RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 APPP05067 770 aa16.55■□□□□ 0.24
MECP2-217ENST00000628176 TOB2Q14106 344 aaPredicted RBP16.55■□□□□ 0.24
MECP2-217ENST00000628176 PRAMEF18Q5VWM3 479 aa16.55■□□□□ 0.24
MECP2-217ENST00000628176 RBM43Q6ZSC3 357 aaKnown RBP16.55■□□□□ 0.24
MECP2-217ENST00000628176 DSCC1Q9BVC3 393 aa16.55■□□□□ 0.24
MECP2-217ENST00000628176 EPB41L4AQ9HCS5 686 aaPredicted RBP16.55■□□□□ 0.24
MECP2-217ENST00000628176 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
MECP2-217ENST00000628176 FAM198AQ9UFP1 575 aa16.55■□□□□ 0.24
MECP2-217ENST00000628176 MYH1P12882 1939 aa16.54■□□□□ 0.24
MECP2-217ENST00000628176 CYP2D7A0A087X1C5 515 aa16.54■□□□□ 0.24
MECP2-217ENST00000628176 HSPD1P10809 573 aaKnown RBP16.54■□□□□ 0.24
MECP2-217ENST00000628176 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
MECP2-217ENST00000628176 PRIMPOLQ96LW4 560 aa16.54■□□□□ 0.24
MECP2-217ENST00000628176 FOCADQ5VW36 1801 aa16.54■□□□□ 0.24
MECP2-217ENST00000628176 IQCA1LA6NCM1 817 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 CYP2D6P10635 497 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 PLCG2P16885 1265 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 USP5P45974 858 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 MMP14P50281 582 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 LARP6Q9BRS8 491 aaKnown RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 FLT1P17948 1338 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 VPS37CA5D8V6 355 aaPredicted RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 CAVIN2O95810 425 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 TTC6Q86TZ1 520 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 STK11IPQ8N1F8 1099 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
MECP2-217ENST00000628176 DCP1AQ9NPI6 582 aaPredicted RBP16.53■□□□□ 0.24
MECP2-217ENST00000628176 CNTNAP1P78357 1384 aa16.52■□□□□ 0.24
MECP2-217ENST00000628176 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.24
MECP2-217ENST00000628176 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.24
MECP2-217ENST00000628176 FMR1Q06787 632 aaKnown RBP eCLIP16.52■□□□□ 0.242e-6■□□□□ 8.4
MECP2-217ENST00000628176 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
MECP2-217ENST00000628176 SH3BP5LQ7L8J4 393 aa16.52■□□□□ 0.24
MECP2-217ENST00000628176 NECAB1Q8N987 351 aa16.52■□□□□ 0.24
MECP2-217ENST00000628176 FAM200AQ8TCP9 573 aa16.52■□□□□ 0.24
MECP2-217ENST00000628176 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
MECP2-217ENST00000628176 NACAP1Q9BZK3 213 aa16.52■□□□□ 0.24
MECP2-217ENST00000628176 GPBP1L1Q9HC44 474 aaPredicted RBP16.52■□□□□ 0.24
MECP2-217ENST00000628176 ADM5C9JUS6 153 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 MYO1BO43795 1136 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
MECP2-217ENST00000628176 GIMAP6Q6P9H5 292 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 NUP62CLQ9H1M0 184 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 ZSCAN16Q9H4T2 348 aaPredicted RBP16.51■□□□□ 0.23
MECP2-217ENST00000628176 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
MECP2-217ENST00000628176 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
MECP2-217ENST00000628176 UQCRHLA0A096LP55 91 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 DDTLA6NHG4 134 aaPredicted RBP16.5■□□□□ 0.23
MECP2-217ENST00000628176 FGAP02671 866 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 UQCRHP07919 91 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 NEK1Q96PY6 1258 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 IDI2Q9BXS1 227 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 TAF6LQ9Y6J9 622 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 GOLGA6L6A8MZA4 724 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.232e-7■■□□□ 12.5
MECP2-217ENST00000628176 PLCD1P51178 756 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 HAND2P61296 217 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 RASA3Q14644 834 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.23
MECP2-217ENST00000628176 GLIS2Q9BZE0 524 aaPredicted RBP16.5■□□□□ 0.23
MECP2-217ENST00000628176 INCENPQ9NQS7 918 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 TMOD2Q9NZR1 351 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 FZD1Q9UP38 647 aa16.5■□□□□ 0.23
MECP2-217ENST00000628176 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 USP17L12C9JPN9 530 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 USP17L21D6R901 530 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 TDO2P48775 406 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 ALX1Q15699 326 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 ATL3Q6DD88 541 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 CTR9Q6PD62 1173 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
MECP2-217ENST00000628176 MYRIPQ8NFW9 859 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 OSBPL5Q9H0X9 879 aaPredicted RBP16.49■□□□□ 0.23
MECP2-217ENST00000628176 DEFB129Q9H1M3 183 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 ATP8A2Q9NTI2 1148 aa16.49■□□□□ 0.23
MECP2-217ENST00000628176 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 PNMA8AQ86V59 439 aaPredicted RBP16.48■□□□□ 0.23
MECP2-217ENST00000628176 ZSCAN29Q8IWY8 852 aaPredicted RBP16.48■□□□□ 0.23
MECP2-217ENST00000628176 SMARCC2Q8TAQ2 1214 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 LEO1Q8WVC0 666 aaPredicted RBP16.48■□□□□ 0.23
MECP2-217ENST00000628176 DYNLL2Q96FJ2 89 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 AGXT2Q9BYV1 514 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 NAPBQ9H115 298 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 TACC3Q9Y6A5 838 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 LAMA4Q16363 1823 aa16.48■□□□□ 0.23
MECP2-217ENST00000628176 DDX60LQ5H9U9 1706 aaKnown RBP16.48■□□□□ 0.23
MECP2-217ENST00000628176 TRAF5O00463 557 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms