RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	NTA1	P40354	457 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	COQ5	P49017	307 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	TYW3	P53177	273 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	SYH1	Q02875	849 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	SND1	Q04007	877 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	RPC11	Q04307	110 aa	Predicted RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	OPT2	Q06593	877 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	THI21	Q08975	551 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	TMA46	Q12000	345 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	WTM2	Q12206	467 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	IRA2	P19158	3079 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	SPO12	P17123	173 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	AIM26	P32858	118 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	KAP104	P38217	918 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	SWC5	P38326	303 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	AIM14	P53109	570 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	YGL140C	P53120	1219 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	SXM1	Q04175	944 aa	Known RBP	4.82	□□□□□ -1.64
ATM1	YMR301C	RTT10	Q08924	1013 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	NAG1	Q8TGN9	163 aa		4.82	□□□□□ -1.64
ATM1	YMR301C	UBR1	P19812	1950 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	YPK1	P12688	680 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	SNF5	P18480	905 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	TRX1	P22217	103 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	HXT3	P32466	567 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	ADD66	P36040	267 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	ECM2	P38241	364 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	SRP68	P38687	599 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	DLD3	P39976	496 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	KHA1	P40309	873 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	RRT5	P43607	289 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	ASN2	P49090	572 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	YAT1	P80235	687 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	INP2	Q03824	705 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	YPQ2	Q06328	317 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	SAM4	Q08985	325 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	RTK1	Q12100	620 aa	Predicted RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	PEX11	Q12462	236 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	ADE3	P07245	946 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	SST2	P11972	698 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	PHO13	P19881	312 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	SPC110	P32380	944 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	KAR9	P32526	644 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	TYE7	P33122	291 aa	Predicted RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	APM3	P38153	483 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	SMC2	P38989	1170 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	ASG1	P40467	964 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	TRF5	P48561	642 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	COG7	P53195	279 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	SNO2	P53823	222 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	PRM1	P53835	661 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	YPL109C	Q02981	657 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	CIR2	Q08822	631 aa		4.81	□□□□□ -1.64
ATM1	YMR301C	NOP14	Q99207	810 aa	Known RBP	4.81	□□□□□ -1.64
ATM1	YMR301C	TEL1	P38110	2787 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	STE6	P12866	1290 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	MRPL8	P22353	238 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	SFP1	P32432	683 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	YMR124W	P39523	943 aa	Known RBP	4.8	□□□□□ -1.64
ATM1	YMR301C	YEL028W	P39989	153 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	TFG2	P41896	400 aa	Predicted RBP	4.8	□□□□□ -1.64
ATM1	YMR301C	SUM1	P46676	1062 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	VPS75	P53853	264 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	YNL040W	P53960	456 aa	Predicted RBP	4.8	□□□□□ -1.64
ATM1	YMR301C	YDR278C	Q05612	105 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	ATG9	Q12142	997 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	AFI1	Q99222	893 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	Q0182	Q9ZZW1	134 aa		4.8	□□□□□ -1.64
ATM1	YMR301C	COX3	P00420	269 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	FLP1	P03870	423 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	LEU1	P07264	779 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	MIS1	P09440	975 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	BAS1	P22035	811 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	CHL1	P22516	861 aa	Predicted RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	PMT1	P33775	817 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	ARL1	P38116	183 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	RKM3	P38222	552 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	RSP5	P39940	809 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	PAN6	P40459	309 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	RPS10B	P46784	105 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	MNT2	P53059	558 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
ATM1	YMR301C	GRX8	Q05926	109 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	YFT2	Q06676	274 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	SWC7	Q06707	132 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	RPS10A	Q08745	105 aa	Predicted RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	NHA1	Q99271	985 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	IZH4	Q99393	312 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	CLC1	P17891	233 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	HSP60	P19882	572 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	MIH1	P23748	554 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	MCM5	P29496	775 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	PMI40	P29952	429 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	TAE1	P38340	232 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	YHR020W	P38708	688 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	SET5	P38890	526 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	LTP1	P40347	161 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	RAD26	P40352	1085 aa		4.79	□□□□□ -1.64
ATM1	YMR301C	DUG1	P43616	481 aa	Known RBP	4.79	□□□□□ -1.64
ATM1	YMR301C	DLD2	P46681	530 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 141.5 ms