RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 NKX2-3Q8TAU0 364 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 ACER1Q8TDN7 264 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 TBC1D22AQ8WUA7 517 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 TGFBRAP1Q8WUH2 860 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 TRIB2Q92519 343 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 CHMP4CQ96CF2 233 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 DYNLL2Q96FJ2 89 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 FAM163AQ96GL9 167 aaPredicted RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 DEFB118Q96PH6 123 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 P2RX7Q99572 595 aaKnown RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 IDI2Q9BXS1 227 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 CHMP4AQ9BY43 222 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 API5Q9BZZ5 524 aaKnown RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 OSBPL5Q9H0X9 879 aaPredicted RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 ASCC2Q9H1I8 757 aaPredicted RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 PORCNQ9H237 461 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 PRO3102Q9H379 93 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 EMILIN3Q9NT22 766 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 FLRT1Q9NZU1 646 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 RAI14Q9P0K7 980 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 RBM27Q9P2N5 1060 aaKnown RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 RBPJLQ9UBG7 517 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 STAP2Q9UGK3 403 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 SRRDQ9UH36 339 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 GJD2Q9UKL4 321 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 DENND2AQ9ULE3 1009 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 TACC3Q9Y6A5 838 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 DDX49Q9Y6V7 483 aaKnown RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 FPGT-TNNI3KV9GXZ4 949 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 TTC3P53804 2025 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 COL2A1P02458 1487 aaPredicted RBP1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 BDP1A6H8Y1 2624 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 RALGAPA2Q2PPJ7 1873 aa1.99□□□□□ -2.09
SYNGAP1-216ENST00000636640 ARID2Q68CP9 1835 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 PRRC2BQ5JSZ5 2229 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 LAMA3Q16787 3333 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 PFASO15067 1338 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 MAST3O60307 1309 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 FLT1P17948 1338 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 PDS5AQ29RF7 1337 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TCRBV5S4A2TA0A5A2 114 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CCER2I3L3R5 266 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CXCL11O14625 94 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SEMA3EO15041 775 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TBC1D12O60347 775 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CTNND1O60716 968 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SGPL1O95470 568 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 MAP4K4O95819 1239 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 GH2P01242 217 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 GNAI2P04899 355 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 GJB1P08034 283 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 GNAI3P08754 354 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TAL1P17542 331 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SYN1P17600 705 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CYP2B6P20813 491 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CYP7A1P22680 504 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CCND3P30281 292 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SHMT1P34896 483 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 GJA8P48165 433 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 PPP4CP60510 307 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CACNB2Q08289 660 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 G3BP1Q13283 466 aaKnown RBP eCLIP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 MTMR2Q13614 643 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SEPT2Q15019 361 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SH3D19Q5HYK7 790 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TTC39AQ5SRH9 613 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 PRAMEF19Q5SWL8 479 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TMEM63BQ5T3F8 832 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 GORABQ5T7V8 394 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 ANO1Q5XXA6 986 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZKSCAN2Q63HK3 967 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TSHZ3Q63HK5 1081 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 DCAF15Q66K64 600 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 OTUD7BQ6GQQ9 843 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 NAA16Q6N069 864 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 Q7L0L9 218 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 RASGRP2Q7LDG7 609 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 METTL16Q86W50 562 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 STK11IPQ8N1F8 1099 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 LCORLQ8N3X6 602 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 MAGEB6Q8N7X4 407 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 RAET1EQ8TD07 263 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 OTUD7AQ8TE49 926 aaPredicted RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 U2AF1L4Q8WU68 220 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SDR42E1Q8WUS8 393 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 ARHGAP45Q92619 1136 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 USP6NLQ92738 828 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 DPF3Q92784 378 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 PAWRQ96IZ0 340 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 SEC62Q99442 399 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 RIOK1Q9BRS2 568 aaKnown RBP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 PAGR1Q9BTK6 254 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 TMEM106CQ9BVX2 250 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 CRISPLD2Q9H0B8 497 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 RNF208Q9H0X6 261 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 ARMT1Q9H993 441 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 INCENPQ9NQS7 918 aa1.98□□□□□ -2.09
SYNGAP1-216ENST00000636640 FBXO28Q9NVF7 368 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms