RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 TMTC1Q8IUR5 882 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 FAM114A2Q9NRY5 505 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 SMIM23A6NLE4 172 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 ASIC1P78348 528 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 WTAPQ15007 396 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 POTEAQ6S8J7 498 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 CLSTN2Q9H4D0 955 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 EFCC1Q9HA90 598 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 GNAQP50148 359 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 AK2P54819 239 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 PDE4BQ07343 736 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 MCMDC2Q4G0Z9 681 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 Q6ZUG5 572 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 PAXIP1Q6ZW49 1069 aaPredicted RBP9.81□□□□□ -0.84
PATJ-216ENST00000635214 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
PATJ-216ENST00000635214 ZWINTO95229 277 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 PPP1R7Q15435 360 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 VWA3BQ502W6 1294 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 CSRNP2Q9H175 543 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 MED4Q9NPJ6 270 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 TSKSQ9UJT2 592 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 CAPN7Q9Y6W3 813 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 SLIT2O94813 1529 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 HIP1RO75146 1068 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 RLBP1P12271 317 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 IRX4P78413 519 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 CFAP157Q5JU67 520 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 PHLDB3Q6NSJ2 640 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 IGSF22Q8N9C0 903 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 IQUBQ8NA54 791 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 XAGE3Q8WTP9 111 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 DHX58Q96C10 678 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 NYXQ9GZU5 481 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 KAT14Q9H8E8 782 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 SPON1Q9HCB6 807 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 PLCB1Q9NQ66 1216 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 ATP6V0A2Q9Y487 856 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 ERBB3P21860 1342 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 PABPN1LA6NDY0 278 aaKnown RBP9.8□□□□□ -0.84
PATJ-216ENST00000635214 TRAF1Q13077 416 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 CLUL1Q15846 466 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 PLEKHF1Q96S99 279 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 VEZTQ9HBM0 779 aa9.8□□□□□ -0.84
PATJ-216ENST00000635214 RTN1Q16799 776 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 SEL1L2Q5TEA6 688 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 CCDC144CPQ8IYA2 1237 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 TBC1D31Q96DN5 1066 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 USP26Q9BXU7 913 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 HELLSQ9NRZ9 838 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 CCDC25Q86WR0 208 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 CERS3Q8IU89 383 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 ARHGEF2Q92974 986 aaKnown RBP9.79□□□□□ -0.84
PATJ-216ENST00000635214 CALML3P27482 149 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 FANCCQ00597 558 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 ZBTB17Q13105 803 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
PATJ-216ENST00000635214 SUDS3Q9H7L9 328 aaPredicted RBP9.79□□□□□ -0.84
PATJ-216ENST00000635214 TMOD2Q9NZR1 351 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 TXNDC16Q9P2K2 825 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 BCAP29Q9UHQ4 241 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 NCAPD2Q15021 1401 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 UBE3BQ7Z3V4 1068 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 ZNF622Q969S3 477 aaKnown RBP eCLIP9.79□□□□□ -0.84
PATJ-216ENST00000635214 BICD1Q96G01 975 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 NUP58Q9BVL2 599 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 NUF2Q9BZD4 464 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
PATJ-216ENST00000635214 LARSQ9P2J5 1176 aaKnown RBP9.79□□□□□ -0.84
PATJ-216ENST00000635214 SSX2IPQ9Y2D8 614 aa9.79□□□□□ -0.84
PATJ-216ENST00000635214 UTP11Q9Y3A2 253 aaKnown RBP9.79□□□□□ -0.84
PATJ-216ENST00000635214 EFCAB8A8MWE9 144 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 PTCD1O75127 700 aaKnown RBP9.78□□□□□ -0.84
PATJ-216ENST00000635214 GMNNO75496 209 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 HAND2P61296 217 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 LDHAL6AQ6ZMR3 332 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 COPS6Q7L5N1 327 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 RAB3IPQ96QF0 476 aaPredicted RBP9.78□□□□□ -0.84
PATJ-216ENST00000635214 CBX8Q9HC52 389 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 GOLGA8KD6RF30 607 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 CETN3O15182 167 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 BAG3O95817 575 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 PLCB3Q01970 1234 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 RNF40O75150 1001 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 RBM5P52756 815 aaKnown RBP eCLIP9.78□□□□□ -0.84
PATJ-216ENST00000635214 PARP10Q53GL7 1025 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 FAM71BQ8TC56 605 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 METTL22Q9BUU2 404 aaPredicted RBP9.78□□□□□ -0.84
PATJ-216ENST00000635214 CCNL1Q9UK58 526 aaPredicted RBP9.78□□□□□ -0.84
PATJ-216ENST00000635214 TSPY2A6NKD2 308 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 NDC80O14777 642 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 STX17P56962 302 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 CCDC14Q49A88 953 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 MAP3K21Q5TCX8 1036 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 VPS52Q8N1B4 723 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 MLKLQ8NB16 471 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 SMARCC2Q8TAQ2 1214 aa9.78□□□□□ -0.84
PATJ-216ENST00000635214 TFCP2L1Q9NZI6 479 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms