RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 TRIM50Q86XT4 487 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 C2orf69Q8N8R5 385 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 THAP11Q96EK4 314 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 ZNF512BQ96KM6 892 aaPredicted RBP4.85□□□□□ -1.63
CLN5-214ENST00000636705 FAM129BQ96TA1 746 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 MCOLN1Q9GZU1 580 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 ZNF277Q9NRM2 450 aaPredicted RBP4.85□□□□□ -1.63
CLN5-214ENST00000636705 PGAP2Q9UHJ9 254 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 TCEAL9Q9UHQ7 104 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 PRKAB1Q9Y478 270 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 MRVI1Q9Y6F6 885 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 GJA3Q9Y6H8 435 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 KIF20BQ96Q89 1820 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 MRC1P22897 1456 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 ESYT3A0FGR9 886 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 ZBTB24O43167 697 aaPredicted RBP4.84□□□□□ -1.63
CLN5-214ENST00000636705 LDHAP00338 332 aaKnown RBP4.84□□□□□ -1.63
CLN5-214ENST00000636705 GNA15P30679 374 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 ETFBP38117 255 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 COPS2P61201 443 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 FKBP1BP68106 108 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 LRRC41Q15345 812 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 MTHFSDQ2M296 383 aaKnown RBP4.84□□□□□ -1.63
CLN5-214ENST00000636705 TKFCQ3LXA3 575 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 OXLD1Q5BKU9 147 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 KIF6Q6ZMV9 814 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 SAPCD2Q86UD0 394 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 ZNF496Q96IT1 587 aaPredicted RBP4.84□□□□□ -1.63
CLN5-214ENST00000636705 NLRP3Q96P20 1036 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 ZNRF3Q9ULT6 936 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 PCDHB9Q9Y5E1 797 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 COL5A3P25940 1745 aaPredicted RBP4.84□□□□□ -1.63
CLN5-214ENST00000636705 SCN4AP35499 1836 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 IBTKQ9P2D0 1353 aaPredicted RBP4.84□□□□□ -1.63
CLN5-214ENST00000636705 BRCA1P38398 1863 aaKnown RBP4.84□□□□□ -1.63
CLN5-214ENST00000636705 RGPD2P0DJD1 1756 aa4.84□□□□□ -1.63
CLN5-214ENST00000636705 CELF2O95319 508 aaKnown RBP4.84□□□□□ -1.64
CLN5-214ENST00000636705 ADH1BP00325 375 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 RPS12P25398 132 aaKnown RBP4.84□□□□□ -1.64
CLN5-214ENST00000636705 EIF1AXP47813 144 aaKnown RBP4.84□□□□□ -1.64
CLN5-214ENST00000636705 DHX8Q14562 1220 aaKnown RBP4.84□□□□□ -1.64
CLN5-214ENST00000636705 CRY2Q49AN0 593 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 HSP90AB3PQ58FF7 597 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 VPS37DQ86XT2 251 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 LILRB2Q8N423 598 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 PRPF38AQ8NAV1 312 aaKnown RBP4.84□□□□□ -1.64
CLN5-214ENST00000636705 NIF3L1Q9GZT8 377 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 TYW1Q9NV66 732 aaKnown RBP4.84□□□□□ -1.64
CLN5-214ENST00000636705 GGT7Q9UJ14 662 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 PCDHGA11Q9Y5H2 935 aa4.84□□□□□ -1.64
CLN5-214ENST00000636705 NRXN2Q9P2S2 1712 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 PPP1R12AO14974 1030 aaPredicted RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 MASP1P48740 699 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 LMOD3Q0VAK6 560 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 MAP7D1Q3KQU3 841 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 MSS51Q4VC12 460 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 MEI1Q5TIA1 1274 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 CIAPIN1Q6FI81 312 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 CYP4F22Q6NT55 531 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 DPF2Q92785 391 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 COPRSQ9NQ92 184 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 GPRC5DQ9NZD1 345 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 PLA2G2EQ9NZK7 142 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 CNTN3Q9P232 1028 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 SFMBT1Q9UHJ3 866 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 V9GY48 417 aaPredicted RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 ERBB4Q15303 1308 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 RIC1Q4ADV7 1423 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 PPIP5K2O43314 1243 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 VIL1P09327 827 aaKnown RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 USP5P45974 858 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 CHMP4BP1P59074 171 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 PTPN12Q05209 780 aaKnown RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 GRM1Q13255 1194 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 OS9Q13438 667 aaPredicted RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 ARHGEF6Q15052 776 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 FAM26DQ5JW98 314 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 RGMBQ6NW40 437 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 LYPD8Q6UX82 237 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 HS2ST1Q7LGA3 356 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 CTU1Q7Z7A3 348 aaKnown RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 KIAA0907Q7Z7F0 614 aaPredicted RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 RETREG3Q86VR2 466 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 DCPSQ96C86 337 aaKnown RBP4.83□□□□□ -1.64
CLN5-214ENST00000636705 GPRASP2Q96D09 838 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 FRMD6Q96NE9 622 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 DEPDC7Q96QD5 511 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 EYA3Q99504 573 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 SPSB2Q99619 263 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 ZNF541Q9H0D2 1346 aa4.83□□□□□ -1.64
CLN5-214ENST00000636705 PPEF1O14829 653 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 A1BGP04217 495 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 ATP2B2Q01814 1243 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 INTS3Q68E01 1043 aaKnown RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 ANKS3Q6ZW76 656 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 ATCAYQ86WG3 371 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 SP8Q8IXZ3 490 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 HNRNPLLQ8WVV9 542 aaKnown RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 ZNF516Q92618 1163 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 MKL1Q969V6 931 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms