RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W YLL058WQ12198 575 aa3.62□□□□□ -1.83
BCD1YHR040W OSW2Q12202 724 aa3.62□□□□□ -1.83
BCD1YHR040W CSR2Q12734 1121 aa3.62□□□□□ -1.83
BCD1YHR040W YKL068W-AQ3E826 78 aa3.62□□□□□ -1.83
BCD1YHR040W HKR1P41809 1802 aa3.61□□□□□ -1.83
BCD1YHR040W CDC33P07260 213 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W CUP1-1P0CX80 61 aa3.61□□□□□ -1.83
BCD1YHR040W CUP1-2P0CX81 61 aa3.61□□□□□ -1.83
BCD1YHR040W NAT1P12945 854 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W KIN2P13186 1147 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W GFA1P14742 717 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W RER1P25560 188 aa3.61□□□□□ -1.83
BCD1YHR040W CCR4P31384 837 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W PET309P32522 965 aaPredicted RBP3.61□□□□□ -1.83
BCD1YHR040W GCG1P32656 232 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W SLA2P33338 968 aa3.61□□□□□ -1.83
BCD1YHR040W RCK2P38623 610 aa3.61□□□□□ -1.83
BCD1YHR040W KEL1P38853 1164 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W VPS41P38959 992 aa3.61□□□□□ -1.83
BCD1YHR040W DOT6P40059 670 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W RAD26P40352 1085 aa3.61□□□□□ -1.83
BCD1YHR040W MEP3P53390 489 aa3.61□□□□□ -1.83
BCD1YHR040W TIM8P57744 87 aa3.61□□□□□ -1.83
BCD1YHR040W RPA49Q01080 415 aaPredicted RBP3.61□□□□□ -1.83
BCD1YHR040W PTA1Q01329 785 aaPredicted RBP3.61□□□□□ -1.83
BCD1YHR040W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
BCD1YHR040W BLS1Q06071 122 aa3.61□□□□□ -1.83
BCD1YHR040W SPH1Q06160 661 aa3.61□□□□□ -1.83
BCD1YHR040W CSR1Q06705 408 aaKnown RBP3.61□□□□□ -1.83
BCD1YHR040W CRD1Q07560 283 aa3.61□□□□□ -1.83
BCD1YHR040W ISA1Q07821 250 aaPredicted RBP3.61□□□□□ -1.83
BCD1YHR040W SDH5Q08230 162 aa3.61□□□□□ -1.83
BCD1YHR040W YOL075CQ08234 1294 aa3.61□□□□□ -1.83
BCD1YHR040W YPL216WQ08964 1102 aa3.61□□□□□ -1.83
BCD1YHR040W HFI1Q12060 488 aa3.61□□□□□ -1.83
BCD1YHR040W YOL114CQ12322 202 aa3.61□□□□□ -1.83
BCD1YHR040W PMD1P32634 1753 aa3.61□□□□□ -1.83
BCD1YHR040W BI4P03879 638 aa3.6□□□□□ -1.83
BCD1YHR040W RPS3P05750 240 aaKnown RBP3.6□□□□□ -1.83
BCD1YHR040W PMS1P14242 873 aa3.6□□□□□ -1.83
BCD1YHR040W VMA2P16140 517 aaKnown RBP3.6□□□□□ -1.83
BCD1YHR040W MIH1P23748 554 aa3.6□□□□□ -1.83
BCD1YHR040W SWI3P32591 825 aa3.6□□□□□ -1.83
BCD1YHR040W YME1P32795 747 aa3.6□□□□□ -1.83
BCD1YHR040W COT1P32798 439 aa3.6□□□□□ -1.83
BCD1YHR040W BEM3P32873 1128 aa3.6□□□□□ -1.83
BCD1YHR040W SEG2P34250 1132 aa3.6□□□□□ -1.83
BCD1YHR040W OAF3P36023 863 aa3.6□□□□□ -1.83
BCD1YHR040W MCR1P36060 302 aaKnown RBP3.6□□□□□ -1.83
BCD1YHR040W TVP38P36164 337 aa3.6□□□□□ -1.83
BCD1YHR040W HSL7P38274 827 aa3.6□□□□□ -1.83
BCD1YHR040W TSL1P38427 1098 aaKnown RBP3.6□□□□□ -1.83
BCD1YHR040W HIS2P38635 335 aa3.6□□□□□ -1.83
BCD1YHR040W HXT6P39003 570 aaKnown RBP3.6□□□□□ -1.83
BCD1YHR040W HXT7P39004 570 aa3.6□□□□□ -1.83
BCD1YHR040W NPP2P39997 493 aa3.6□□□□□ -1.83
BCD1YHR040W FTR1P40088 404 aa3.6□□□□□ -1.83
BCD1YHR040W NET1P47035 1189 aa3.6□□□□□ -1.83
BCD1YHR040W SNO2P53823 222 aa3.6□□□□□ -1.83
BCD1YHR040W YML119WQ03208 357 aa3.6□□□□□ -1.83
BCD1YHR040W SXM1Q04175 944 aaKnown RBP3.6□□□□□ -1.83
BCD1YHR040W HLR1Q04429 423 aa3.6□□□□□ -1.83
BCD1YHR040W CIA1Q05583 330 aa3.6□□□□□ -1.83
BCD1YHR040W ECI1Q05871 280 aa3.6□□□□□ -1.83
BCD1YHR040W ECM38Q05902 660 aaPredicted RBP3.6□□□□□ -1.83
BCD1YHR040W SUE1Q06524 206 aa3.6□□□□□ -1.83
BCD1YHR040W SEY1Q99287 776 aa3.6□□□□□ -1.83
BCD1YHR040W TAO3P40468 2376 aa3.59□□□□□ -1.83
BCD1YHR040W YLR462WO13556 202 aa3.59□□□□□ -1.83
BCD1YHR040W RAD1P06777 1100 aa3.59□□□□□ -1.83
BCD1YHR040W ARD1P07347 238 aaPredicted RBP3.59□□□□□ -1.83
BCD1YHR040W SPO16P17122 198 aa3.59□□□□□ -1.83
BCD1YHR040W HOP1P20050 605 aa3.59□□□□□ -1.83
BCD1YHR040W DAL7P21826 554 aa3.59□□□□□ -1.83
BCD1YHR040W GAS1P22146 559 aaKnown RBP3.59□□□□□ -1.83
BCD1YHR040W CDC10P25342 322 aaKnown RBP3.59□□□□□ -1.83
BCD1YHR040W MSH1P25846 959 aa3.59□□□□□ -1.83
BCD1YHR040W DBF4P32325 704 aa3.59□□□□□ -1.83
BCD1YHR040W MUD1P32605 298 aaKnown RBP3.59□□□□□ -1.83
BCD1YHR040W TGL1P34163 548 aa3.59□□□□□ -1.83
BCD1YHR040W YKL050CP35736 922 aa3.59□□□□□ -1.83
BCD1YHR040W YKL151CP36059 337 aa3.59□□□□□ -1.83
BCD1YHR040W LAS1P36146 502 aaPredicted RBP3.59□□□□□ -1.83
BCD1YHR040W STV1P37296 890 aa3.59□□□□□ -1.83
BCD1YHR040W YHL049CP38722 271 aa3.59□□□□□ -1.83
BCD1YHR040W YEL075CP39972 122 aa3.59□□□□□ -1.83
BCD1YHR040W YER189WP40104 122 aa3.59□□□□□ -1.83
BCD1YHR040W YTA12P40341 825 aa3.59□□□□□ -1.83
BCD1YHR040W FAF1P40546 346 aaPredicted RBP3.59□□□□□ -1.83
BCD1YHR040W INA22P40576 216 aa3.59□□□□□ -1.83
BCD1YHR040W ERR3P42222 437 aa3.59□□□□□ -1.83
BCD1YHR040W YFL064CP43540 174 aa3.59□□□□□ -1.83
BCD1YHR040W MIC19P43594 170 aa3.59□□□□□ -1.83
BCD1YHR040W SCD6P45978 349 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
BCD1YHR040W TRS85P46944 698 aa3.59□□□□□ -1.83
BCD1YHR040W ALY2P47029 1046 aa3.59□□□□□ -1.83
BCD1YHR040W BNA1P47096 177 aa3.59□□□□□ -1.83
BCD1YHR040W HXT16P47185 567 aa3.59□□□□□ -1.83
BCD1YHR040W MRPL22P53881 309 aa3.59□□□□□ -1.83
BCD1YHR040W CEG1Q01159 459 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms