RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Krtap3-1A2A591 98 aa4.64□□□□□ -1.67
Col6a1-201ENSMUST00000001147 Lrp1Q91ZX7 4545 aaKnown RBP4.63□□□□□ -1.67
Col6a1-201ENSMUST00000001147 Ryr3A2AGL3 4863 aa4.63□□□□□ -1.67
Col6a1-201ENSMUST00000001147 Dync1h1Q9JHU4 4644 aaKnown RBP4.61□□□□□ -1.67
Col6a1-201ENSMUST00000001147 Vps13bQ80TY5 3993 aa4.59□□□□□ -1.67
Col6a1-201ENSMUST00000001147 SacsQ9JLC8 4582 aa4.59□□□□□ -1.68
Col6a1-201ENSMUST00000001147 Fat1A0A1L1SQU7 4645 aa4.57□□□□□ -1.68
Col6a1-201ENSMUST00000001147 Krtap13-1Q8K198 168 aa4.57□□□□□ -1.68
Col6a1-201ENSMUST00000001147 Pkd1O08852 4293 aa4.57□□□□□ -1.68
Col6a1-201ENSMUST00000001147 Crct1Q6PAI5 102 aa4.55□□□□□ -1.68
Col6a1-201ENSMUST00000001147 Ryr1E9PZQ0 5035 aa4.53□□□□□ -1.68
Col6a1-201ENSMUST00000001147 Fat3Q8BNA6 4555 aa4.52□□□□□ -1.69
Col6a1-201ENSMUST00000001147 Tnp1P10856 55 aa4.48□□□□□ -1.69
Col6a1-201ENSMUST00000001147 Mycbp2Q7TPH6 4711 aa4.47□□□□□ -1.69
Col6a1-201ENSMUST00000001147 Fat2Q5F226 4351 aa4.47□□□□□ -1.69
Col6a1-201ENSMUST00000001147 Gm17402F6Z0L5 76 aa4.41□□□□□ -1.7
Col6a1-201ENSMUST00000001147 HydinQ80W93 5154 aa4.37□□□□□ -1.71
Col6a1-201ENSMUST00000001147 Krtap7-1Q9D3I6 87 aa4.34□□□□□ -1.71
Col6a1-201ENSMUST00000001147 Gm19402J3QJV4 266 aa4.33□□□□□ -1.72
Col6a1-201ENSMUST00000001147 Kiaa1109A2AAE1 5005 aa4.31□□□□□ -1.72
Col6a1-201ENSMUST00000001147 Pkhd1E9PZ36 4059 aa4.3□□□□□ -1.72
Col6a1-201ENSMUST00000001147 Pkhd1l1Q80ZA4 4249 aa4.3□□□□□ -1.72
Col6a1-201ENSMUST00000001147 Lrp2A2ARV4 4660 aa4.29□□□□□ -1.72
Col6a1-201ENSMUST00000001147 Abca13Q5SSE9 5034 aa4.27□□□□□ -1.73
Col6a1-201ENSMUST00000001147 Krtap1-5A2A590 122 aa4.27□□□□□ -1.73
Col6a1-201ENSMUST00000001147 Herc2Q4U2R1 4836 aa4.25□□□□□ -1.73
Col6a1-201ENSMUST00000001147 Ryr2E9Q401 4966 aaKnown RBP4.23□□□□□ -1.73
Col6a1-201ENSMUST00000001147 Sprr2a3Q4KL71 83 aa4.21□□□□□ -1.74
Col6a1-201ENSMUST00000001147 Sprr2a1Q9CQK8 83 aa4.21□□□□□ -1.74
Col6a1-201ENSMUST00000001147 Gm19668J3QMD1 248 aa4.21□□□□□ -1.74
Col6a1-201ENSMUST00000001147 Kmt2cQ8BRH4 4903 aa4.19□□□□□ -1.74
Col6a1-201ENSMUST00000001147 Dnah8Q91XQ0 4731 aa4.19□□□□□ -1.74
Col6a1-201ENSMUST00000001147 Gm18596A0A1W2P860 280 aa4.16□□□□□ -1.74
Col6a1-201ENSMUST00000001147 Krtap16-3Q8C1I6 86 aa4.1□□□□□ -1.75
Col6a1-201ENSMUST00000001147 Krtap1-4Q3V2D6 188 aa4.1□□□□□ -1.75
Col6a1-201ENSMUST00000001147 LorP18165 486 aa4.06□□□□□ -1.76
Col6a1-201ENSMUST00000001147 Dnhd1D3Z2X2 4750 aa4.04□□□□□ -1.76
Col6a1-201ENSMUST00000001147 Krtap19-3Q925H6 87 aa4.02□□□□□ -1.77
Col6a1-201ENSMUST00000001147 Krtap19-1Q925H2 87 aa4□□□□□ -1.77
Col6a1-201ENSMUST00000001147 Krtap19-9aF8WH65 55 aa3.96□□□□□ -1.78
Col6a1-201ENSMUST00000001147 Lce1mQ9CR91 182 aa3.93□□□□□ -1.78
Col6a1-201ENSMUST00000001147 Krtap12-1Q9Z287 130 aa3.93□□□□□ -1.78
Col6a1-201ENSMUST00000001147 4933428G20RikQ9D3X4 101 aa3.93□□□□□ -1.78
Col6a1-201ENSMUST00000001147 Birc6O88738 4882 aa3.92□□□□□ -1.78
Col6a1-201ENSMUST00000001147 PcloQ9QYX7 5068 aa3.88□□□□□ -1.79
Col6a1-201ENSMUST00000001147 Mdn1A2ANY6 5589 aaKnown RBP3.84□□□□□ -1.79
Col6a1-201ENSMUST00000001147 Lce1jD3YUU5 139 aa3.84□□□□□ -1.79
Col6a1-201ENSMUST00000001147 Herc1E9PZP8 4859 aa3.82□□□□□ -1.8
Col6a1-201ENSMUST00000001147 Ubr4A2AN08 5180 aa3.79□□□□□ -1.8
Col6a1-201ENSMUST00000001147 Krtap1-3A2A588 173 aa3.77□□□□□ -1.81
Col6a1-201ENSMUST00000001147 Krtap19-9bQ99NG9 58 aa3.77□□□□□ -1.81
Col6a1-201ENSMUST00000001147 Gm6358A0A087WPH4 74 aa3.76□□□□□ -1.81
Col6a1-201ENSMUST00000001147 Fat4Q2PZL6 4981 aa3.73□□□□□ -1.81
Col6a1-201ENSMUST00000001147 ZanO88799 5376 aa3.72□□□□□ -1.81
Col6a1-201ENSMUST00000001147 Syne1Q6ZWR6 8799 aa3.71□□□□□ -1.82
Col6a1-201ENSMUST00000001147 Krtap9-5A2A5X3 358 aa3.71□□□□□ -1.82
Col6a1-201ENSMUST00000001147 Krtap8-1O08633 61 aa3.68□□□□□ -1.82
Col6a1-201ENSMUST00000001147 Muc16A0A140LJ72 8478 aa3.64□□□□□ -1.83
Col6a1-201ENSMUST00000001147 4932415D10RikA0A1W2P6U8 4986 aa3.64□□□□□ -1.83
Col6a1-201ENSMUST00000001147 Krtap17-1A2A5X6 109 aa3.62□□□□□ -1.83
Col6a1-201ENSMUST00000001147 Ush2AQ2QI47 5193 aa3.61□□□□□ -1.83
Col6a1-201ENSMUST00000001147 Krtap19-2Q925I0 141 aa3.61□□□□□ -1.83
Col6a1-201ENSMUST00000001147 Prm1P02319 51 aa3.61□□□□□ -1.83
Col6a1-201ENSMUST00000001147 Gm7735D3YX18 52 aa3.59□□□□□ -1.83
Col6a1-201ENSMUST00000001147 Hmcn2A2AJ76 5100 aa3.57□□□□□ -1.84
Col6a1-201ENSMUST00000001147 Rnf213E9Q555 5152 aaKnown RBP3.56□□□□□ -1.84
Col6a1-201ENSMUST00000001147 2310046K23RikA0A0A6YVW6 87 aa3.56□□□□□ -1.84
Col6a1-201ENSMUST00000001147 Sprr2kO70562 68 aa3.55□□□□□ -1.84
Col6a1-201ENSMUST00000001147 Gm9789Q8BIG3 52 aa3.55□□□□□ -1.84
Col6a1-201ENSMUST00000001147 Lce1iQ9D6P5 149 aa3.55□□□□□ -1.84
Col6a1-201ENSMUST00000001147 Lce1a2Q9D1K4 149 aa3.52□□□□□ -1.85
Col6a1-201ENSMUST00000001147 Mt2P02798 61 aa3.5□□□□□ -1.85
Col6a1-201ENSMUST00000001147 Krtap9-3Q3V2C1 136 aa3.47□□□□□ -1.85
Col6a1-201ENSMUST00000001147 Gm10272F7CZ33 110 aa3.41□□□□□ -1.86
Col6a1-201ENSMUST00000001147 Lce1hQ9D6R3 140 aa3.41□□□□□ -1.86
Col6a1-201ENSMUST00000001147 Gm10061D3Z714 54 aa3.36□□□□□ -1.87
Col6a1-201ENSMUST00000001147 Krtap22-2J3QNX6 67 aa3.34□□□□□ -1.88
Col6a1-201ENSMUST00000001147 Fsip2A2ARZ3 6995 aa3.32□□□□□ -1.88
Col6a1-201ENSMUST00000001147 Gm38119A0A0A6YX29 146 aa3.29□□□□□ -1.88
Col6a1-201ENSMUST00000001147 Gm11569B1AQB1 180 aa3.29□□□□□ -1.88
Col6a1-201ENSMUST00000001147 Gm10100J3QK64 120 aa3.26□□□□□ -1.89
Col6a1-201ENSMUST00000001147 Sprr2gO70558 76 aa3.26□□□□□ -1.89
Col6a1-201ENSMUST00000001147 Krtap4-2B1AQ85 167 aa3.25□□□□□ -1.89
Col6a1-201ENSMUST00000001147 Macf1Q9QXZ0 7354 aaKnown RBP3.25□□□□□ -1.89
Col6a1-201ENSMUST00000001147 Lce3bQ9CQM7 98 aa3.21□□□□□ -1.89
Col6a1-201ENSMUST00000001147 Lce1dQ9D731 133 aa3.2□□□□□ -1.9
Col6a1-201ENSMUST00000001147 Gm10142J3KMP7 120 aa3.17□□□□□ -1.9
Col6a1-201ENSMUST00000001147 Lce3cQ91V05 98 aa3.16□□□□□ -1.9
Col6a1-201ENSMUST00000001147 Krtap4-6Q3V4B7 195 aa3.15□□□□□ -1.91
Col6a1-201ENSMUST00000001147 SspoQ8CG65 4998 aa3.15□□□□□ -1.91
Col6a1-201ENSMUST00000001147 Muc5bE9Q5I3 4800 aa3.13□□□□□ -1.91
Col6a1-201ENSMUST00000001147 Lce1gQ9D195 139 aa3.13□□□□□ -1.91
Col6a1-201ENSMUST00000001147 Syne2Q6ZWQ0 6874 aaKnown RBP3.11□□□□□ -1.91
Col6a1-201ENSMUST00000001147 Gm11938Q9D3H4 131 aa3.09□□□□□ -1.91
Col6a1-201ENSMUST00000001147 Lce3eF8VQJ0 98 aa3.09□□□□□ -1.91
Col6a1-201ENSMUST00000001147 Lce3fQ6PAI4 98 aa3.09□□□□□ -1.91
Col6a1-201ENSMUST00000001147 Mt4P47945 62 aa3.09□□□□□ -1.92
Col6a1-201ENSMUST00000001147 Lce1eQ9D139 143 aa3.07□□□□□ -1.92
Col6a1-201ENSMUST00000001147 ObscnA2AAJ9 8891 aaKnown RBP3.05□□□□□ -1.92
Col6a1-201ENSMUST00000001147 Lce3dE9Q8V1 98 aa3.04□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 81.2 ms