00000009885 Krtap22-2J3QNX6 67 aa6,24□□□□□ -1,41
Ubp1-201ENSMUST00000009885 Lce3bQ9CQM7 98 aa6,24□□□□□ -1,41
Ubp1-201ENSMUST00000009885 Sprr2dO70555 85 aa6,22□□□□□ -1,41
Ubp1-201ENSMUST00000009885 Lce1cQ9D1C5 147 aa6,21□□□□□ -1,42
Ubp1-201ENSMUST00000009885 Gm10142J3KMP7 120 aa6,2□□□□□ -1,42
Ubp1-201ENSMUST00000009885 Gm10061D3Z714 54 aa6,14□□□□□ -1,43
Ubp1-201ENSMUST00000009885 Muc5bE9Q5I3 4800 aa6,13□□□□□ -1,43
Ubp1-201ENSMUST00000009885 Lce3cQ91V05 98 aa6,05□□□□□ -1,44
Ubp1-201ENSMUST00000009885 Muc16A0A140LJ72 8478 aa6,04□□□□□ -1,44
Ubp1-201ENSMUST00000009885 Lce3dE9Q8V1 98 aa5,99□□□□□ -1,45
Ubp1-201ENSMUST00000009885 Lce1fB9EJP6 147 aa5,98□□□□□ -1,45
Ubp1-201ENSMUST00000009885 Lce1a1Q9CQH5 143 aa5,98□□□□□ -1,45
Ubp1-201ENSMUST00000009885 Krtap19-4Q925H7 84 aa5,88□□□□□ -1,47
Ubp1-201ENSMUST00000009885 Gm11562A0PK51 136 aa5,86□□□□□ -1,47
Ubp1-201ENSMUST00000009885 Lce3eF8VQJ0 98 aa5,81□□□□□ -1,48
Ubp1-201ENSMUST00000009885 Lce3fQ6PAI4 98 aa5,81□□□□□ -1,48
Ubp1-201ENSMUST00000009885 Sprr2iO70560 76 aa5,77□□□□□ -1,49
Ubp1-201ENSMUST00000009885 Lce3aQ497I5 98 aa5,76□□□□□ -1,49
Ubp1-201ENSMUST00000009885 Gm11569B1AQB1 180 aa5,69□□□□□ -1,5
Ubp1-201ENSMUST00000009885 Krtap31-1Q9D644 177 aa5,65□□□□□ -1,5
Ubp1-201ENSMUST00000009885 Sprr2hO70559 108 aa5,61□□□□□ -1,51
Retrieved 100 of 22,080 RNA–protein pairs in 55,9 ms