RNA–Protein interactions for RNA: YLR337C

VRP1, Transcript of Verprolin, proline-rich actin-associated protein, yeast

Gene VRP1, Length 2,454 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VRP1	YLR337C	CUL3	P53202	744 aa		6.23	□□□□□ -1.41
VRP1	YLR337C	YNL146W	P53906	100 aa		6.23	□□□□□ -1.41
VRP1	YLR337C	RCF1	Q03713	159 aa		6.23	□□□□□ -1.41
VRP1	YLR337C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
VRP1	YLR337C	SPO12	P17123	173 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	RRP43	P25359	394 aa	Predicted RBP	6.22	□□□□□ -1.41
VRP1	YLR337C	PCH2	P38126	564 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	SKN7	P38889	622 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	YIL108W	P40483	696 aa	Known RBP	6.22	□□□□□ -1.41
VRP1	YLR337C	SHR5	P41912	237 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	PCL10	P53124	433 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	MOT3	P54785	490 aa	Known RBP	6.22	□□□□□ -1.41
VRP1	YLR337C	CIA1	Q05583	330 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	PPR1	P07272	904 aa	Predicted RBP	6.22	□□□□□ -1.41
VRP1	YLR337C	MTF2	P10849	440 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	KSP1	P38691	1029 aa	Known RBP	6.22	□□□□□ -1.41
VRP1	YLR337C	CAJ1	P39101	391 aa		6.22	□□□□□ -1.41
VRP1	YLR337C	CSR1	Q06705	408 aa	Known RBP	6.22	□□□□□ -1.41
VRP1	YLR337C	APL5	Q08951	932 aa	Known RBP	6.22	□□□□□ -1.41
VRP1	YLR337C	GLN4	P13188	809 aa	Known RBP	6.21	□□□□□ -1.41
VRP1	YLR337C	LTV1	P34078	463 aa		6.21	□□□□□ -1.41
VRP1	YLR337C	EXO84	P38261	753 aa		6.21	□□□□□ -1.41
VRP1	YLR337C	SKP2	P42843	763 aa		6.21	□□□□□ -1.41
VRP1	YLR337C	IES1	P43579	692 aa		6.21	□□□□□ -1.41
VRP1	YLR337C	YHM2	Q04013	314 aa		6.21	□□□□□ -1.41
VRP1	YLR337C	ECM7	Q06200	448 aa		6.21	□□□□□ -1.41
VRP1	YLR337C	YPR027C	Q12079	277 aa		6.21	□□□□□ -1.41
VRP1	YLR337C	YKL023W	P36103	277 aa	Known RBP	6.21	□□□□□ -1.42
VRP1	YLR337C	BEM4	P39011	633 aa		6.21	□□□□□ -1.42
VRP1	YLR337C	QRI7	P43122	407 aa		6.21	□□□□□ -1.42
VRP1	YLR337C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	RIP-Chip
VRP1	YLR337C	APT1	P49435	187 aa	Known RBP	6.21	□□□□□ -1.42
VRP1	YLR337C	HSH155	P49955	971 aa	Known RBP	6.21	□□□□□ -1.42
VRP1	YLR337C	ESBP6	P53918	673 aa		6.21	□□□□□ -1.42
VRP1	YLR337C	DAK1	P54838	584 aa	Known RBP	6.21	□□□□□ -1.42
VRP1	YLR337C	MLC2	Q06580	163 aa		6.21	□□□□□ -1.42
VRP1	YLR337C	TSR1	Q07381	788 aa	Known RBP	6.21	□□□□□ -1.42
VRP1	YLR337C	TUP1	P16649	713 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	SKG6	P32900	734 aa	Predicted RBP	6.2	□□□□□ -1.42
VRP1	YLR337C	HIS6	P40545	261 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	ASN1	P49089	572 aa	Known RBP	6.2	□□□□□ -1.42
VRP1	YLR337C	PEX15	Q08215	383 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	SUT2	Q12286	268 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	ATG11	Q12527	1178 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	RTP1	Q12751	981 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	NAT1	P12945	854 aa	Known RBP	6.2	□□□□□ -1.42
VRP1	YLR337C	PET123	P17558	318 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	PRP4	P20053	465 aa	Known RBP	6.2	□□□□□ -1.42
VRP1	YLR337C	MSS51	P32335	436 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	TMT1	P32643	299 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	BCS1	P32839	456 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	FTR1	P40088	404 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	ORC5	P50874	479 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	MEH1	Q02205	184 aa		6.2	□□□□□ -1.42
VRP1	YLR337C	RPS9A	O13516	197 aa	Known RBP	6.19	□□□□□ -1.42
VRP1	YLR337C	WHI2	P12611	486 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	STE14	P32584	239 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	BYE1	P36106	594 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	JNM1	P36224	373 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	VID24	P38263	362 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	CTF8	P38877	133 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	AIM20	P40451	204 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	RPA49	Q01080	415 aa	Predicted RBP	6.19	□□□□□ -1.42
VRP1	YLR337C	YMR187C	Q03236	431 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	PLB2	Q03674	706 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
VRP1	YLR337C	SRB4	P32569	687 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	SWI3	P32591	825 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	PIM1	P36775	1133 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	MMS4	P38257	691 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	EFM4	P40516	257 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	MND2	P40577	368 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	TAF1	P46677	1066 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	SLD3	P53135	668 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	MNP1	P53163	194 aa	Predicted RBP	6.19	□□□□□ -1.42
VRP1	YLR337C	TRS130	Q03660	1102 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	DAS2	Q12084	232 aa		6.19	□□□□□ -1.42
VRP1	YLR337C	ECM29	P38737	1868 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	SNF1	P06782	633 aa	Known RBP	6.18	□□□□□ -1.42
VRP1	YLR337C	DBF20	P32328	564 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	ZRG8	P40021	1076 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	SLU7	Q02775	382 aa	Known RBP	6.18	□□□□□ -1.42
VRP1	YLR337C	VPS60	Q03390	229 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	OMS1	Q06668	471 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	MDM20	Q12387	796 aa	Known RBP	6.18	□□□□□ -1.42
VRP1	YLR337C	PET111	P08468	800 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	HSF1	P10961	833 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	CMP2	P14747	604 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	RAD57	P25301	460 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	HXT1	P32465	570 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	MRX3	P38172	270 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	MED8	P38304	223 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	YFL052W	P43551	465 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	NOP15	P53927	220 aa	Predicted RBP	6.18	□□□□□ -1.42
VRP1	YLR337C	YPS7	Q06325	596 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	VAC14	Q06708	880 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	GIS3	Q12418	502 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	NKP1	Q12493	238 aa		6.18	□□□□□ -1.42
VRP1	YLR337C	CYC1	P00044	109 aa	Predicted RBP	6.17	□□□□□ -1.42
VRP1	YLR337C	RPA135	P22138	1203 aa	Known RBP	6.17	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms