RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 MSL3P1P0C860 447 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 U2AF1L5P0DN76 240 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 TROVE2P10155 538 aaKnown RBP eCLIP2.15□□□□□ -2.07
TCF4-264ENST00000628391 EPB41P11171 864 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 ALADP13716 330 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 KCNA2P16389 499 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 SMARCA1P28370 1054 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 KIF5BP33176 963 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 IRAK1P51617 712 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 OXCT1P55809 520 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ARPC4P59998 168 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 VSNL1P62760 191 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 MXRA7P84157 204 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 HDLBPQ00341 1268 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 U2AF1Q01081 240 aaKnown RBP eCLIP2.15□□□□□ -2.07
TCF4-264ENST00000628391 APBA1Q02410 837 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 KIF5AQ12840 1032 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CBX3Q13185 183 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 XRCC4Q13426 336 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 STIM1Q13586 685 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 LBRQ14739 615 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 ARID5BQ14865 1188 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 SEPT2Q15019 361 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 RCN1Q15293 331 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 E2F5Q15329 346 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 INAQ16352 499 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 GNPTABQ3T906 1256 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 LONRF3Q496Y0 759 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CCDC152Q4G0S7 254 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 TBC1D10BQ4KMP7 808 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 PABPC1LQ4VXU2 614 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 LACTB2Q53H82 288 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 PPP1R15BQ5SWA1 713 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 NUTM2DQ5VT03 806 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 NAA35Q5VZE5 725 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ATF7IPQ6VMQ6 1270 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PACS1Q6VY07 963 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CCDC121Q6ZUS5 278 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 NCCRP1Q6ZVX7 275 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 UBE3BQ7Z3V4 1068 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 TMC6Q7Z403 805 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CATIPQ7Z7H3 387 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ZNF554Q86TJ5 538 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CCDC125Q86Z20 511 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 LMNTD2Q8IXW0 634 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PEX5LQ8IYB4 626 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CCDC146Q8IYE0 955 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 KIRREL3Q8IZU9 778 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ARL10Q8N8L6 244 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ZBTB8BQ8NAP8 495 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 SMC1BQ8NDV3 1235 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ANKK1Q8NFD2 765 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 NEK9Q8TD19 979 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 COG1Q8WTW3 980 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CHMP7Q8WUX9 453 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 CTNNBL1Q8WYA6 563 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 KIFC2Q96AC6 838 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 NACC2Q96BF6 587 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ZNF653Q96CK0 615 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 DHTKD1Q96HY7 919 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 MAML3Q96JK9 1138 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 AGBL1Q96MI9 1066 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ZNF570Q96NI8 536 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CCDC85AQ96PX6 553 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 PNKPQ96T60 521 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 SH3GL2Q99962 352 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 OXCT2Q9BYC2 517 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 UBE2OQ9C0C9 1292 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 IRF2BPLQ9H1B7 796 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 DNAJC25Q9H1X3 360 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 BHMT2Q9H2M3 363 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 VCX3BQ9H321 246 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 RABEP2Q9H5N1 569 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 NOD2Q9HC29 1040 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ARHGEF10LQ9HCE6 1279 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PCDH18Q9HCL0 1135 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 VCX3AQ9NNX9 186 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ABCB6Q9NP58 842 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 DMAP1Q9NPF5 467 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 PICK1Q9NRD5 415 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ZBTB40Q9NUA8 1239 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 EXOC1Q9NV70 894 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 HAUS2Q9NVX0 235 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ANO10Q9NW15 660 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 AATFQ9NY61 560 aaKnown RBP eCLIP2.15□□□□□ -2.07
TCF4-264ENST00000628391 DDX25Q9UHL0 483 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 CROTQ9UKG9 612 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 RABL2BQ9UNT1 228 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 IQSEC3Q9UPP2 1182 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 ZNF148Q9UQR1 794 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ITM2BQ9Y287 266 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ATP6V0A2Q9Y487 856 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CTDP1Q9Y5B0 961 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 N6AMT1Q9Y5N5 214 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 DMRT2Q9Y5R5 561 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 BZW2Q9Y6E2 419 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 SLC4A7Q9Y6M7 1214 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CAMSAP1Q5T5Y3 1602 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PREX2Q70Z35 1606 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 SETD1BQ9UPS6 1966 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms