RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ORC4O43929 436 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 NLRP12P59046 1061 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 FUT2Q10981 343 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 GRAPQ13588 217 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 SLC51AQ86UW1 340 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 GRAPLQ8TC17 118 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-211ENST00000641213 TROAPQ12815 778 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 NR5A1Q13285 461 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 RILPL1Q5EBL4 403 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 DNTTIP2Q5QJE6 756 aaKnown RBP19.67■□□□□ 0.74
PHGDH-211ENST00000641213 SPTY2D1Q68D10 685 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-211ENST00000641213 ANKIB1Q9P2G1 1089 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 CDK5RAP2Q96SN8 1893 aa19.67■□□□□ 0.74
PHGDH-211ENST00000641213 BIN1O00499 593 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 PKN1Q16512 942 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 CCDC144BQ3MJ40 725 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 SBK1Q52WX2 424 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 KRI1Q8N9T8 703 aaKnown RBP19.66■□□□□ 0.74
PHGDH-211ENST00000641213 CNBD1Q8NA66 436 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 OXER1Q8TDS5 423 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 SHISA4Q96DD7 197 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 LRRC4BQ9NT99 713 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 PRPF3O43395 683 aaKnown RBP19.66■□□□□ 0.74
PHGDH-211ENST00000641213 CALM1P0DP23 149 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 CALM2P0DP24 149 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 CALM3P0DP25 149 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 AKAP17AQ02040 695 aaKnown RBP19.66■□□□□ 0.74
PHGDH-211ENST00000641213 RBM28Q9NW13 759 aaKnown RBP19.66■□□□□ 0.74
PHGDH-211ENST00000641213 ARPP21Q9UBL0 812 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-211ENST00000641213 TUBE1Q9UJT0 475 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 LEMD3Q9Y2U8 911 aa19.66■□□□□ 0.74
PHGDH-211ENST00000641213 PLEKHA8P1O95397 391 aa19.65■□□□□ 0.74
PHGDH-211ENST00000641213 CYP2D6P10635 497 aa19.65■□□□□ 0.74
PHGDH-211ENST00000641213 LRMPQ12912 555 aa19.65■□□□□ 0.74
PHGDH-211ENST00000641213 MEX3CQ5U5Q3 659 aaKnown RBP19.65■□□□□ 0.74
PHGDH-211ENST00000641213 DZIP1Q86YF9 867 aaKnown RBP19.65■□□□□ 0.74
PHGDH-211ENST00000641213 BAZ2BQ9UIF8 2168 aaKnown RBP19.65■□□□□ 0.74
PHGDH-211ENST00000641213 NAV1Q8NEY1 1877 aa19.65■□□□□ 0.74
PHGDH-211ENST00000641213 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.74
PHGDH-211ENST00000641213 DDAH1O94760 285 aa19.64■□□□□ 0.74
PHGDH-211ENST00000641213 KCNH3Q9ULD8 1083 aa19.64■□□□□ 0.74
PHGDH-211ENST00000641213 PCDHB6Q9Y5E3 794 aa19.64■□□□□ 0.74
PHGDH-211ENST00000641213 NMT2O60551 498 aa19.64■□□□□ 0.73
PHGDH-211ENST00000641213 FAM47AQ5JRC9 791 aa19.64■□□□□ 0.73
PHGDH-211ENST00000641213 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
PHGDH-211ENST00000641213 VPS54Q9P1Q0 977 aa19.64■□□□□ 0.73
PHGDH-211ENST00000641213 FBXO2Q9UK22 296 aaPredicted RBP19.64■□□□□ 0.73
PHGDH-211ENST00000641213 XDHP47989 1333 aa19.64■□□□□ 0.73
PHGDH-211ENST00000641213 XBP1P17861 261 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 PTPREP23469 700 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 LONRF3Q496Y0 759 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 PRR5LQ6MZQ0 368 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 WDR66Q8TBY9 1149 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 PHF20Q9BVI0 1012 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 BCL11BQ9C0K0 894 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-211ENST00000641213 V9GY48 417 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-211ENST00000641213 AFF2P51816 1311 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 hCG_1642624A0A1W2PR95 340 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 LDHBP07195 334 aaKnown RBP19.63■□□□□ 0.73
PHGDH-211ENST00000641213 ADRA2BP18089 450 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 PNOCQ13519 176 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 KRBA2Q6ZNG9 492 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 METTL16Q86W50 562 aaKnown RBP19.63■□□□□ 0.73
PHGDH-211ENST00000641213 SEPT12Q8IYM1 358 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 CACTINQ8WUQ7 758 aaKnown RBP19.63■□□□□ 0.73
PHGDH-211ENST00000641213 CABP5Q9NP86 173 aa19.63■□□□□ 0.73
PHGDH-211ENST00000641213 UQCRHLA0A096LP55 91 aa19.62■□□□□ 0.73
PHGDH-211ENST00000641213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.62■□□□□ 0.73
PHGDH-211ENST00000641213 UQCRHP07919 91 aa19.62■□□□□ 0.73
PHGDH-211ENST00000641213 GRIN1Q05586 938 aa19.62■□□□□ 0.73
PHGDH-211ENST00000641213 PDE4BQ07343 736 aa19.62■□□□□ 0.73
PHGDH-211ENST00000641213 SPECC1Q5M775 1068 aa19.62■□□□□ 0.73
PHGDH-211ENST00000641213 TMTC3Q6ZXV5 915 aa19.62■□□□□ 0.73
PHGDH-211ENST00000641213 MCM9Q9NXL9 1143 aa19.62■□□□□ 0.73
PHGDH-211ENST00000641213 USP17L8P0C7I0 530 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 ISM2Q6H9L7 571 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 MKRN1Q9UHC7 482 aaKnown RBP19.61■□□□□ 0.73
PHGDH-211ENST00000641213 IGSF3O75054 1194 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 NCAPHQ15003 741 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 ZNF804AQ7Z570 1209 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 CNNM3Q8NE01 707 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 CEP131Q9UPN4 1083 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 CNTNAP5Q8WYK1 1306 aa19.61■□□□□ 0.73
PHGDH-211ENST00000641213 FAM205CA6NFA0 338 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 SMTNL1A8MU46 457 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 KRT2P35908 639 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 C15orf52Q6ZUT6 534 aaKnown RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 ELOA2Q8IYF1 753 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 ZNF579Q8NAF0 562 aaKnown RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 CERKQ8TCT0 537 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 RPGRQ92834 1020 aaKnown RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 GPR101Q96P66 508 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 SRPRBQ9Y5M8 271 aaKnown RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 ATP2B1P20020 1258 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 GRIK5Q16478 980 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 C12orf60Q5U649 245 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 LRRC8AQ8IWT6 810 aa19.6■□□□□ 0.73
PHGDH-211ENST00000641213 SRBD1Q8N5C6 995 aaKnown RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 CTCFLQ8NI51 663 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-211ENST00000641213 FAM13BQ9NYF5 915 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms