RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 2210017I01RikA0A0A6YVV1 95 aa5.96□□□□□ -1.46
Rfx1-201ENSMUST00000005600 B930094E09RikQ8C4T2 136 aa5.93□□□□□ -1.46
Rfx1-201ENSMUST00000005600 BC029722A0A0N4SW31 51 aa5.92□□□□□ -1.46
Rfx1-201ENSMUST00000005600 Fat3Q8BNA6 4555 aa5.9□□□□□ -1.46
Rfx1-201ENSMUST00000005600 Gm9112A2AI92 75 aa5.82□□□□□ -1.48
Rfx1-201ENSMUST00000005600 2310057N15RikQ9D6T8 200 aa5.79□□□□□ -1.48
Rfx1-201ENSMUST00000005600 Mycbp2Q7TPH6 4711 aa5.78□□□□□ -1.48
Rfx1-201ENSMUST00000005600 Krtap13-1Q8K198 168 aa5.76□□□□□ -1.49
Rfx1-201ENSMUST00000005600 Kmt2cQ8BRH4 4903 aa5.75□□□□□ -1.49
Rfx1-201ENSMUST00000005600 Fam229aB2KGE5 128 aa5.72□□□□□ -1.49
Rfx1-201ENSMUST00000005600 Gm17402F6Z0L5 76 aa5.72□□□□□ -1.49
Rfx1-201ENSMUST00000005600 Ryr2E9Q401 4966 aaKnown RBP5.7□□□□□ -1.5
Rfx1-201ENSMUST00000005600 Krtap7-1Q9D3I6 87 aa5.7□□□□□ -1.5
Rfx1-201ENSMUST00000005600 Sec61bQ9CQS8 96 aaKnown RBP5.68□□□□□ -1.5
Rfx1-201ENSMUST00000005600 Spink7Q6IE32 76 aa5.68□□□□□ -1.5
Rfx1-201ENSMUST00000005600 Gm40193A0A1B0GT39 78 aa5.67□□□□□ -1.5
Rfx1-201ENSMUST00000005600 Dnah8Q91XQ0 4731 aa5.67□□□□□ -1.5
Rfx1-201ENSMUST00000005600 Abca13Q5SSE9 5034 aa5.67□□□□□ -1.5
Rfx1-201ENSMUST00000005600 Gm19668J3QMD1 248 aa5.62□□□□□ -1.51
Rfx1-201ENSMUST00000005600 Gm19402J3QJV4 266 aa5.6□□□□□ -1.51
Rfx1-201ENSMUST00000005600 Ryr1E9PZQ0 5035 aa5.6□□□□□ -1.51
Rfx1-201ENSMUST00000005600 Krtap1-5A2A590 122 aa5.57□□□□□ -1.52
Rfx1-201ENSMUST00000005600 Sprr2a3Q4KL71 83 aa5.51□□□□□ -1.53
Rfx1-201ENSMUST00000005600 Sprr2a1Q9CQK8 83 aa5.51□□□□□ -1.53
Rfx1-201ENSMUST00000005600 Camk2n1Q6QWF9 78 aa5.51□□□□□ -1.53
Rfx1-201ENSMUST00000005600 Kiaa1109A2AAE1 5005 aa5.46□□□□□ -1.54
Rfx1-201ENSMUST00000005600 Gm10318A0A1W2P728 225 aa5.45□□□□□ -1.54
Rfx1-201ENSMUST00000005600 Crct1Q6PAI5 102 aa5.39□□□□□ -1.55
Rfx1-201ENSMUST00000005600 Herc2Q4U2R1 4836 aa5.39□□□□□ -1.55
Rfx1-201ENSMUST00000005600 Lrp2A2ARV4 4660 aa5.38□□□□□ -1.55
Rfx1-201ENSMUST00000005600 Dnhd1D3Z2X2 4750 aa5.37□□□□□ -1.55
Rfx1-201ENSMUST00000005600 HydinQ80W93 5154 aa5.33□□□□□ -1.56
Rfx1-201ENSMUST00000005600 Krtap16-3Q8C1I6 86 aa5.32□□□□□ -1.56
Rfx1-201ENSMUST00000005600 Birc6O88738 4882 aa5.25□□□□□ -1.57
Rfx1-201ENSMUST00000005600 Krtap1-4Q3V2D6 188 aa5.23□□□□□ -1.57
Rfx1-201ENSMUST00000005600 Krtap19-1Q925H2 87 aa5.22□□□□□ -1.57
Rfx1-201ENSMUST00000005600 Tnp1P10856 55 aa5.19□□□□□ -1.58
Rfx1-201ENSMUST00000005600 Krtap19-3Q925H6 87 aa5.18□□□□□ -1.58
Rfx1-201ENSMUST00000005600 Gm18596A0A1W2P860 280 aa5.09□□□□□ -1.59
Rfx1-201ENSMUST00000005600 PcloQ9QYX7 5068 aa5.01□□□□□ -1.61
Rfx1-201ENSMUST00000005600 Krtap19-9aF8WH65 55 aa4.97□□□□□ -1.61
Rfx1-201ENSMUST00000005600 Krtap12-1Q9Z287 130 aa4.96□□□□□ -1.62
Rfx1-201ENSMUST00000005600 Lce1jD3YUU5 139 aa4.95□□□□□ -1.62
Rfx1-201ENSMUST00000005600 Herc1E9PZP8 4859 aa4.95□□□□□ -1.62
Rfx1-201ENSMUST00000005600 Lce1mQ9CR91 182 aa4.87□□□□□ -1.63
Rfx1-201ENSMUST00000005600 ZanO88799 5376 aa4.85□□□□□ -1.63
Rfx1-201ENSMUST00000005600 LorP18165 486 aa4.83□□□□□ -1.64
Rfx1-201ENSMUST00000005600 4932415D10RikA0A1W2P6U8 4986 aa4.83□□□□□ -1.64
Rfx1-201ENSMUST00000005600 Krtap1-3A2A588 173 aa4.82□□□□□ -1.64
Rfx1-201ENSMUST00000005600 Krtap8-1O08633 61 aa4.81□□□□□ -1.64
Rfx1-201ENSMUST00000005600 Ubr4A2AN08 5180 aa4.79□□□□□ -1.64
Rfx1-201ENSMUST00000005600 2310046K23RikA0A0A6YVW6 87 aa4.78□□□□□ -1.64
Rfx1-201ENSMUST00000005600 Krtap19-9bQ99NG9 58 aa4.77□□□□□ -1.65
Rfx1-201ENSMUST00000005600 Fat4Q2PZL6 4981 aa4.76□□□□□ -1.65
Rfx1-201ENSMUST00000005600 Hmcn2A2AJ76 5100 aa4.76□□□□□ -1.65
Rfx1-201ENSMUST00000005600 Ush2AQ2QI47 5193 aa4.68□□□□□ -1.66
Rfx1-201ENSMUST00000005600 Krtap17-1A2A5X6 109 aa4.64□□□□□ -1.67
Rfx1-201ENSMUST00000005600 Lce1iQ9D6P5 149 aa4.63□□□□□ -1.67
Rfx1-201ENSMUST00000005600 Lce1a2Q9D1K4 149 aa4.6□□□□□ -1.67
Rfx1-201ENSMUST00000005600 Rnf213E9Q555 5152 aaKnown RBP4.59□□□□□ -1.67
Rfx1-201ENSMUST00000005600 Krtap19-2Q925I0 141 aa4.59□□□□□ -1.68
Rfx1-201ENSMUST00000005600 Krtap9-5A2A5X3 358 aa4.58□□□□□ -1.68
Rfx1-201ENSMUST00000005600 Krtap9-3Q3V2C1 136 aa4.55□□□□□ -1.68
Rfx1-201ENSMUST00000005600 Gm9789Q8BIG3 52 aa4.54□□□□□ -1.68
Rfx1-201ENSMUST00000005600 Prm1P02319 51 aa4.52□□□□□ -1.69
Rfx1-201ENSMUST00000005600 Lce1hQ9D6R3 140 aa4.5□□□□□ -1.69
Rfx1-201ENSMUST00000005600 Gm7735D3YX18 52 aa4.47□□□□□ -1.69
Rfx1-201ENSMUST00000005600 4933428G20RikQ9D3X4 101 aa4.39□□□□□ -1.71
Rfx1-201ENSMUST00000005600 Mt2P02798 61 aa4.36□□□□□ -1.71
Rfx1-201ENSMUST00000005600 SspoQ8CG65 4998 aa4.34□□□□□ -1.71
Rfx1-201ENSMUST00000005600 Mdn1A2ANY6 5589 aaKnown RBP4.31□□□□□ -1.72
Rfx1-201ENSMUST00000005600 Lce1dQ9D731 133 aa4.31□□□□□ -1.72
Rfx1-201ENSMUST00000005600 Gm6358A0A087WPH4 74 aa4.27□□□□□ -1.73
Rfx1-201ENSMUST00000005600 Sprr2gO70558 76 aa4.27□□□□□ -1.73
Rfx1-201ENSMUST00000005600 Sprr2kO70562 68 aa4.18□□□□□ -1.74
Rfx1-201ENSMUST00000005600 Gm10061D3Z714 54 aa4.17□□□□□ -1.74
Rfx1-201ENSMUST00000005600 Gm10272F7CZ33 110 aa4.16□□□□□ -1.74
Rfx1-201ENSMUST00000005600 Gm11938Q9D3H4 131 aa4.16□□□□□ -1.74
Rfx1-201ENSMUST00000005600 Muc5bE9Q5I3 4800 aa4.16□□□□□ -1.74
Rfx1-201ENSMUST00000005600 Lce1eQ9D139 143 aa4.15□□□□□ -1.75
Rfx1-201ENSMUST00000005600 Sprr2dO70555 85 aa4.14□□□□□ -1.75
Rfx1-201ENSMUST00000005600 Krtap22-2J3QNX6 67 aa4.1□□□□□ -1.75
Rfx1-201ENSMUST00000005600 Gm11569B1AQB1 180 aa4.04□□□□□ -1.76
Rfx1-201ENSMUST00000005600 Krtap4-2B1AQ85 167 aa3.99□□□□□ -1.77
Rfx1-201ENSMUST00000005600 Gm10100J3QK64 120 aa3.97□□□□□ -1.77
Rfx1-201ENSMUST00000005600 Syne1Q6ZWR6 8799 aa3.97□□□□□ -1.77
Rfx1-201ENSMUST00000005600 Krtap31-1Q9D644 177 aa3.95□□□□□ -1.78
Rfx1-201ENSMUST00000005600 Lce1cQ9D1C5 147 aa3.95□□□□□ -1.78
Rfx1-201ENSMUST00000005600 Muc16A0A140LJ72 8478 aa3.95□□□□□ -1.78
Rfx1-201ENSMUST00000005600 Gm11562A0PK51 136 aa3.94□□□□□ -1.78
Rfx1-201ENSMUST00000005600 Lce3bQ9CQM7 98 aa3.93□□□□□ -1.78
Rfx1-201ENSMUST00000005600 Gm10142J3KMP7 120 aa3.89□□□□□ -1.79
Rfx1-201ENSMUST00000005600 Krtap19-4Q925H7 84 aa3.89□□□□□ -1.79
Rfx1-201ENSMUST00000005600 Lce1gQ9D195 139 aa3.86□□□□□ -1.79
Rfx1-201ENSMUST00000005600 Krtap4-6Q3V4B7 195 aa3.84□□□□□ -1.8
Rfx1-201ENSMUST00000005600 Gm38119A0A0A6YX29 146 aa3.81□□□□□ -1.8
Rfx1-201ENSMUST00000005600 Lce1fB9EJP6 147 aa3.81□□□□□ -1.8
Rfx1-201ENSMUST00000005600 Lce1a1Q9CQH5 143 aa3.81□□□□□ -1.8
Rfx1-201ENSMUST00000005600 Fsip2A2ARZ3 6995 aa3.79□□□□□ -1.8
Rfx1-201ENSMUST00000005600 Lce3cQ91V05 98 aa3.78□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 62.1 ms