RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C MAM33P40513 266 aa6.59□□□□□ -1.35
YPT1YFL038C CCT7P42943 550 aaKnown RBP6.59□□□□□ -1.35
YPT1YFL038C GCV2P49095 1034 aa6.59□□□□□ -1.35
YPT1YFL038C ALT2P52892 507 aa6.59□□□□□ -1.35
YPT1YFL038C COG2P53271 262 aa6.59□□□□□ -1.35
YPT1YFL038C INA17Q02888 182 aa6.59□□□□□ -1.35
YPT1YFL038C RLI1Q03195 608 aaKnown RBP6.59□□□□□ -1.35
YPT1YFL038C ENT4Q07872 247 aa6.59□□□□□ -1.35
YPT1YFL038C SLD7Q08457 257 aa6.59□□□□□ -1.35
YPT1YFL038C DDC1Q08949 612 aa6.59□□□□□ -1.35
YPT1YFL038C GPM2Q12008 311 aa6.59□□□□□ -1.35
YPT1YFL038C APC9Q12107 265 aa6.59□□□□□ -1.35
YPT1YFL038C YPR089WO13585 888 aa6.58□□□□□ -1.36
YPT1YFL038C CCP1P00431 361 aa6.58□□□□□ -1.36
YPT1YFL038C ATP2P00830 511 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C STE6P12866 1290 aa6.58□□□□□ -1.36
YPT1YFL038C HSP26P15992 214 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
YPT1YFL038C HSP78P33416 811 aa6.58□□□□□ -1.36
YPT1YFL038C DRE2P36152 348 aa6.58□□□□□ -1.36
YPT1YFL038C FUI1P38196 639 aa6.58□□□□□ -1.36
YPT1YFL038C YHR182WP38870 785 aa6.58□□□□□ -1.36
YPT1YFL038C SEC31P38968 1273 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C MNN1P39106 762 aa6.58□□□□□ -1.36
YPT1YFL038C YHB1P39676 399 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C MEF2P39677 819 aa6.58□□□□□ -1.36
YPT1YFL038C INP51P40559 946 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C CDC1P40986 491 aa6.58□□□□□ -1.36
YPT1YFL038C SEC27P41811 889 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C RPS10BP46784 105 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C PRO2P54885 456 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C RCR2Q03446 210 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C ENT5Q03769 411 aaKnown RBP6.58□□□□□ -1.36
YPT1YFL038C YMR155WQ03795 547 aa6.58□□□□□ -1.36
YPT1YFL038C ARA2Q04212 335 aa6.58□□□□□ -1.36
YPT1YFL038C RPS10AQ08745 105 aaPredicted RBP6.58□□□□□ -1.36
YPT1YFL038C MCH5Q08777 521 aa6.58□□□□□ -1.36
YPT1YFL038C LDB17Q12342 491 aa6.58□□□□□ -1.36
YPT1YFL038C RGR1P19263 1082 aa6.57□□□□□ -1.36
YPT1YFL038C MSB1P21339 1137 aaKnown RBP6.57□□□□□ -1.36
YPT1YFL038C SSA4P22202 642 aaKnown RBP6.57□□□□□ -1.36
YPT1YFL038C MEF1P25039 761 aa6.57□□□□□ -1.36
YPT1YFL038C YIH1P25637 258 aa6.57□□□□□ -1.36
YPT1YFL038C GCD11P32481 527 aaKnown RBP6.57□□□□□ -1.36
YPT1YFL038C ARN1P38731 627 aa6.57□□□□□ -1.36
YPT1YFL038C RIM4P38741 713 aa6.57□□□□□ -1.36
YPT1YFL038C TGL3P40308 642 aa6.57□□□□□ -1.36
YPT1YFL038C YJR107WP47145 328 aa6.57□□□□□ -1.36
YPT1YFL038C TRF5P48561 642 aaKnown RBP6.57□□□□□ -1.36
YPT1YFL038C MRX6P48564 524 aa6.57□□□□□ -1.36
YPT1YFL038C YGR016WP53209 190 aa6.57□□□□□ -1.36
YPT1YFL038C NRD1P53617 575 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
YPT1YFL038C CUS2P53830 285 aaPredicted RBP6.57□□□□□ -1.36
YPT1YFL038C NHX1Q04121 633 aa6.57□□□□□ -1.36
YPT1YFL038C YET2Q04210 160 aa6.57□□□□□ -1.36
YPT1YFL038C HRD3Q05787 833 aa6.57□□□□□ -1.36
YPT1YFL038C CHS5Q12114 671 aaKnown RBP6.57□□□□□ -1.36
YPT1YFL038C REC8Q12188 680 aa6.57□□□□□ -1.36
YPT1YFL038C ARP7Q12406 477 aa6.57□□□□□ -1.36
YPT1YFL038C LDB19Q12502 818 aa6.57□□□□□ -1.36
YPT1YFL038C TAL1P15019 335 aaKnown RBP6.56□□□□□ -1.36
YPT1YFL038C MET16P18408 261 aaPredicted RBP6.56□□□□□ -1.36
YPT1YFL038C SAN1P22470 610 aa6.56□□□□□ -1.36
YPT1YFL038C PAT1P25644 796 aaKnown RBP6.56□□□□□ -1.36
YPT1YFL038C VPH2P32341 215 aa6.56□□□□□ -1.36
YPT1YFL038C MET4P32389 672 aa6.56□□□□□ -1.36
YPT1YFL038C AEP1P32493 518 aa6.56□□□□□ -1.36
YPT1YFL038C CSE2P33308 149 aa6.56□□□□□ -1.36
YPT1YFL038C YKR078WP36158 585 aaKnown RBP6.56□□□□□ -1.36
YPT1YFL038C YBR259WP38338 688 aa6.56□□□□□ -1.36
YPT1YFL038C SRP68P38687 599 aaKnown RBP6.56□□□□□ -1.36
YPT1YFL038C GGA2P38817 585 aaKnown RBP6.56□□□□□ -1.36
YPT1YFL038C SHU2P38957 223 aa6.56□□□□□ -1.36
YPT1YFL038C FHL1P39521 936 aa6.56□□□□□ -1.36
YPT1YFL038C SEO1P39709 593 aa6.56□□□□□ -1.36
YPT1YFL038C EDC3P39998 551 aaKnown RBP6.56□□□□□ -1.36
YPT1YFL038C ELO3P40319 345 aa6.56□□□□□ -1.36
YPT1YFL038C YJR061WP40355 935 aa6.56□□□□□ -1.36
YPT1YFL038C SET2P46995 733 aaKnown RBP6.56□□□□□ -1.36
YPT1YFL038C TAN1P53072 289 aaPredicted RBP6.56□□□□□ -1.36
YPT1YFL038C NCS6P53088 359 aa6.56□□□□□ -1.36
YPT1YFL038C GND2P53319 492 aa6.56□□□□□ -1.36
YPT1YFL038C SPC98P53540 846 aa6.56□□□□□ -1.36
YPT1YFL038C YTP1P53584 459 aa6.56□□□□□ -1.36
YPT1YFL038C SLM2P53955 656 aa6.56□□□□□ -1.36
YPT1YFL038C INP2Q03824 705 aa6.56□□□□□ -1.36
YPT1YFL038C YKU80Q04437 629 aa6.56□□□□□ -1.36
YPT1YFL038C GLO2Q05584 274 aa6.56□□□□□ -1.36
YPT1YFL038C FAR10Q06001 478 aa6.56□□□□□ -1.36
YPT1YFL038C ATG26Q06321 1198 aa6.56□□□□□ -1.36
YPT1YFL038C PMT7Q06644 662 aa6.56□□□□□ -1.36
YPT1YFL038C SYT1Q06836 1226 aa6.56□□□□□ -1.36
YPT1YFL038C BUD20Q08004 166 aaPredicted RBP6.56□□□□□ -1.36
YPT1YFL038C PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36 RIP-Chip
YPT1YFL038C HSH49Q99181 213 aaPredicted RBP6.56□□□□□ -1.36
YPT1YFL038C HIS1P00498 297 aaKnown RBP6.55□□□□□ -1.36
YPT1YFL038C HAP2P06774 265 aa6.55□□□□□ -1.36
YPT1YFL038C APE1P14904 514 aa6.55□□□□□ -1.36
YPT1YFL038C VPS34P22543 875 aa6.55□□□□□ -1.36
YPT1YFL038C SIS1P25294 352 aaKnown RBP6.55□□□□□ -1.36
YPT1YFL038C ADY2P25613 283 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms