RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 DNAJC2Q99543 621 aaKnown RBP11.46□□□□□ -0.57
CHD2-210ENST00000627200 WDR18Q9BV38 432 aa11.46□□□□□ -0.57
CHD2-210ENST00000627200 RNF208Q9H0X6 261 aa11.46□□□□□ -0.57
CHD2-210ENST00000627200 AS3MTQ9HBK9 375 aa11.46□□□□□ -0.57
CHD2-210ENST00000627200 DOCK3Q8IZD9 2030 aa11.46□□□□□ -0.57
CHD2-210ENST00000627200 PLXNB2O15031 1838 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 GOLIM4O00461 696 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 GH2P01242 217 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 HLA-DOAP06340 250 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 ASNSP08243 561 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 PDE6AP16499 860 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 MAP3K12Q12852 859 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
CHD2-210ENST00000627200 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
CHD2-210ENST00000627200 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 TXNRD2Q9NNW7 524 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 RCAN3Q9UKA8 241 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 DDX19BQ9UMR2 479 aa11.45□□□□□ -0.58
CHD2-210ENST00000627200 CEP290O15078 2479 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 H0YGN5 161 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 CHGBP05060 677 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 GJB1P08034 283 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 GJA8P48165 433 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 PLCD1P51178 756 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 UBXN2AP68543 259 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 IRX3P78415 501 aaPredicted RBP11.44□□□□□ -0.58
CHD2-210ENST00000627200 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
CHD2-210ENST00000627200 HSP90AB4PQ58FF6 505 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 POTEEQ6S8J3 1075 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 UBE2Q1Q7Z7E8 422 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 CLASRPQ8N2M8 674 aaKnown RBP11.44□□□□□ -0.58
CHD2-210ENST00000627200 U2AF1L4Q8WU68 220 aaKnown RBP11.44□□□□□ -0.58
CHD2-210ENST00000627200 KIF1BPQ96EK5 621 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 P2RX7Q99572 595 aaKnown RBP11.44□□□□□ -0.58
CHD2-210ENST00000627200 TMOD4Q9NZQ9 345 aa11.44□□□□□ -0.58
CHD2-210ENST00000627200 ZNF532Q9HCE3 1301 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 MAGEB6P1A0A0J9YX57 407 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 TCRBV5S4A2TA0A5A2 114 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 USP17L10C9JJH3 530 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 IFIT2P09913 472 aaKnown RBP11.43□□□□□ -0.58
CHD2-210ENST00000627200 MS4A1P11836 297 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 SHMT1P34896 483 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 GCLCP48506 637 aaPredicted RBP11.43□□□□□ -0.58
CHD2-210ENST00000627200 HERVK_113P62684 666 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 TRIM32Q13049 653 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 PABPC4Q13310 644 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHD2-210ENST00000627200 IRF5Q13568 498 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 HABP4Q5JVS0 413 aaKnown RBP11.43□□□□□ -0.58
CHD2-210ENST00000627200 SLC9C2Q5TAH2 1124 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 RPAP2Q8IXW5 612 aaPredicted RBP11.43□□□□□ -0.58
CHD2-210ENST00000627200 LCORLQ8N3X6 602 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 PXYLP1Q8TE99 480 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 COA7Q96BR5 231 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 SERPINB13Q9UIV8 391 aa11.43□□□□□ -0.58
CHD2-210ENST00000627200 IGSF3O75054 1194 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 HMMRO75330 724 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 FARP2O94887 1054 aaPredicted RBP11.42□□□□□ -0.58
CHD2-210ENST00000627200 CYP2D6P10635 497 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 HOXA7P31268 230 aaPredicted RBP11.42□□□□□ -0.58
CHD2-210ENST00000627200 RAB3GAP1Q15042 981 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 TATDN1Q6P1N9 297 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 SLC44A5Q8NCS7 719 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 ACER1Q8TDN7 264 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 SDR42E1Q8WUS8 393 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 DEFB118Q96PH6 123 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 FEZ1Q99689 392 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 EHD4Q9H223 541 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 BOLA2Q9H3K6 86 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 MORF4L1Q9UBU8 362 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 GJD2Q9UKL4 321 aa11.42□□□□□ -0.58
CHD2-210ENST00000627200 C19orf81C9J6K1 198 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 SMIM22K7EJ46 135 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 SMARCA5O60264 1052 aaPredicted RBP11.41□□□□□ -0.58
CHD2-210ENST00000627200 SGPL1O95470 568 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 TTF1Q15361 905 aaPredicted RBP11.41□□□□□ -0.58
CHD2-210ENST00000627200 ABCB5Q2M3G0 1257 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 CERS3Q8IU89 383 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 TRIB2Q92519 343 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 GCC1Q96CN9 775 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 PORCNQ9H237 461 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 ARMT1Q9H993 441 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 PAK6Q9NQU5 681 aaPredicted RBP11.41□□□□□ -0.58
CHD2-210ENST00000627200 MCM9Q9NXL9 1143 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
CHD2-210ENST00000627200 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
CHD2-210ENST00000627200 PRKAB2O43741 272 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 RAB11FIP3O75154 756 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 MBD4O95243 580 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
CHD2-210ENST00000627200 VCAM1P19320 739 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 CYP2B6P20813 491 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 GABPAQ06546 454 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 Q3C1V9 767 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 CERKLQ49MI3 558 aaPredicted RBP11.4□□□□□ -0.58
CHD2-210ENST00000627200 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
CHD2-210ENST00000627200 TTC6Q86TZ1 520 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms