RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W EDE1P34216 1381 aa5.16□□□□□ -1.58
PTC1YDL006W CNE1P27825 502 aa5.15□□□□□ -1.59
PTC1YDL006W MRS6P32864 603 aaKnown RBP5.15□□□□□ -1.59
PTC1YDL006W CCL1P37366 393 aa5.15□□□□□ -1.59
PTC1YDL006W FUI1P38196 639 aa5.15□□□□□ -1.59
PTC1YDL006W SAP185P40856 1058 aa5.15□□□□□ -1.59
PTC1YDL006W YGR021WP53212 290 aa5.15□□□□□ -1.59
PTC1YDL006W SPC98P53540 846 aa5.15□□□□□ -1.59
PTC1YDL006W BUD17P53727 317 aa5.15□□□□□ -1.59
PTC1YDL006W MOT3P54785 490 aaKnown RBP5.15□□□□□ -1.59
PTC1YDL006W VPS64Q03944 604 aa5.15□□□□□ -1.59
PTC1YDL006W YDL073WQ07454 984 aa5.15□□□□□ -1.59
PTC1YDL006W IWR1Q07532 353 aaPredicted RBP5.15□□□□□ -1.59
PTC1YDL006W ALE1Q08548 619 aa5.15□□□□□ -1.59
PTC1YDL006W TGS1Q12052 315 aa5.15□□□□□ -1.59
PTC1YDL006W MRH1Q12117 320 aaPredicted RBP5.15□□□□□ -1.59
PTC1YDL006W YRF1-3P0CX14 1859 aa5.15□□□□□ -1.59
PTC1YDL006W YRF1-7P0CX15 1859 aa5.15□□□□□ -1.59
PTC1YDL006W YRF1-6P53819 1859 aa5.15□□□□□ -1.59
PTC1YDL006W MIS1P09440 975 aaKnown RBP5.14□□□□□ -1.59
PTC1YDL006W GFA1P14742 717 aaKnown RBP5.14□□□□□ -1.59
PTC1YDL006W PIH1P38768 344 aa5.14□□□□□ -1.59
PTC1YDL006W SPC72P39723 622 aa5.14□□□□□ -1.59
PTC1YDL006W FUN12P39730 1002 aaKnown RBP5.14□□□□□ -1.59
PTC1YDL006W STU2P46675 888 aa5.14□□□□□ -1.59
PTC1YDL006W COS12P53053 380 aa5.14□□□□□ -1.59
PTC1YDL006W HOF1Q05080 669 aa5.14□□□□□ -1.59
PTC1YDL006W CTT1P06115 562 aa5.13□□□□□ -1.59
PTC1YDL006W BET2P20133 325 aa5.13□□□□□ -1.59
PTC1YDL006W MCM3P24279 971 aaKnown RBP5.13□□□□□ -1.59
PTC1YDL006W YMC2P38087 329 aa5.13□□□□□ -1.59
PTC1YDL006W SDH8P38345 138 aa5.13□□□□□ -1.59
PTC1YDL006W MUP3P38734 546 aa5.13□□□□□ -1.59
PTC1YDL006W NPR2P39923 615 aa5.13□□□□□ -1.59
PTC1YDL006W MIT1P40002 666 aa5.13□□□□□ -1.59
PTC1YDL006W BUD27P43573 796 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
PTC1YDL006W IMA1P53051 589 aa5.13□□□□□ -1.59
PTC1YDL006W MDG1P53885 366 aa5.13□□□□□ -1.59
PTC1YDL006W ACS1Q01574 713 aa5.13□□□□□ -1.59
PTC1YDL006W ARA2Q04212 335 aa5.13□□□□□ -1.59
PTC1YDL006W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
PTC1YDL006W MDM20Q12387 796 aaKnown RBP5.13□□□□□ -1.59
PTC1YDL006W LYS2P07702 1392 aa5.13□□□□□ -1.59
PTC1YDL006W RPN13O13563 156 aa5.12□□□□□ -1.59
PTC1YDL006W DAL5P15365 543 aa5.12□□□□□ -1.59
PTC1YDL006W POL3P15436 1097 aa5.12□□□□□ -1.59
PTC1YDL006W RPT2P40327 437 aaKnown RBP5.12□□□□□ -1.59
PTC1YDL006W QRI1P43123 477 aaKnown RBP5.12□□□□□ -1.59
PTC1YDL006W IDS2P46958 469 aa5.12□□□□□ -1.59
PTC1YDL006W VPS73P53142 486 aaKnown RBP5.12□□□□□ -1.59
PTC1YDL006W TRS23Q03784 219 aa5.12□□□□□ -1.59
PTC1YDL006W SSP2Q08646 371 aa5.12□□□□□ -1.59
PTC1YDL006W TPK2P06245 380 aa5.11□□□□□ -1.59
PTC1YDL006W BIK1P11709 440 aa5.11□□□□□ -1.59
PTC1YDL006W APA1P16550 321 aaKnown RBP5.11□□□□□ -1.59
PTC1YDL006W SEC18P18759 758 aaKnown RBP5.11□□□□□ -1.59
PTC1YDL006W YCR061WP25639 631 aa5.11□□□□□ -1.59
PTC1YDL006W RPS7AP26786 190 aaKnown RBP5.11□□□□□ -1.59
PTC1YDL006W DBF20P32328 564 aa5.11□□□□□ -1.59
PTC1YDL006W STB5P38699 743 aa5.11□□□□□ -1.59
PTC1YDL006W RAD26P40352 1085 aa5.11□□□□□ -1.59
PTC1YDL006W FAF1P40546 346 aaPredicted RBP5.11□□□□□ -1.59
PTC1YDL006W CPR8P53728 308 aa5.11□□□□□ -1.59
PTC1YDL006W BLS1Q06071 122 aa5.11□□□□□ -1.59
PTC1YDL006W AIM6Q07716 390 aa5.11□□□□□ -1.59
PTC1YDL006W CDC5P32562 705 aa5.1□□□□□ -1.59
PTC1YDL006W YIL166CP40445 542 aa5.1□□□□□ -1.59
PTC1YDL006W CAB2P40506 365 aa5.1□□□□□ -1.59
PTC1YDL006W MRK1P50873 501 aa5.1□□□□□ -1.59
PTC1YDL006W SAP4P53036 818 aa5.1□□□□□ -1.59
PTC1YDL006W COQ6P53318 479 aa5.1□□□□□ -1.59
PTC1YDL006W GFD1Q04839 188 aaKnown RBP5.1□□□□□ -1.59
PTC1YDL006W CIA1Q05583 330 aa5.1□□□□□ -1.59
PTC1YDL006W CRT10Q08226 957 aa5.1□□□□□ -1.59
PTC1YDL006W ZPS1Q12512 249 aa5.1□□□□□ -1.59
PTC1YDL006W AAC1P04710 309 aa5.09□□□□□ -1.59
PTC1YDL006W MTF2P10849 440 aa5.09□□□□□ -1.59
PTC1YDL006W WHI2P12611 486 aa5.09□□□□□ -1.59
PTC1YDL006W MRP7P12687 371 aa5.09□□□□□ -1.59
PTC1YDL006W RIT1P23796 513 aa5.09□□□□□ -1.59
PTC1YDL006W YCL049CP25577 312 aa5.09□□□□□ -1.59
PTC1YDL006W PRE2P30656 287 aaKnown RBP5.09□□□□□ -1.59
PTC1YDL006W NPR3P38742 1146 aa5.09□□□□□ -1.59
PTC1YDL006W FSH1P38777 243 aaKnown RBP5.09□□□□□ -1.59
PTC1YDL006W PUG1P40100 303 aa5.09□□□□□ -1.59
PTC1YDL006W LYS4P49367 693 aaPredicted RBP5.09□□□□□ -1.59
PTC1YDL006W ZDS2P54786 942 aa5.09□□□□□ -1.59
PTC1YDL006W BUG1Q12191 341 aa5.09□□□□□ -1.59
PTC1YDL006W CPA2P03965 1118 aaKnown RBP5.08□□□□□ -1.6
PTC1YDL006W TRX2P22803 104 aaKnown RBP5.08□□□□□ -1.6
PTC1YDL006W XRS2P33301 854 aa5.08□□□□□ -1.6
PTC1YDL006W NUP133P36161 1157 aa5.08□□□□□ -1.6
PTC1YDL006W YPT10P38146 199 aa5.08□□□□□ -1.6
PTC1YDL006W TDP1P38319 544 aa5.08□□□□□ -1.6
PTC1YDL006W YEL020CP39994 560 aa5.08□□□□□ -1.6
PTC1YDL006W YGL117WP53133 265 aa5.08□□□□□ -1.6
PTC1YDL006W ESF2P53743 316 aaKnown RBP5.08□□□□□ -1.6
PTC1YDL006W ATG21Q02887 496 aa5.08□□□□□ -1.6
PTC1YDL006W ADE3P07245 946 aaKnown RBP5.07□□□□□ -1.6
PTC1YDL006W KGD2P19262 463 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms