RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	ENT1	Q12518	454 aa		4.15	□□□□□ -1.75
YPT35	YHR105W	MYO4	P32492	1471 aa		4.15	□□□□□ -1.75
YPT35	YHR105W	SEC3	P33332	1336 aa	Known RBP	4.15	□□□□□ -1.75
YPT35	YHR105W	LAM4	P38800	1345 aa		4.15	□□□□□ -1.75
YPT35	YHR105W	SMC4	Q12267	1418 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	ATP2	P00830	511 aa	Known RBP	4.14	□□□□□ -1.75
YPT35	YHR105W	INH1	P01097	85 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	RPL19A	P0CX82	189 aa	Known RBP	4.14	□□□□□ -1.75
YPT35	YHR105W	RPL19B	P0CX83	189 aa	Predicted RBP	4.14	□□□□□ -1.75
YPT35	YHR105W	MIT1	P40002	666 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	NDC80	P40460	691 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	FAF1	P40546	346 aa	Predicted RBP	4.14	□□□□□ -1.75
YPT35	YHR105W	IMO32	P53219	342 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	YSA1	Q01976	231 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	YPL108W	Q02872	168 aa	Predicted RBP	4.14	□□□□□ -1.75
YPT35	YHR105W	YML119W	Q03208	357 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	TMA16	Q08687	178 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	MRH1	Q12117	320 aa	Predicted RBP	4.14	□□□□□ -1.75
YPT35	YHR105W	VCX1	Q99385	411 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	NUP170	P38181	1502 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	BPT1	P14772	1559 aa		4.14	□□□□□ -1.75
YPT35	YHR105W	YML003W	P0CF16	290 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	AMD2	P22580	549 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	ERG8	P24521	451 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	CAB3	P36076	571 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	CCL1	P37366	393 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	YJR061W	P40355	935 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	TSR2	Q06672	205 aa	Known RBP	4.13	□□□□□ -1.75
YPT35	YHR105W	ENT4	Q07872	247 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	IRC10	Q08118	586 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	PSK2	Q08217	1101 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	CIR2	Q08822	631 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	STH1	P32597	1359 aa		4.13	□□□□□ -1.75
YPT35	YHR105W	SCC2	Q04002	1493 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	YLR302C	O13544	120 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	ABF1	P14164	731 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	OLE1	P21147	510 aa	Known RBP	4.12	□□□□□ -1.75
YPT35	YHR105W	YJL206C	P39529	758 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	ARG2	P40360	574 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	DUO1	P53168	247 aa	Known RBP	4.12	□□□□□ -1.75
YPT35	YHR105W	YGR079W	P53249	370 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	ARE2	P53629	642 aa	Known RBP	4.12	□□□□□ -1.75
YPT35	YHR105W	YDR179W-A	Q03983	463 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	RCO1	Q04779	684 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	BMS1	Q08965	1183 aa	Known RBP	4.12	□□□□□ -1.75
YPT35	YHR105W	SUT2	Q12286	268 aa		4.12	□□□□□ -1.75
YPT35	YHR105W	FOB1	O13329	566 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	YPK1	P12688	680 aa	Known RBP	4.11	□□□□□ -1.75
YPT35	YHR105W	GLG1	P36143	616 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	APL3	P38065	1025 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	RKM3	P38222	552 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	IST3	P40565	148 aa	Predicted RBP	4.11	□□□□□ -1.75
YPT35	YHR105W	QRI1	P43123	477 aa	Known RBP	4.11	□□□□□ -1.75
YPT35	YHR105W	CTR1	P49573	406 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	VPS4	P52917	437 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	SPC98	P53540	846 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	BSC5	P53755	489 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	MTG1	Q03151	367 aa	Predicted RBP	4.11	□□□□□ -1.75
YPT35	YHR105W	NGL3	Q03210	505 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	PCL8	Q08966	492 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
YPT35	YHR105W	TAF3	Q12297	353 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	YBR255C-A	Q3E776	120 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	YER175W-A	Q8TGU4	54 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	PAN1	P32521	1480 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	YOR1	P53049	1477 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	YPK9	Q12697	1472 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	SWR1	Q05471	1514 aa		4.11	□□□□□ -1.75
YPT35	YHR105W	RKR1	Q04781	1562 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	CET1	O13297	549 aa	Predicted RBP	4.1	□□□□□ -1.75
YPT35	YHR105W	SUI3	P09064	285 aa	Known RBP	4.1	□□□□□ -1.75
YPT35	YHR105W	KAR3	P17119	729 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	KIN3	P22209	435 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	SGF29	P25554	259 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	CMK1	P27466	446 aa	Known RBP	4.1	□□□□□ -1.75
YPT35	YHR105W	GDA1	P32621	518 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	YBR225W	P38321	900 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	ERC1	P38767	581 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	NPR2	P39923	615 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	PMT6	P42934	759 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	ARC1	P46672	376 aa	Known RBP	4.1	□□□□□ -1.75
YPT35	YHR105W	SRB7	P47822	140 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	PIL1	P53252	339 aa	Known RBP	4.1	□□□□□ -1.75
YPT35	YHR105W	INN1	P53901	409 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	TDA9	Q04545	1251 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	MFB1	Q04922	465 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	GTB1	Q04924	702 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	YPL216W	Q08964	1102 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	ECM5	Q03214	1411 aa		4.1	□□□□□ -1.75
YPT35	YHR105W	YSP3	P25036	478 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	RFA2	P26754	273 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	GCD7	P32502	381 aa	Predicted RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	EMP70	P32802	667 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	MFT1	P33441	392 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	EBP2	P36049	427 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	ALY1	P36117	915 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	YMC2	P38087	329 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	TDP1	P38319	544 aa		4.09	□□□□□ -1.75
YPT35	YHR105W	TPA1	P40032	644 aa	Known RBP	4.09	□□□□□ -1.75
YPT35	YHR105W	IRC6	P43615	237 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms