RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 ERCC5P28715 1186 aaPredicted RBP11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 SPATA20Q8TB22 786 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 ZNF446Q9NWS9 450 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 ZBTB1Q9Y2K1 713 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 RREB1Q92766 1687 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 WNK3Q9BYP7 1800 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 EFCAB8A8MWE9 144 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 UBE2Q2LH0YL09 131 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 FOXN1O15353 648 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 GUCY1A2P33402 732 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 TDO2P48775 406 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 SPECC1LQ69YQ0 1117 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 DZIP3Q86Y13 1208 aaKnown RBP11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 CCDC34Q96HJ3 373 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 RNF26Q9BY78 433 aaPredicted RBP11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 ANAPC4Q9UJX5 808 aa11.6□□□□□ -0.55
SAMMSON-218ENST00000641601 VWA3AA6NCI4 1184 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 PLCD1P51178 756 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 TERF2Q15554 542 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 ZNF654Q8IZM8 581 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 FANCBQ8NB91 859 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 LRRN4CLQ8ND94 238 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 HELBQ8NG08 1087 aaPredicted RBP11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 UBXN4Q92575 508 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 ARGLU1Q9NWB6 273 aaPredicted RBP11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 KCNJ14Q9UNX9 436 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 NFE2L3Q9Y4A8 694 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 PARP3Q9Y6F1 533 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 SLC4A4Q9Y6R1 1079 aa11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 CICQ96RK0 1608 aaPredicted RBP11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
SAMMSON-218ENST00000641601 TADA3O75528 432 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 CLCN6P51797 869 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 FMR1Q06787 632 aaKnown RBP eCLIP11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 ARHGAP29Q52LW3 1261 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 LCORLQ8N3X6 602 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 TC2NQ8N9U0 490 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 MNS1Q8NEH6 495 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 A0A1B0GUL6 1792 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 MYH2Q9UKX2 1941 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 A0A1B0GTH6 734 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 ATP8B1O43520 1251 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 PRKAB2O43741 272 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 BMP15O95972 392 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 GRIN1Q05586 938 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 NR1I3Q14994 352 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 SPECC1Q5M775 1068 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 TAF3Q5VWG9 929 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 ZNF771Q7L3S4 317 aaPredicted RBP11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 SYTL4Q96C24 671 aaPredicted RBP11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 RGS17Q9UGC6 210 aaPredicted RBP11.58□□□□□ -0.56
SAMMSON-218ENST00000641601 DOT1LQ8TEK3 1739 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 FANCGO15287 622 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 URI1O94763 535 aaPredicted RBP11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 ZRANB2O95218 330 aaKnown RBP eCLIP11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 XBP1P17861 261 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 PPARAQ07869 468 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 NR5A1Q13285 461 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 SEC23AQ15436 765 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 RRP12Q5JTH9 1297 aaKnown RBP11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 PANX2Q96RD6 677 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 UBAC1Q9BSL1 405 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 FHOD1Q9Y613 1164 aa11.57□□□□□ -0.56
SAMMSON-218ENST00000641601 TRIM75PA6NK02 468 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 SEMA3EO15041 775 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 CASQ1P31415 396 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 SPATA1Q5VX52 437 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 SUSD4Q5VX71 490 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 SH3RF1Q7Z6J0 888 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 ESR2Q92731 530 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 MED15Q96RN5 788 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 ZKSCAN3Q9BRR0 538 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 NAA15Q9BXJ9 866 aaKnown RBP11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 CSRNP2Q9H175 543 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 TOMM22Q9NS69 142 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 NPHP1O15259 732 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 PRPF3O43395 683 aaKnown RBP11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 PNMA6AP0CW24 399 aaPredicted RBP11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 PCP11498 1178 aaKnown RBP11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 AKAP17AQ02040 695 aaKnown RBP11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 GOLGA8FQ08AF8 430 aa11.56□□□□□ -0.56
SAMMSON-218ENST00000641601 GOLGA8DPQ0D2H9 430 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms