RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 AKAP2Q9Y2D5 859 aa4.25□□□□□ -1.73
PSPC1-208ENST00000635562 FBXO24O75426 580 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 HCLS1P14317 486 aaPredicted RBP4.24□□□□□ -1.73
PSPC1-208ENST00000635562 GARTP22102 1010 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 CLCN7P51798 805 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 KCNMB1Q16558 191 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 ZNF394Q53GI3 561 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 SCARA3Q6AZY7 606 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 TPTE2Q6XPS3 522 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.24□□□□□ -1.73
PSPC1-208ENST00000635562 KCT2Q8NC54 265 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 WDR89Q96FK6 387 aaPredicted RBP4.24□□□□□ -1.73
PSPC1-208ENST00000635562 TOX2Q96NM4 488 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 CEP44Q9C0F1 390 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 COPRSQ9NQ92 184 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 USP35Q9P2H5 1018 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 ADAMTS6Q9UKP5 1117 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.24□□□□□ -1.73
PSPC1-208ENST00000635562 SAMM50Q9Y512 469 aa4.24□□□□□ -1.73
PSPC1-208ENST00000635562 LRRC10BA6NIK2 292 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 PAGE1O75459 146 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 BMP6P22004 513 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 NME2P22392 152 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 RPS26P62854 115 aaKnown RBP4.23□□□□□ -1.73
PSPC1-208ENST00000635562 CCDC85BQ15834 202 aaPredicted RBP4.23□□□□□ -1.73
PSPC1-208ENST00000635562 ZNF124Q15973 351 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 ZC3H12AQ5D1E8 599 aaKnown RBP4.23□□□□□ -1.73
PSPC1-208ENST00000635562 RASIP1Q5U651 963 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 SPOCD1Q6ZMY3 1216 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 PDZD3Q86UT5 571 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 USP48Q86UV5 1035 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 SULF2Q8IWU5 870 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 ZNF654Q8IZM8 581 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 TOP6BLQ8N6T0 577 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 SLC43A3Q8NBI5 491 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 KCNB2Q92953 911 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 CCDC120Q96HB5 630 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 ACBD3Q9H3P7 528 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 KBTBD4Q9NVX7 518 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 CACNA2D2Q9NY47 1150 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 GGT7Q9UJ14 662 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 PCDHGB7Q9Y5F8 929 aa4.23□□□□□ -1.73
PSPC1-208ENST00000635562 GNAT3A8MTJ3 354 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 TSPAN15O95858 294 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 RLBP1P12271 317 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 ARNTP27540 789 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 AFMP43652 599 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 GJA8P48165 433 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 LIG3P49916 1009 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 ZNF252P-AS1Q0IIN9 211 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 IKZF1Q13422 519 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 PWP1Q13610 501 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 NAALADL2Q58DX5 795 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 AGMOQ6ZNB7 445 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 TICAM2Q86XR7 235 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 PHC3Q8NDX5 983 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 ZSCAN18Q8TBC5 510 aaPredicted RBP4.22□□□□□ -1.73
PSPC1-208ENST00000635562 STK35Q8TDR2 534 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 ISL2Q96A47 359 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 ACSBG1Q96GR2 724 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 TMEM74Q96NL1 305 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 ZC3H12CQ9C0D7 883 aaKnown RBP4.22□□□□□ -1.73
PSPC1-208ENST00000635562 LMCD1Q9NZU5 365 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 ADAMTS1Q9UHI8 967 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 PLAGL2Q9UPG8 496 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 MAPK8IP1Q9UQF2 711 aa4.22□□□□□ -1.73
PSPC1-208ENST00000635562 FANCGO15287 622 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 GREM1O60565 184 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 LEFTY1O75610 366 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 NEFMP07197 916 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 TFE3P19532 575 aaPredicted RBP4.21□□□□□ -1.74
PSPC1-208ENST00000635562 ITIH2P19823 946 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 RAP1GAPP47736 663 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 TNNI2P48788 182 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 ZNF157P51786 506 aaPredicted RBP4.21□□□□□ -1.74
PSPC1-208ENST00000635562 LMNB2Q03252 620 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 ZP2Q05996 745 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 MESP2Q0VG99 397 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 PCNX4Q63HM2 1172 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 TTBK2Q6IQ55 1244 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 RELL1Q8IUW5 271 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 RASGRP4Q8TDF6 673 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 GMLQ99445 158 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 PRDM10Q9NQV6 1147 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 PICK1Q9NRD5 415 aa4.21□□□□□ -1.74
PSPC1-208ENST00000635562 CLSTN1O94985 981 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 PF4P02776 101 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 MAP1SQ66K74 1059 aaPredicted RBP4.2□□□□□ -1.74
PSPC1-208ENST00000635562 ZNF746Q6NUN9 644 aaPredicted RBP4.2□□□□□ -1.74
PSPC1-208ENST00000635562 FBXL19Q6PCT2 694 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 C22orf34Q6ZV56 151 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 CDC37L1Q7L3B6 337 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 CCDC84Q86UT8 332 aaPredicted RBP4.2□□□□□ -1.74
PSPC1-208ENST00000635562 CERS3Q8IU89 383 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 SIAH1Q8IUQ4 282 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 SPACA3Q8IXA5 215 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 GAL3ST3Q96A11 431 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 FOXQ1Q9C009 403 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 CCSER2Q9H7U1 834 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms