RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 SASH1O94885 1247 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 ERCC3P19447 782 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 SLFNL1Q499Z3 407 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 TAF3Q5VWG9 929 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 EP400NLQ6ZTU2 488 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 IFNL3Q8IZI9 196 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 IBTKQ9P2D0 1353 aaPredicted RBP16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 CELF2O95319 508 aaKnown RBP16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 PTGS1P23219 599 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 NSMFQ6X4W1 530 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 CSRNP1Q96S65 589 aa16.23■□□□□ 0.19
NEDD4L-238ENST00000635997 BACH1O14867 736 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 CCNA1P78396 465 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 ADCK5Q3MIX3 580 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 GOLGA8HP0CJ92 632 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 TRIM21P19474 475 aaKnown RBP16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 ARID5AQ03989 594 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 CCDC186Q7Z3E2 898 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 FGFR1OPO95684 399 aaKnown RBP16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 BMP15O95972 392 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 IGKV5-2P06315 115 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 MICALL2Q8IY33 904 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 TAF4BQ92750 862 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 HAUS7Q99871 368 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 TTC12Q9H892 705 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 ZBED4O75132 1171 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 TYRO3Q06418 890 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
NEDD4L-238ENST00000635997 TXKP42681 527 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 DIP2AQ14689 1571 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 UBXN4Q92575 508 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 E9PCH4 1651 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 PPARAQ07869 468 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 TEX35Q5T0J7 233 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 ACBD3Q9H3P7 528 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 VGLL3A8MV65 326 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 PKP1Q13835 747 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 ZNF589Q86UQ0 364 aaPredicted RBP16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 SMAP1Q8IYB5 467 aaPredicted RBP16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 FAM200AQ8TCP9 573 aa16.21■□□□□ 0.19
NEDD4L-238ENST00000635997 AOX1Q06278 1338 aa16.21■□□□□ 0.18
NEDD4L-238ENST00000635997 KRT40Q6A162 431 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 DEXIO95424 95 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 YEATS4O95619 227 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 CFBP00751 764 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 LUZP1Q86V48 1076 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 SPAG5Q96R06 1193 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 SPHKAPQ2M3C7 1700 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 AKR1B10O60218 316 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 NOP2P46087 812 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 MKRN1Q9UHC7 482 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 PRKAB2O43741 272 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 GYS1P13807 737 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 FAM47CQ5HY64 1035 aa16.2■□□□□ 0.18
NEDD4L-238ENST00000635997 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 HOXD10P28358 340 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 DIXDC1Q155Q3 683 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 MIGA2Q7L4E1 593 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 PSMA7O14818 248 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 CETN1Q12798 172 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 BRAPQ7Z569 592 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 LRRC47Q8N1G4 583 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 LAMC1P11047 1609 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 ZC3H13Q5T200 1668 aaKnown RBP16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 SLIT1O75093 1534 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 NEFHP12036 1026 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 OSBPP22059 807 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
NEDD4L-238ENST00000635997 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 ZNF654Q8IZM8 581 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 NRXN1Q9ULB1 1477 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 DDX39AO00148 427 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 GADD45BO75293 160 aaPredicted RBP16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 BTDP43251 543 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 GPIHBP1Q8IV16 184 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 SP8Q8IXZ3 490 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 TPCN1Q9ULQ1 816 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 KIF5CO60282 957 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 MYO3AQ8NEV4 1616 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 CCDC174Q6PII3 467 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 APOBEC3FQ8IUX4 373 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 ZBTB9Q96C00 473 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 DSCC1Q9BVC3 393 aa16.18■□□□□ 0.18
NEDD4L-238ENST00000635997 TMCO5BA8MYB1 307 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms