RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	GSH1	P32477	678 aa		3	□□□□□ -1.93
PKR1	YMR123W	RPT3	P33298	428 aa	Known RBP	3	□□□□□ -1.93
PKR1	YMR123W	UBP7	P40453	1071 aa		3	□□□□□ -1.93
PKR1	YMR123W	MAD3	P47074	515 aa		3	□□□□□ -1.93
PKR1	YMR123W	NPA3	P47122	385 aa		3	□□□□□ -1.93
PKR1	YMR123W	ORC5	P50874	479 aa		3	□□□□□ -1.93
PKR1	YMR123W	SCS3	P53012	380 aa		3	□□□□□ -1.93
PKR1	YMR123W	YRB30	P53107	440 aa	Predicted RBP	3	□□□□□ -1.93
PKR1	YMR123W	YPL108W	Q02872	168 aa	Predicted RBP	3	□□□□□ -1.93
PKR1	YMR123W	LEA1	Q08963	238 aa	Predicted RBP	3	□□□□□ -1.93
PKR1	YMR123W	YOL114C	Q12322	202 aa		3	□□□□□ -1.93
PKR1	YMR123W	MPD2	Q99316	277 aa		3	□□□□□ -1.93
PKR1	YMR123W	GAL4	P04386	881 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	BIK1	P11709	440 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	SST2	P11972	698 aa	Known RBP	2.99	□□□□□ -1.93
PKR1	YMR123W	PTC6	P25646	442 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	HES1	P35843	434 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	PXL1	P36166	706 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	ARN1	P38731	627 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	YJL107C	P42947	387 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	TDA9	Q04545	1251 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	GTB1	Q04924	702 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	BRE1	Q07457	700 aa	Known RBP	2.99	□□□□□ -1.93
PKR1	YMR123W	PFA4	Q12006	378 aa		2.99	□□□□□ -1.93
PKR1	YMR123W	CNA1	P23287	553 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	MCM3	P24279	971 aa	Known RBP	2.98	□□□□□ -1.93
PKR1	YMR123W	LAC1	P28496	418 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	YKL133C	P36066	463 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	FLO5	P38894	1075 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	TPA1	P40032	644 aa	Known RBP	2.98	□□□□□ -1.93
PKR1	YMR123W	CAB2	P40506	365 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	STB2	P46679	850 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	TEP1	P53916	434 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	THI3	Q07471	609 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	ICL2	Q12031	575 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	ATX2	Q12067	313 aa		2.98	□□□□□ -1.93
PKR1	YMR123W	SEC18	P18759	758 aa	Known RBP	2.97	□□□□□ -1.93
PKR1	YMR123W	URK1	P27515	501 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	ATO2	P32907	282 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	APM3	P38153	483 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	PHM8	P40025	321 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	CDC1	P40986	491 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	MDV1	P47025	714 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	LYS20	P48570	428 aa	Known RBP	2.97	□□□□□ -1.93
PKR1	YMR123W	IMA1	P53051	589 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	YGR079W	P53249	370 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	LSC1	P53598	329 aa	Known RBP	2.97	□□□□□ -1.93
PKR1	YMR123W	ATG21	Q02887	496 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	NUP53	Q03790	475 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	MLC2	Q06580	163 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	IWR1	Q07532	353 aa	Predicted RBP	2.97	□□□□□ -1.93
PKR1	YMR123W	RRI1	Q12468	440 aa		2.97	□□□□□ -1.93
PKR1	YMR123W	COX1	P00401	534 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	PIF1	P07271	859 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	POL3	P15436	1097 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	RIT1	P23796	513 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	MSS51	P32335	436 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	TOM20	P35180	183 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	FUN12	P39730	1002 aa	Known RBP	2.96	□□□□□ -1.94
PKR1	YMR123W	BUD16	P39988	312 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	MEP2	P41948	499 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	QRI7	P43122	407 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	YPR003C	P53394	754 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	CPR6	P53691	371 aa	Known RBP	2.96	□□□□□ -1.94
PKR1	YMR123W	EAF7	P53911	425 aa	Known RBP	2.96	□□□□□ -1.94
PKR1	YMR123W	MET14	Q02196	202 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	BAG7	Q12128	409 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	UBX3	Q12229	455 aa		2.96	□□□□□ -1.94
PKR1	YMR123W	RVB2	Q12464	471 aa	Known RBP	2.96	□□□□□ -1.94
PKR1	YMR123W	ADE3	P07245	946 aa	Known RBP	2.95	□□□□□ -1.94
PKR1	YMR123W	PET122	P10355	254 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	GND1	P38720	489 aa	Known RBP	2.95	□□□□□ -1.94
PKR1	YMR123W	YIL152W	P40455	235 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	YIR016W	P40572	265 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	UBX6	P47049	396 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	MSY1	P48527	492 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	TAN1	P53072	289 aa	Predicted RBP	2.95	□□□□□ -1.94
PKR1	YMR123W	TAM41	P53230	385 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	SRL1	Q08673	210 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	SUL2	Q12325	893 aa		2.95	□□□□□ -1.94
PKR1	YMR123W	GAL1	P04385	528 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	MSS18	P08593	268 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	MIS1	P09440	975 aa	Known RBP	2.94	□□□□□ -1.94
PKR1	YMR123W	SWI4	P25302	1093 aa	Known RBP	2.94	□□□□□ -1.94
PKR1	YMR123W	PTP2	P29461	750 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	ARP2	P32381	391 aa	Known RBP	2.94	□□□□□ -1.94
PKR1	YMR123W	OCT1	P35999	772 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	SCO2	P38072	301 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	SPC72	P39723	622 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	HIS6	P40545	261 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	DJP1	P40564	432 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	YPT11	P48559	417 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	YNL144C	P53907	740 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	BOP3	P53958	396 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	MOT3	P54785	490 aa	Known RBP	2.94	□□□□□ -1.94
PKR1	YMR123W	MTG1	Q03151	367 aa	Predicted RBP	2.94	□□□□□ -1.94
PKR1	YMR123W	YDR109C	Q04585	715 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	ECM22	Q05958	814 aa	Predicted RBP	2.94	□□□□□ -1.94
PKR1	YMR123W	PDR8	Q06149	701 aa		2.94	□□□□□ -1.94
PKR1	YMR123W	PIG1	Q06216	648 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms