RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-215ENST00000640055 UBXN2AP68543 259 aa14.03□□□□□ -0.16
PRICKLE1-215ENST00000640055 UBE4AQ14139 1066 aa14.03□□□□□ -0.16
PRICKLE1-215ENST00000640055 TBC1D10BQ4KMP7 808 aaPredicted RBP14.03□□□□□ -0.16
PRICKLE1-215ENST00000640055 CTR9Q6PD62 1173 aa14.03□□□□□ -0.16
PRICKLE1-215ENST00000640055 NBPF11Q86T75 865 aa14.03□□□□□ -0.16
PRICKLE1-215ENST00000640055 COA7Q96BR5 231 aa14.03□□□□□ -0.16
PRICKLE1-215ENST00000640055 CLSTN2Q9H4D0 955 aa14.03□□□□□ -0.16
PRICKLE1-215ENST00000640055 NAT10Q9H0A0 1025 aaKnown RBP14.02□□□□□ -0.16
PRICKLE1-215ENST00000640055 USP40Q9NVE5 1235 aa14.02□□□□□ -0.16
PRICKLE1-215ENST00000640055 NOLC1Q14978 699 aaKnown RBP eCLIP14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 PRDM10Q9NQV6 1147 aa14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 TRIM75PA6NK02 468 aa14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 FCHSD1Q86WN1 690 aa14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 VGLL2Q8N8G2 317 aa14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 LINC00301Q8NCQ3 95 aa14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
PRICKLE1-215ENST00000640055 SHROOM1Q2M3G4 852 aaPredicted RBP14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 IGDCC4Q8TDY8 1250 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 STX1AQ16623 288 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 EYA3Q99504 573 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 HINFPQ9BQA5 517 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 PCDHA5Q9Y5H7 936 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 TXKP42681 527 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 KCNG4Q8TDN1 519 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 NSUN4Q96CB9 384 aaKnown RBP14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 TMEM87BQ96K49 555 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
PRICKLE1-215ENST00000640055 SKILP12757 684 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 CLCN1P35523 988 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 SP4Q02446 784 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 SLC30A10Q6XR72 485 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14□□□□□ -0.17
PRICKLE1-215ENST00000640055 SEC63Q9UGP8 760 aaKnown RBP14□□□□□ -0.17
PRICKLE1-215ENST00000640055 PDE4DIPQ5VU43 2346 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 EARS2Q5JPH6 523 aaKnown RBP14□□□□□ -0.17
PRICKLE1-215ENST00000640055 PRAMEF18Q5VWM3 479 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 NOSTRINQ8IVI9 506 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 CD209Q9NNX6 404 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 GJA3Q9Y6H8 435 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 NAA30Q147X3 362 aaPredicted RBP14□□□□□ -0.17
PRICKLE1-215ENST00000640055 CSRNP2Q9H175 543 aa14□□□□□ -0.17
PRICKLE1-215ENST00000640055 FRMD4AQ9P2Q2 1039 aaPredicted RBP14□□□□□ -0.17
PRICKLE1-215ENST00000640055 ZMYM6O95789 1325 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 CDHR2Q9BYE9 1310 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 UBA7P41226 1012 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 UBASH3AP57075 661 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 PTGDRQ13258 359 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 DYMQ7RTS9 669 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 NRDCO43847 1150 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 VPS72Q15906 364 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 PXDNLA1KZ92 1463 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 KARSQ15046 597 aaKnown RBP13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 C2CD5Q86YS7 1000 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 RBM17Q96I25 401 aaKnown RBP13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 CDK5RAP3Q96JB5 506 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 XPO4Q9C0E2 1151 aaKnown RBP13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 POLLQ9UGP5 575 aa13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 NOL7Q9UMY1 257 aaKnown RBP13.99□□□□□ -0.17
PRICKLE1-215ENST00000640055 KLRF2D3W0D1 207 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 ILDR1Q86SU0 546 aaPredicted RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 KRI1Q8N9T8 703 aaKnown RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 SMARCE1Q969G3 411 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 FANCLQ9NW38 375 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 TNNT1P13805 278 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 GNAT2P19087 354 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 FGFR2P21802 821 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 ARID4AP29374 1257 aaPredicted RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 CHMP4BP1P59074 171 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 VPS16Q9H269 839 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 CCNT1O60563 726 aaKnown RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 GYS1P13807 737 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 KRT2P35908 639 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 PPARDQ03181 441 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 MAEAQ7L5Y9 396 aa13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 LLPHQ9BRT6 129 aaKnown RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 THRAP3Q9Y2W1 955 aaKnown RBP13.98□□□□□ -0.17
PRICKLE1-215ENST00000640055 DEXIO95424 95 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 AOC3Q16853 763 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 RRAGBQ5VZM2 374 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 SPTY2D1Q68D10 685 aaPredicted RBP13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 WASF1Q92558 559 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 TANGO6Q9C0B7 1094 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 TDRD3Q9H7E2 651 aaKnown RBP13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 MMRN2Q9H8L6 949 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 ZBTB21Q9ULJ3 1066 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 LDHCP07864 332 aa13.97□□□□□ -0.17
PRICKLE1-215ENST00000640055 GRAPQ13588 217 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms