RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 PRDM9Q9NQV7 894 aa9.87□□□□□ -0.83
CHD2-209ENST00000627185 ANO10Q9NW15 660 aa9.87□□□□□ -0.83
CHD2-209ENST00000627185 BTG4Q9NY30 223 aa9.87□□□□□ -0.83
CHD2-209ENST00000627185 TIAM2Q8IVF5 1701 aa9.87□□□□□ -0.83
CHD2-209ENST00000627185 NWD2Q9ULI1 1742 aa9.87□□□□□ -0.83
CHD2-209ENST00000627185 LAMA4Q16363 1823 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 WNK3Q9BYP7 1800 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 PATL2C9JE40 543 aaKnown RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 SH2B2O14492 632 aaPredicted RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 CMA1P23946 247 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD2-209ENST00000627185 ABL2P42684 1182 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 FKBP4Q02790 459 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD2-209ENST00000627185 STK3Q13188 491 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 SCARF1Q14162 830 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 NR6A1Q15406 480 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 HLFQ16534 295 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 FOXD4L6Q3SYB3 417 aaPredicted RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 CCDC102BQ68D86 513 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 FOXD4L3Q6VB84 417 aaPredicted RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 MYRIPQ8NFW9 859 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 BICD2Q8TD16 824 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 MRPS27Q92552 414 aaKnown RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 SMARCC1Q92922 1105 aaPredicted RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 USP28Q96RU2 1077 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 CDC5LQ99459 802 aaKnown RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 PDCL3Q9H2J4 239 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 TRMT112Q9UI30 125 aaKnown RBP9.86□□□□□ -0.83
CHD2-209ENST00000627185 ANAPC4Q9UJX5 808 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 MYH3P11055 1940 aa9.86□□□□□ -0.83
CHD2-209ENST00000627185 COL16A1Q07092 1604 aaPredicted RBP9.85□□□□□ -0.83
CHD2-209ENST00000627185 ZNF804BA4D1E1 1349 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 AP5Z1O43299 807 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 KINO60870 393 aaKnown RBP9.85□□□□□ -0.83
CHD2-209ENST00000627185 ITGBL1O95965 494 aaPredicted RBP9.85□□□□□ -0.83
CHD2-209ENST00000627185 TUBB4AP04350 444 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 CHGBP05060 677 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 CCNYL3P0C7X3 344 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 SLC5A1P13866 664 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 PDE6AP16499 860 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 ZNF75DP51815 510 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 MAP3K12Q12852 859 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 SLC39A14Q15043 492 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 ANO6Q4KMQ2 910 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 INTS5Q6P9B9 1019 aaKnown RBP9.85□□□□□ -0.83
CHD2-209ENST00000627185 DZIP3Q86Y13 1208 aaKnown RBP9.85□□□□□ -0.83
CHD2-209ENST00000627185 CCAR1Q8IX12 1150 aaKnown RBP9.85□□□□□ -0.83
CHD2-209ENST00000627185 JMYQ8N9B5 988 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 IGDCC4Q8TDY8 1250 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 C8orf76Q96K31 380 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 KRT23Q9C075 422 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 NAT10Q9H0A0 1025 aaKnown RBP9.85□□□□□ -0.83
CHD2-209ENST00000627185 STRN4Q9NRL3 753 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 ZBTB1Q9Y2K1 713 aa9.85□□□□□ -0.83
CHD2-209ENST00000627185 SPATA31A1Q5TZJ5 1347 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 UBN2Q6ZU65 1347 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 MYH7P12883 1935 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 LAMB2P55268 1798 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 KLF18A0A0U1RQI7 1052 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 IKBKBO14920 756 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 CAMTA2O94983 1202 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 FGRP09769 529 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 KIF23Q02241 960 aaPredicted RBP9.84□□□□□ -0.83
CHD2-209ENST00000627185 IRF5Q13568 498 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 SF3B3Q15393 1217 aaKnown RBP9.84□□□□□ -0.83
CHD2-209ENST00000627185 SYCP1Q15431 976 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 NTRK3Q16288 839 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 CCDC152Q4G0S7 254 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 CT47A1Q5JQC4 288 aaPredicted RBP9.84□□□□□ -0.83
CHD2-209ENST00000627185 AXDND1Q5T1B0 1012 aaPredicted RBP9.84□□□□□ -0.83
CHD2-209ENST00000627185 SLC9C2Q5TAH2 1124 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 TTLL5Q6EMB2 1281 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 FAM173BQ6P4H8 233 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 APOA5Q6Q788 366 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 STAG1Q8WVM7 1258 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 WASF1Q92558 559 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 UTP14AQ9BVJ6 771 aaKnown RBP9.84□□□□□ -0.83
CHD2-209ENST00000627185 SLC6A16Q9GZN6 736 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 CNNM1Q9NRU3 951 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 IMPACTQ9P2X3 320 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 ORC3Q9UBD5 711 aaPredicted RBP9.84□□□□□ -0.83
CHD2-209ENST00000627185 HPSEQ9Y251 543 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 BCL9LQ86UU0 1499 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 DOCK2Q92608 1830 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
CHD2-209ENST00000627185 NEDD4P46934 1319 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 CCDC196A0A1B0GTZ2 297 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 GOLGA8BA8MQT2 603 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 CPLX1O14810 134 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 IFNAR1P17181 557 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 UBE4AQ14139 1066 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 SLC10A5Q5PT55 438 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 CEP57L1Q8IYX8 460 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 SPATA5Q8NB90 893 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 NKX2-3Q8TAU0 364 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 DDX11Q96FC9 970 aa9.83□□□□□ -0.84
CHD2-209ENST00000627185 NUDT12Q9BQG2 462 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms