RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 NAV1Q8NEY1 1877 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 MYH7P12883 1935 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 ADCY3O60266 1144 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 ATP5JP18859 108 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 USP5P45974 858 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 SLC9C2Q5TAH2 1124 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 UBE2Q1Q7Z7E8 422 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 TRIM34Q9BYJ4 488 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 PAG1Q9NWQ8 432 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 SAP30BPQ9UHR5 308 aaKnown RBP22.28■■□□□ 1.16
CLN6-214ENST00000636314 AFG3L2Q9Y4W6 797 aa22.28■■□□□ 1.16
CLN6-214ENST00000636314 HLA-DOAP06340 250 aa22.27■■□□□ 1.16
CLN6-214ENST00000636314 PDE6AP16499 860 aa22.27■■□□□ 1.16
CLN6-214ENST00000636314 CRACR2BQ8N4Y2 399 aaPredicted RBP22.27■■□□□ 1.16
CLN6-214ENST00000636314 SMCR8Q8TEV9 937 aaPredicted RBP22.27■■□□□ 1.16
CLN6-214ENST00000636314 EDC3Q96F86 508 aaKnown RBP22.27■■□□□ 1.16
CLN6-214ENST00000636314 DCTPP1Q9H773 170 aa22.27■■□□□ 1.16
CLN6-214ENST00000636314 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.27■■□□□ 1.16
CLN6-214ENST00000636314 PALD1Q9ULE6 856 aa22.27■■□□□ 1.16
CLN6-214ENST00000636314 NR2E3Q9Y5X4 410 aa22.27■■□□□ 1.16
CLN6-214ENST00000636314 DDX60LQ5H9U9 1706 aaKnown RBP22.26■■□□□ 1.15
CLN6-214ENST00000636314 TRIM75PA6NK02 468 aa22.26■■□□□ 1.15
CLN6-214ENST00000636314 TNPO2O14787 897 aaKnown RBP22.26■■□□□ 1.15
CLN6-214ENST00000636314 ELNP15502 786 aa22.26■■□□□ 1.15
CLN6-214ENST00000636314 FLT3LGP49771 235 aa22.26■■□□□ 1.15
CLN6-214ENST00000636314 CCDC84Q86UT8 332 aaPredicted RBP22.26■■□□□ 1.15
CLN6-214ENST00000636314 HAUS7Q99871 368 aa22.26■■□□□ 1.15
CLN6-214ENST00000636314 TAOK2Q9UL54 1235 aa22.26■■□□□ 1.15
CLN6-214ENST00000636314 SLC45A1Q9Y2W3 748 aa22.26■■□□□ 1.15
CLN6-214ENST00000636314 MAGEB6P1A0A0J9YX57 407 aa22.25■■□□□ 1.15
CLN6-214ENST00000636314 SGPL1O95470 568 aa22.25■■□□□ 1.15
CLN6-214ENST00000636314 INHAP05111 366 aa22.25■■□□□ 1.15
CLN6-214ENST00000636314 CAP2P40123 477 aa22.25■■□□□ 1.15
CLN6-214ENST00000636314 PCDHB15Q9Y5E8 787 aa22.25■■□□□ 1.15
CLN6-214ENST00000636314 ZNF532Q9HCE3 1301 aa22.25■■□□□ 1.15
CLN6-214ENST00000636314 RANBP2P49792 3224 aaKnown RBP22.24■■□□□ 1.15
CLN6-214ENST00000636314 ALPK3Q96L96 1907 aa22.24■■□□□ 1.15
CLN6-214ENST00000636314 FOXP4Q8IVH2 680 aaPredicted RBP22.24■■□□□ 1.15
CLN6-214ENST00000636314 GPATCH3Q96I76 525 aa22.24■■□□□ 1.15
CLN6-214ENST00000636314 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
CLN6-214ENST00000636314 RIOK1Q9BRS2 568 aaKnown RBP22.24■■□□□ 1.15
CLN6-214ENST00000636314 DNAJC18Q9H819 358 aa22.24■■□□□ 1.15
CLN6-214ENST00000636314 LOC285556D6RIA3 1793 aa22.23■■□□□ 1.15
CLN6-214ENST00000636314 TFRCP02786 760 aaKnown RBP22.23■■□□□ 1.15
CLN6-214ENST00000636314 RRP1BQ14684 758 aaKnown RBP22.23■■□□□ 1.15
CLN6-214ENST00000636314 TBC1D2Q9BYX2 928 aa22.23■■□□□ 1.15
CLN6-214ENST00000636314 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.23■■□□□ 1.15
CLN6-214ENST00000636314 ECHDC1Q9NTX5 307 aa22.23■■□□□ 1.15
CLN6-214ENST00000636314 TCRBV5S4A2TA0A5A2 114 aa22.22■■□□□ 1.15
CLN6-214ENST00000636314 METTL16Q86W50 562 aaKnown RBP22.22■■□□□ 1.15
CLN6-214ENST00000636314 ANKRD13CQ8N6S4 541 aa22.22■■□□□ 1.15
CLN6-214ENST00000636314 PXYLP1Q8TE99 480 aa22.22■■□□□ 1.15
CLN6-214ENST00000636314 DEFB118Q96PH6 123 aa22.22■■□□□ 1.15
CLN6-214ENST00000636314 CRNKL1Q9BZJ0 848 aaKnown RBP22.22■■□□□ 1.15
CLN6-214ENST00000636314 AGTPBP1Q9UPW5 1226 aa22.22■■□□□ 1.15
CLN6-214ENST00000636314 EVI5O60447 810 aa22.21■■□□□ 1.15
CLN6-214ENST00000636314 ADD2P35612 726 aa22.21■■□□□ 1.15
CLN6-214ENST00000636314 IRF5Q13568 498 aa22.21■■□□□ 1.15
CLN6-214ENST00000636314 ZNF280CQ8ND82 737 aa22.21■■□□□ 1.15
CLN6-214ENST00000636314 COA7Q96BR5 231 aa22.21■■□□□ 1.15
CLN6-214ENST00000636314 AS3MTQ9HBK9 375 aa22.21■■□□□ 1.15
CLN6-214ENST00000636314 PNMA3Q9UL41 463 aa22.21■■□□□ 1.15
CLN6-214ENST00000636314 USP17L5A8MUK1 530 aa22.2■■□□□ 1.14
CLN6-214ENST00000636314 ASNSP08243 561 aa22.2■■□□□ 1.14
CLN6-214ENST00000636314 SPP2Q13103 211 aa22.2■■□□□ 1.14
CLN6-214ENST00000636314 TREML2Q5T2D2 321 aa22.2■■□□□ 1.14
CLN6-214ENST00000636314 TTC6Q86TZ1 520 aa22.2■■□□□ 1.14
CLN6-214ENST00000636314 GDF11O95390 407 aa22.19■■□□□ 1.14
CLN6-214ENST00000636314 LCORLQ8N3X6 602 aa22.19■■□□□ 1.14
CLN6-214ENST00000636314 EHD4Q9H223 541 aa22.19■■□□□ 1.14
CLN6-214ENST00000636314 PRO3102Q9H379 93 aa22.19■■□□□ 1.14
CLN6-214ENST00000636314 SERPINB13Q9UIV8 391 aa22.19■■□□□ 1.14
CLN6-214ENST00000636314 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
CLN6-214ENST00000636314 PROCA1Q8NCQ7 364 aaPredicted RBP22.18■■□□□ 1.14
CLN6-214ENST00000636314 GINM1Q9NU53 330 aa22.18■■□□□ 1.14
CLN6-214ENST00000636314 ZBTB21Q9ULJ3 1066 aa22.18■■□□□ 1.14
CLN6-214ENST00000636314 MBD4O95243 580 aa22.17■■□□□ 1.14
CLN6-214ENST00000636314 POLR3DP05423 398 aaPredicted RBP22.17■■□□□ 1.14
CLN6-214ENST00000636314 CAPN2P17655 700 aa22.17■■□□□ 1.14
CLN6-214ENST00000636314 HMGCS2P54868 508 aa22.17■■□□□ 1.14
CLN6-214ENST00000636314 FAM110CQ1W6H9 321 aa22.17■■□□□ 1.14
CLN6-214ENST00000636314 TSHZ3Q63HK5 1081 aa22.17■■□□□ 1.14
CLN6-214ENST00000636314 SDR42E1Q8WUS8 393 aa22.17■■□□□ 1.14
CLN6-214ENST00000636314 ARMT1Q9H993 441 aa22.17■■□□□ 1.14
CLN6-214ENST00000636314 PAK6Q9NQU5 681 aaPredicted RBP22.17■■□□□ 1.14
CLN6-214ENST00000636314 UBE3CQ15386 1083 aa22.16■■□□□ 1.14
CLN6-214ENST00000636314 SLFNL1Q499Z3 407 aa22.16■■□□□ 1.14
CLN6-214ENST00000636314 PAWRQ96IZ0 340 aaKnown RBP22.16■■□□□ 1.14
CLN6-214ENST00000636314 MCM9Q9NXL9 1143 aa22.16■■□□□ 1.14
CLN6-214ENST00000636314 BAZ2AQ9UIF9 1905 aaKnown RBP22.16■■□□□ 1.14
CLN6-214ENST00000636314 JAG1P78504 1218 aa22.15■■□□□ 1.14
CLN6-214ENST00000636314 MTMR2Q13614 643 aa22.15■■□□□ 1.14
CLN6-214ENST00000636314 SHROOM1Q2M3G4 852 aaPredicted RBP22.15■■□□□ 1.14
CLN6-214ENST00000636314 WDR18Q9BV38 432 aa22.15■■□□□ 1.14
CLN6-214ENST00000636314 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.15■■□□□ 1.144e-8■■■■□ 25.2
CLN6-214ENST00000636314 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
CLN6-214ENST00000636314 MYH8P13535 1937 aa22.15■■□□□ 1.14
CLN6-214ENST00000636314 PLXNB2O15031 1838 aa22.15■■□□□ 1.14
CLN6-214ENST00000636314 CHGBP05060 677 aa22.14■■□□□ 1.13
CLN6-214ENST00000636314 PLCD1P51178 756 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms