RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 DSG2Q14126 1118 aa13.19□□□□□ -0.3
LINC02001-202ENST00000638682 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
LINC02001-202ENST00000638682 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
LINC02001-202ENST00000638682 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
LINC02001-202ENST00000638682 MB21D2Q8IYB1 491 aaPredicted RBP13.19□□□□□ -0.3
LINC02001-202ENST00000638682 DPF2Q92785 391 aa13.19□□□□□ -0.3
LINC02001-202ENST00000638682 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
LINC02001-202ENST00000638682 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
LINC02001-202ENST00000638682 MCM5P33992 734 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 ME3Q16798 604 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 GIMAP6Q6P9H5 292 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 CHST3Q7LGC8 479 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 WDR19Q8NEZ3 1342 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 SHTN1A0MZ66 631 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 PRC1O43663 620 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 BAG3O95817 575 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 PPP4CP60510 307 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 AGBL3Q8NEM8 1001 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 TRPM4Q8TD43 1214 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 BRF1Q92994 677 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 SUGT1Q9Y2Z0 365 aa13.18□□□□□ -0.3
LINC02001-202ENST00000638682 NEDD4P46934 1319 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 DDX60LQ5H9U9 1706 aaKnown RBP13.17□□□□□ -0.3
LINC02001-202ENST00000638682 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 APLP1P51693 650 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 PPARAQ07869 468 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 AKNAD1Q5T1N1 836 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 STRIP1Q5VSL9 837 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 MAP1SQ66K74 1059 aaPredicted RBP13.17□□□□□ -0.3
LINC02001-202ENST00000638682 CERS5Q8N5B7 392 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
LINC02001-202ENST00000638682 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 ATP8A2Q9NTI2 1148 aa13.17□□□□□ -0.3
LINC02001-202ENST00000638682 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
LINC02001-202ENST00000638682 GAKO14976 1311 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 B4E1Z4 1266 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 BTDP43251 543 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 ANTXR2P58335 489 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 NUCB2P80303 420 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 ST3GAL1Q11201 340 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
LINC02001-202ENST00000638682 DACT2Q5SW24 774 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 MFSD6Q6ZSS7 791 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 STAG1Q8WVM7 1258 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 MXD3Q9BW11 206 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 KRT23Q9C075 422 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
LINC02001-202ENST00000638682 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 ANAPC4Q9UJX5 808 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
LINC02001-202ENST00000638682 MYH8P13535 1937 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 GPR75-ASB3A0A0A6YYF3 556 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 USP5P45974 858 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 STK3Q13188 491 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 NBR1Q14596 966 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 NFKBIBQ15653 356 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 SAMD7Q7Z3H4 446 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
LINC02001-202ENST00000638682 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
LINC02001-202ENST00000638682 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 USP17L21D6R901 530 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 F8W031 263 aaPredicted RBP13.14□□□□□ -0.31
LINC02001-202ENST00000638682 USP17L8P0C7I0 530 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 FKBP1AP62942 108 aaKnown RBP13.14□□□□□ -0.31
LINC02001-202ENST00000638682 RBM26Q5T8P6 1007 aaKnown RBP13.14□□□□□ -0.31
LINC02001-202ENST00000638682 STK11IPQ8N1F8 1099 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 OGFOD1Q8N543 542 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 GMLQ99445 158 aa13.14□□□□□ -0.31
LINC02001-202ENST00000638682 TTF2Q9UNY4 1162 aaKnown RBP13.14□□□□□ -0.31
LINC02001-202ENST00000638682 PFKFB2O60825 505 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 KDM4AO75164 1064 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 EGFRP00533 1210 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 ZNF280AP59817 542 aaPredicted RBP13.13□□□□□ -0.31
LINC02001-202ENST00000638682 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 RRP12Q5JTH9 1297 aaKnown RBP13.13□□□□□ -0.31
LINC02001-202ENST00000638682 TEX11Q8IYF3 940 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 TNPO1Q92973 898 aaKnown RBP13.13□□□□□ -0.31
LINC02001-202ENST00000638682 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
LINC02001-202ENST00000638682 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
LINC02001-202ENST00000638682 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 SMIM22K7EJ46 135 aa13.13□□□□□ -0.31
LINC02001-202ENST00000638682 SH2B2O14492 632 aaPredicted RBP13.13□□□□□ -0.31
LINC02001-202ENST00000638682 CYP2D6P10635 497 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms