RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ARP9Q05123 467 aa6.98□□□□□ -1.29
TDP1YBR223C REC8Q12188 680 aa6.98□□□□□ -1.29
TDP1YBR223C COX6P00427 148 aa6.98□□□□□ -1.29
TDP1YBR223C CAR1P00812 333 aaKnown RBP6.98□□□□□ -1.29
TDP1YBR223C INO1P11986 533 aa6.98□□□□□ -1.29
TDP1YBR223C MET16P18408 261 aaPredicted RBP6.98□□□□□ -1.29
TDP1YBR223C ATP12P22135 325 aa6.98□□□□□ -1.29
TDP1YBR223C SEC15P22224 910 aa6.98□□□□□ -1.29
TDP1YBR223C SAN1P22470 610 aa6.98□□□□□ -1.29
TDP1YBR223C DUR3P33413 735 aa6.98□□□□□ -1.29
TDP1YBR223C ASK1P35734 292 aa6.98□□□□□ -1.29
TDP1YBR223C EAP1P36041 632 aaKnown RBP6.98□□□□□ -1.29
TDP1YBR223C AVT3P36062 692 aa6.98□□□□□ -1.29
TDP1YBR223C ATG12P38316 186 aa6.98□□□□□ -1.29
TDP1YBR223C YHR182WP38870 785 aa6.98□□□□□ -1.29
TDP1YBR223C PDS1P40316 373 aaPredicted RBP6.98□□□□□ -1.29
TDP1YBR223C CDC1P40986 491 aa6.98□□□□□ -1.29
TDP1YBR223C GCV2P49095 1034 aa6.98□□□□□ -1.29
TDP1YBR223C PEX21P50091 288 aa6.98□□□□□ -1.29
TDP1YBR223C YMR155WQ03795 547 aa6.98□□□□□ -1.29
TDP1YBR223C CSN9Q03981 162 aa6.98□□□□□ -1.29
TDP1YBR223C ARA2Q04212 335 aa6.98□□□□□ -1.29
TDP1YBR223C JIP5Q06214 492 aaPredicted RBP6.98□□□□□ -1.29
TDP1YBR223C ATG26Q06321 1198 aa6.98□□□□□ -1.29
TDP1YBR223C GPM2Q12008 311 aa6.98□□□□□ -1.29
TDP1YBR223C ARP7Q12406 477 aa6.98□□□□□ -1.29
TDP1YBR223C GAL80P04387 435 aa6.97□□□□□ -1.29
TDP1YBR223C CIT2P08679 460 aa6.97□□□□□ -1.29
TDP1YBR223C APE1P14904 514 aa6.97□□□□□ -1.29
TDP1YBR223C TFC1P32367 649 aa6.97□□□□□ -1.29
TDP1YBR223C MRS6P32864 603 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C BEM3P32873 1128 aa6.97□□□□□ -1.29
TDP1YBR223C YHL026CP38740 315 aa6.97□□□□□ -1.29
TDP1YBR223C RIM4P38741 713 aa6.97□□□□□ -1.29
TDP1YBR223C RAD55P38953 406 aa6.97□□□□□ -1.29
TDP1YBR223C BEM4P39011 633 aa6.97□□□□□ -1.29
TDP1YBR223C ALD5P40047 520 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C SEC28P40509 296 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C CNN1P43618 361 aa6.97□□□□□ -1.29
TDP1YBR223C ROK1P45818 564 aaPredicted RBP6.97□□□□□ -1.29
TDP1YBR223C SET2P46995 733 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C VMA10P48836 114 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C SPC98P53540 846 aa6.97□□□□□ -1.29
TDP1YBR223C YNL011CP53980 444 aa6.97□□□□□ -1.29
TDP1YBR223C PRO2P54885 456 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C REX2P54964 269 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C RCR2Q03446 210 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C NHX1Q04121 633 aa6.97□□□□□ -1.29
TDP1YBR223C YLR225CQ05948 407 aaKnown RBP6.97□□□□□ -1.29
TDP1YBR223C FAR10Q06001 478 aa6.97□□□□□ -1.29
TDP1YBR223C SLD7Q08457 257 aa6.97□□□□□ -1.29
TDP1YBR223C TAL1P15019 335 aaKnown RBP6.96□□□□□ -1.3
TDP1YBR223C HSP26P15992 214 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
TDP1YBR223C MSB1P21339 1137 aaKnown RBP6.96□□□□□ -1.3
TDP1YBR223C ADY2P25613 283 aa6.96□□□□□ -1.3
TDP1YBR223C YIH1P25637 258 aa6.96□□□□□ -1.3
TDP1YBR223C DPH5P32469 300 aaPredicted RBP6.96□□□□□ -1.3
TDP1YBR223C TKL2P33315 681 aa6.96□□□□□ -1.3
TDP1YBR223C SLA2P33338 968 aa6.96□□□□□ -1.3
TDP1YBR223C PDX3P38075 228 aaKnown RBP6.96□□□□□ -1.3
TDP1YBR223C GIP1P38229 639 aa6.96□□□□□ -1.3
TDP1YBR223C LAM1P38851 1228 aa6.96□□□□□ -1.3
TDP1YBR223C TGL3P40308 642 aa6.96□□□□□ -1.3
TDP1YBR223C INP51P40559 946 aaKnown RBP6.96□□□□□ -1.3
TDP1YBR223C TAN1P53072 289 aaPredicted RBP6.96□□□□□ -1.3
TDP1YBR223C NCS6P53088 359 aa6.96□□□□□ -1.3
TDP1YBR223C NRD1P53617 575 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
TDP1YBR223C BRE5P53741 515 aaKnown RBP6.96□□□□□ -1.3
TDP1YBR223C ENT5Q03769 411 aaKnown RBP6.96□□□□□ -1.3
TDP1YBR223C SPG3Q04398 127 aaPredicted RBP6.96□□□□□ -1.3
TDP1YBR223C SPC2Q04969 178 aa6.96□□□□□ -1.3
TDP1YBR223C HRD3Q05787 833 aa6.96□□□□□ -1.3
TDP1YBR223C SEC10Q06245 871 aa6.96□□□□□ -1.3
TDP1YBR223C ASA1Q06822 443 aa6.96□□□□□ -1.3
TDP1YBR223C HIS1P00498 297 aaKnown RBP6.95□□□□□ -1.3
TDP1YBR223C ATP2P00830 511 aaKnown RBP6.95□□□□□ -1.3
TDP1YBR223C NMT1P14743 455 aa6.95□□□□□ -1.3
TDP1YBR223C RPL5P26321 297 aaKnown RBP6.95□□□□□ -1.3
TDP1YBR223C CCR4P31384 837 aaKnown RBP6.95□□□□□ -1.3
TDP1YBR223C VPH2P32341 215 aa6.95□□□□□ -1.3
TDP1YBR223C SRP101P32916 621 aa6.95□□□□□ -1.3
TDP1YBR223C CDC27P38042 758 aa6.95□□□□□ -1.3
TDP1YBR223C SCS2P40075 244 aaKnown RBP6.95□□□□□ -1.3
TDP1YBR223C PRM2P40534 656 aa6.95□□□□□ -1.3
TDP1YBR223C YFL040WP43562 540 aa6.95□□□□□ -1.3
TDP1YBR223C GUF1P46943 645 aa6.95□□□□□ -1.3
TDP1YBR223C YJR107WP47145 328 aa6.95□□□□□ -1.3
TDP1YBR223C AIF1P52923 378 aa6.95□□□□□ -1.3
TDP1YBR223C YTP1P53584 459 aa6.95□□□□□ -1.3
TDP1YBR223C GRX8Q05926 109 aa6.95□□□□□ -1.3
TDP1YBR223C BUD20Q08004 166 aaPredicted RBP6.95□□□□□ -1.3
TDP1YBR223C ESC8Q08119 714 aa6.95□□□□□ -1.3
TDP1YBR223C MCH5Q08777 521 aa6.95□□□□□ -1.3
TDP1YBR223C ICL2Q12031 575 aa6.95□□□□□ -1.3
TDP1YBR223C HSH49Q99181 213 aaPredicted RBP6.95□□□□□ -1.3
TDP1YBR223C CCP1P00431 361 aa6.94□□□□□ -1.3
TDP1YBR223C TUB1P09733 447 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C STE6P12866 1290 aa6.94□□□□□ -1.3
TDP1YBR223C SSA4P22202 642 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C PAT1P25644 796 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 235.4 ms