RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 RGS3P49796 1198 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 EPHB4P54760 987 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 FKBP5Q13451 457 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-226ENST00000640916 RRP1BQ14684 758 aaKnown RBP10.25□□□□□ -0.77
SCARB2-226ENST00000640916 RALBP1Q15311 655 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 CAVIN4Q5BKX8 364 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 MORN1Q5T089 497 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 SH3RF1Q7Z6J0 888 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
SCARB2-226ENST00000640916 NUDT12Q9BQG2 462 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 IDI2Q9BXS1 227 aa10.25□□□□□ -0.77
SCARB2-226ENST00000640916 RYDENQ9NUL5 291 aaKnown RBP10.25□□□□□ -0.77
SCARB2-226ENST00000640916 ARIH1Q9Y4X5 557 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-226ENST00000640916 CHD9Q3L8U1 2897 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 TRIM43BA6NCK2 446 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 GRM8O00222 908 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 ENTPD3O75355 529 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 PDE8BO95263 885 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 ZKSCAN1P17029 563 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-226ENST00000640916 ITGB8P26012 769 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 HMGCS2P54868 508 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 SPP2Q13103 211 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 TWISTNBQ3B726 338 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-226ENST00000640916 Q3C1V9 767 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 TRIM43Q96BQ3 446 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-226ENST00000640916 DDX4Q9NQI0 724 aaKnown RBP10.24□□□□□ -0.77
SCARB2-226ENST00000640916 FLRT1Q9NZU1 646 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 RBPJLQ9UBG7 517 aa10.24□□□□□ -0.77
SCARB2-226ENST00000640916 LRRFIP2Q9Y608 721 aaKnown RBP10.24□□□□□ -0.77
SCARB2-226ENST00000640916 PLXNA1Q9UIW2 1896 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 IGHA2P01877 340 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
SCARB2-226ENST00000640916 SNX17Q15036 470 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 SH3D19Q5HYK7 790 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 SLC39A5Q6ZMH5 540 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 TRMT44Q8IYL2 757 aaKnown RBP10.23□□□□□ -0.77
SCARB2-226ENST00000640916 SOCS4Q8WXH5 440 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 SUCLG2Q96I99 432 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 NECAB3Q96P71 396 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-226ENST00000640916 UHRF1Q96T88 793 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-226ENST00000640916 P2RX7Q99572 595 aaKnown RBP10.23□□□□□ -0.77
SCARB2-226ENST00000640916 PORCNQ9H237 461 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 PDLIM7Q9NR12 457 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 KIF16BQ96L93 1317 aa10.23□□□□□ -0.77
SCARB2-226ENST00000640916 FAM196BA6NMK8 535 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 DNM1LO00429 736 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 PDE3AQ14432 1141 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 WDR43Q15061 677 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCARB2-226ENST00000640916 ZNF280CQ8ND82 737 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 TRPV1Q8NER1 839 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 WDR66Q8TBY9 1149 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 LPAR1Q92633 364 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 ZNF576Q9H609 170 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 PRKAG2Q9UGJ0 569 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 DDX20Q9UHI6 824 aaKnown RBP10.22□□□□□ -0.77
SCARB2-226ENST00000640916 ATP11BQ9Y2G3 1177 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 CHD7Q9P2D1 2997 aa10.22□□□□□ -0.77
SCARB2-226ENST00000640916 SIPA1L1O43166 1804 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 TBC1D12O60347 775 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 PLCG2P16885 1265 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 DNAJB2P25686 324 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 HOXA7P31268 230 aaPredicted RBP10.21□□□□□ -0.77
SCARB2-226ENST00000640916 TRIM60Q495X7 471 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 METTL24Q5JXM2 366 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 GPR142Q7Z601 462 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 GPRC5AQ8NFJ5 357 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 APBA2Q99767 749 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 THEGQ9P2T0 379 aa10.21□□□□□ -0.77
SCARB2-226ENST00000640916 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
SCARB2-226ENST00000640916 GAKO14976 1311 aa10.21□□□□□ -0.78
SCARB2-226ENST00000640916 MYBBP1AQ9BQG0 1328 aaKnown RBP10.21□□□□□ -0.78
SCARB2-226ENST00000640916 BMP1P13497 986 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 MAPK4P31152 587 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 RGS2P41220 211 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 HERVK_113P62684 666 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 MRPS5P82675 430 aaKnown RBP10.2□□□□□ -0.78
SCARB2-226ENST00000640916 PABPC4Q13310 644 aaKnown RBP eCLIP10.2□□□□□ -0.78
SCARB2-226ENST00000640916 ADGRE1Q14246 886 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 RABL6Q3YEC7 729 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-226ENST00000640916 AKNAD1Q5T1N1 836 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 GJC2Q5T442 439 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-226ENST00000640916 ZSCAN29Q8IWY8 852 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-226ENST00000640916 ANKRD44Q8N8A2 993 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 KLHDC4Q8TBB5 520 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 PPM1EQ8WY54 764 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 C1QTNF1Q9BXJ1 281 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 OSBPL5Q9H0X9 879 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-226ENST00000640916 EPHX3Q9H6B9 360 aa10.2□□□□□ -0.78
SCARB2-226ENST00000640916 SMCHD1A6NHR9 2005 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 GBF1Q92538 1859 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 UTYO14607 1347 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 SALL1Q9NSC2 1324 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 VAMP4O75379 141 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 LDHBP07195 334 aaKnown RBP10.19□□□□□ -0.78
SCARB2-226ENST00000640916 NBPF7P0C2Y1 421 aaPredicted RBP10.19□□□□□ -0.78
SCARB2-226ENST00000640916 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 ERVK-24P63145 666 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 JAG1P78504 1218 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms