RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 DGKZQ13574 1117 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 AKAP4Q5JQC9 854 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 FAM182BQ5T319 152 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 PCNX4Q63HM2 1172 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 SVIPQ8NHG7 77 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 CCDC8Q9H0W5 538 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-209ENST00000638409 TNKS2Q9H2K2 1166 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 AS3MTQ9HBK9 375 aa9.44□□□□□ -0.9
SCARB2-209ENST00000638409 TBX3O15119 743 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 FBXO24O75426 580 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 RAPGEF1Q13905 1077 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
SCARB2-209ENST00000638409 PPM1EQ8WY54 764 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 UNC93B1Q9H1C4 597 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 EP400Q96L91 3159 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 DOT1LQ8TEK3 1739 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 TOGARAM1Q9Y4F4 1720 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 PDE8AO60658 829 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-209ENST00000638409 WDR43Q15061 677 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCARB2-209ENST00000638409 AGERQ15109 404 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 TM4SF20Q53R12 229 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 MYRIPQ8NFW9 859 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 RTFDC1Q9BY42 306 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-209ENST00000638409 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 ETNK1Q9HBU6 452 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 RGPD3A6NKT7 1758 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-209ENST00000638409 RGPD4Q7Z3J3 1758 aa9.43□□□□□ -0.9
SCARB2-209ENST00000638409 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
SCARB2-209ENST00000638409 GRAMD1BQ3KR37 738 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
SCARB2-209ENST00000638409 ZNF530Q6P9A1 599 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-209ENST00000638409 SLC10A4Q96EP9 437 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 DCAF5Q96JK2 942 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 ZHX3Q9H4I2 956 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARB2-209ENST00000638409 SCN11AQ9UI33 1791 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 IL31Q6EBC2 164 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 PCGF5Q86SE9 256 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 THAP3Q8WTV1 239 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-209ENST00000638409 CEP63Q96MT8 703 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
SCARB2-209ENST00000638409 ITGB4P16144 1822 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 ERVV-2B6SEH9 535 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 RASGRP1O95267 797 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 MAP3K10Q02779 954 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 C1orf141Q5JVX7 400 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 ERAP2Q6P179 960 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 C1orf131Q8NDD1 294 aaKnown RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 VIRMAQ69YN4 1812 aaKnown RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 KDM6AO15550 1401 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 HTATSF1O43719 755 aaKnown RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 POLR3DP05423 398 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 TRAPPC10P48553 1259 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 MYBPC2Q14324 1141 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 NIM1KQ8IY84 436 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 B2RBV5 119 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 ALG1L2C9J202 215 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 LDHCP07864 332 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 LIG1P18858 919 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 MCCP23508 829 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 MTMR1Q13613 665 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 SIM2Q14190 667 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 RNF180Q86T96 592 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 MYO19Q96H55 970 aa9.41□□□□□ -0.9
SCARB2-209ENST00000638409 SCHIP1Q9P0W5 487 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-209ENST00000638409 MRC1P22897 1456 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 MAP3K5Q99683 1374 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 BTAF1O14981 1849 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 DYTNA2CJ06 578 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 INHAP05111 366 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 NEFMP07197 916 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 NEK3P51956 506 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 CCDC85BQ15834 202 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-209ENST00000638409 PRPF40BQ6NWY9 871 aaKnown RBP9.4□□□□□ -0.9
SCARB2-209ENST00000638409 PDILTQ8N807 584 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 TMEM74Q96NL1 305 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 PLAAQ9Y263 795 aa9.4□□□□□ -0.9
SCARB2-209ENST00000638409 GNAT3A8MTJ3 354 aa9.4□□□□□ -0.91
SCARB2-209ENST00000638409 PLSCR1O15162 318 aa9.4□□□□□ -0.91
SCARB2-209ENST00000638409 NEK2P51955 445 aa9.4□□□□□ -0.91
SCARB2-209ENST00000638409 APOBRQ0VD83 1088 aa9.4□□□□□ -0.91
SCARB2-209ENST00000638409 LINC01559Q495D7 138 aa9.4□□□□□ -0.91
SCARB2-209ENST00000638409 STRA8Q7Z7C7 330 aa9.4□□□□□ -0.91
SCARB2-209ENST00000638409 RSRP1Q9BUV0 290 aa9.4□□□□□ -0.91
SCARB2-209ENST00000638409 DLG5Q8TDM6 1919 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 BACH1O14867 736 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 LHFPL2Q6ZUX7 228 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 ATL2Q8NHH9 583 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 MFSD3Q96ES6 412 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 OSBPL3Q9H4L5 887 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms